Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_J02
(346 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal prot... 198 2e-51
L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal prot... 198 2e-51
L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal prot... 198 2e-51
L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal prot... 198 2e-51
AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-P... 198 2e-51
AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-P... 194 3e-50
L02074-3|AAB05984.1| 200|Drosophila melanogaster protein ( Dros... 162 1e-40
L02074-2|AAB05983.1| 200|Drosophila melanogaster protein ( Dros... 162 1e-40
AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p pro... 132 9e-32
AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-P... 132 9e-32
AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-P... 31 0.53
AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-P... 31 0.53
AE014298-854|AAF46133.1| 1399|Drosophila melanogaster CG14446-PA... 31 0.53
BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p pro... 29 2.1
BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p pro... 29 2.1
U19269-5|AAC46510.1| 1065|Drosophila melanogaster Dachshund vari... 27 8.7
U19269-4|AAC46509.1| 1072|Drosophila melanogaster Dachshund vari... 27 8.7
U19269-3|AAC46508.1| 1072|Drosophila melanogaster Dachshund vari... 27 8.7
U19269-2|AAC46507.1| 1074|Drosophila melanogaster Dachshund vari... 27 8.7
U19269-1|AAC46506.1| 1081|Drosophila melanogaster Dachshund prot... 27 8.7
AE014134-2727|AAN10945.1| 1081|Drosophila melanogaster CG4952-PE... 27 8.7
AE014134-2726|AAN10944.1| 1081|Drosophila melanogaster CG4952-PB... 27 8.7
AE014134-2725|AAN10943.1| 1074|Drosophila melanogaster CG4952-PD... 27 8.7
AE014134-2724|AAX52668.1| 1072|Drosophila melanogaster CG4952-PF... 27 8.7
AE014134-2723|AAF53538.3| 1072|Drosophila melanogaster CG4952-PA... 27 8.7
AE014134-2722|AAN10942.1| 1065|Drosophila melanogaster CG4952-PC... 27 8.7
AE014134-2721|AAX52667.1| 1063|Drosophila melanogaster CG4952-PG... 27 8.7
>L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 198 bits (483), Expect = 2e-51
Identities = 89/102 (87%), Positives = 95/102 (93%)
Frame = +1
Query: 40 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGCNDKQG 219
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AG NDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 220 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIV 345
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIV
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIV 102
>L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 198 bits (483), Expect = 2e-51
Identities = 89/102 (87%), Positives = 95/102 (93%)
Frame = +1
Query: 40 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGCNDKQG 219
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AG NDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 220 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIV 345
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIV
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIV 102
>L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 198 bits (483), Expect = 2e-51
Identities = 89/102 (87%), Positives = 95/102 (93%)
Frame = +1
Query: 40 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGCNDKQG 219
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AG NDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 220 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIV 345
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIV
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIV 102
>L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 198 bits (483), Expect = 2e-51
Identities = 89/102 (87%), Positives = 95/102 (93%)
Frame = +1
Query: 40 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGCNDKQG 219
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AG NDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 220 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIV 345
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIV
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIV 102
>AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-PB,
isoform B protein.
Length = 248
Score = 198 bits (483), Expect = 2e-51
Identities = 89/102 (87%), Positives = 95/102 (93%)
Frame = +1
Query: 40 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGCNDKQG 219
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AG NDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 220 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIV 345
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIV
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIV 102
>AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-PC,
isoform C protein.
