Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_J01
         (414 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-8|CAD27480.1|   82|Anopheles gambiae hypothetical prote...    24   2.5  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    24   2.5  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             23   4.4  

>AJ438610-8|CAD27480.1|   82|Anopheles gambiae hypothetical protein
           protein.
          Length = 82

 Score = 23.8 bits (49), Expect = 2.5
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -3

Query: 256 ISRLVIRIPLSIGAGGTSS 200
           + RLVI IP+   A GTSS
Sbjct