Length = 251
Score = 194 bits (473), Expect = 3e-50
Identities = 87/100 (87%), Positives = 93/100 (93%)
Frame = +1
Query: 46 LNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGCNDKQGFP 225
LNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AG NDKQGFP
Sbjct: 6 LNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFP 65
Query: 226 MKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIV 345
MKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIV
Sbjct: 66 MKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIV 105
>L02074-3|AAB05984.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 162 bits (393), Expect = 1e-40
Identities = 76/98 (77%), Positives = 85/98 (86%)
Frame = +1
Query: 40 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGCNDKQG 219
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AG NDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 220 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 333
FPMKQGVLT+ R+RLL K HSC+ PR + RK K+VR
Sbjct: 61 FPMKQGVLTHGRLRLL-KKIHSCFHPRCNKVRKCKTVR 97
>L02074-2|AAB05983.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 162 bits (393), Expect = 1e-40
Identities = 76/98 (77%), Positives = 85/98 (86%)
Frame = +1
Query: 40 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGCNDKQG 219
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AG NDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 220 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 333
FPMKQGVLT+ R+RLL K HSC+ PR + RK K+VR
Sbjct: 61 FPMKQGVLTHGRLRLL-KKIHSCFHPRCNKVRKCKTVR 97
>AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p
protein.
Length = 217
Score = 132 bits (320), Expect = 9e-32
Identities = 59/71 (83%), Positives = 64/71 (90%)
Frame = +1
Query: 133 MGAEVDADLLGDEWKGYVLRVAGCNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 312
MG V+AD+LGDEWKGY LR+AG NDKQGFPMKQGVLT+ RVRLL+ KGHSCYRPRR GE
Sbjct: 1 MGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGE 60
Query: 313 RKRKSVRGCIV 345
RKRKSVRGCIV
Sbjct: 61 RKRKSVRGCIV 71
>AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-PA,
isoform A protein.
Length = 217
Score = 132 bits (320), Expect = 9e-32
Identities = 59/71 (83%), Positives = 64/71 (90%)
Frame = +1
Query: 133 MGAEVDADLLGDEWKGYVLRVAGCNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 312
MG V+AD+LGDEWKGY LR+AG NDKQGFPMKQGVLT+ RVRLL+ KGHSCYRPRR GE
Sbjct: 1 MGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGE 60
Query: 313 RKRKSVRGCIV 345
RKRKSVRGCIV
Sbjct: 61 RKRKSVRGCIV 71
>AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-PA
protein.
Length = 135
Score = 30.7 bits (66), Expect = 0.53
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +1
Query: 247 NSRVRLLMSKGHSCYRPRRDGERKRKSVR 333
N R+RLL K HSC+ PR + RK K+VR
Sbjct: 5 NRRLRLL-KKIHSCFHPRCNKVRKCKTVR 32
>AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-PA
protein.
Length = 135
Score = 30.7 bits (66), Expect = 0.53
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +1
Query: 247 NSRVRLLMSKGHSCYRPRRDGERKRKSVR 333
N R+RLL K HSC+ PR + RK K+VR
Sbjct: 5 NRRLRLL-KKIHSCFHPRCNKVRKCKTVR 32
>AE014298-854|AAF46133.1| 1399|Drosophila melanogaster CG14446-PA
protein.
Length = 1399
Score = 30.7 bits (66), Expect = 0.53
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -1
Query: 217 PACRYSRQHGEHNLSIRRLEDLHQLQRPYAFHRRYGACAHPPLQ 86
PA ++QH +H L+ R ++ + P HR GA A P+Q
Sbjct: 1035 PASNLNKQHADHYLANERKDNALDYKPPVPPHRNVGARACLPVQ 1078
>BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p
protein.
Length = 149
Score = 28.7 bits (61), Expect = 2.1
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +1
Query: 253 RVRLLMSKGHSCYRPRRDGERKRKSVR 333
R+RLL K HSC+ PR + RK K+VR
Sbjct: 21 RLRLL-KKIHSCFHPRCNKVRKCKTVR 46
>BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p
protein.
Length = 147
Score = 28.7 bits (61), Expect = 2.1
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +1
Query: 253 RVRLLMSKGHSCYRPRRDGERKRKSVR 333
R+RLL K HSC+ PR + RK K+VR
Sbjct: 19 RLRLL-KKIHSCFHPRCNKVRKCKTVR 44
>U19269-5|AAC46510.1| 1065|Drosophila melanogaster Dachshund variant
4 protein.
Length = 1065
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 88 EVVDEHKLRIFYEKRMGAE 144
++VDE KLR+ Y+KR E
Sbjct: 782 QLVDERKLRVLYQKRFRRE 800
>U19269-4|AAC46509.1| 1072|Drosophila melanogaster Dachshund variant
3 protein.
Length = 1072
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 88 EVVDEHKLRIFYEKRMGAE 144
++VDE KLR+ Y+KR E
Sbjct: 789 QLVDERKLRVLYQKRFRRE 807
>U19269-3|AAC46508.1| 1072|Drosophila melanogaster Dachshund variant
2 protein.
Length = 1072
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 88 EVVDEHKLRIFYEKRMGAE 144
++VDE KLR+ Y+KR E
Sbjct: 789 QLVDERKLRVLYQKRFRRE 807
>U19269-2|AAC46507.1| 1074|Drosophila melanogaster Dachshund variant
1 protein.
Length = 1074
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 88 EVVDEHKLRIFYEKRMGAE 144
++VDE KLR+ Y+KR E
Sbjct: 791 QLVDERKLRVLYQKRFRRE 809
>U19269-1|AAC46506.1| 1081|Drosophila melanogaster Dachshund
protein.
Length = 1081
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 88 EVVDEHKLRIFYEKRMGAE 144
++VDE KLR+ Y+KR E
Sbjct: 798 QLVDERKLRVLYQKRFRRE 816
>AE014134-2727|AAN10945.1| 1081|Drosophila melanogaster CG4952-PE,
isoform E protein.
Length = 1081
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 88 EVVDEHKLRIFYEKRMGAE 144
++VDE KLR+ Y+KR E
Sbjct: 798 QLVDERKLRVLYQKRFRRE 816
>AE014134-2726|AAN10944.1| 1081|Drosophila melanogaster CG4952-PB,
isoform B protein.
Length = 1081
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 88 EVVDEHKLRIFYEKRMGAE 144
++VDE KLR+ Y+KR E
Sbjct: 798 QLVDERKLRVLYQKRFRRE 816
>AE014134-2725|AAN10943.1| 1074|Drosophila melanogaster CG4952-PD,
isoform D protein.
Length = 1074
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 88 EVVDEHKLRIFYEKRMGAE 144
++VDE KLR+ Y+KR E
Sbjct: 791 QLVDERKLRVLYQKRFRRE 809
>AE014134-2724|AAX52668.1| 1072|Drosophila melanogaster CG4952-PF,
isoform F protein.
Length = 1072
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 88 EVVDEHKLRIFYEKRMGAE 144
++VDE KLR+ Y+KR E
Sbjct: 789 QLVDERKLRVLYQKRFRRE 807
>AE014134-2723|AAF53538.3| 1072|Drosophila melanogaster CG4952-PA,
isoform A protein.
Length = 1072
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 88 EVVDEHKLRIFYEKRMGAE 144
++VDE KLR+ Y+KR E
Sbjct: 789 QLVDERKLRVLYQKRFRRE 807
>AE014134-2722|AAN10942.1| 1065|Drosophila melanogaster CG4952-PC,
isoform C protein.
Length = 1065
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 88 EVVDEHKLRIFYEKRMGAE 144
++VDE KLR+ Y+KR E
Sbjct: 782 QLVDERKLRVLYQKRFRRE 800
>AE014134-2721|AAX52667.1| 1063|Drosophila melanogaster CG4952-PG,
isoform G protein.
Length = 1063
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 88 EVVDEHKLRIFYEKRMGAE 144
++VDE KLR+ Y+KR E
Sbjct: 780 QLVDERKLRVLYQKRFRRE 798
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,526,929
Number of Sequences: 53049
Number of extensions: 305634
Number of successful extensions: 729
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 819378027
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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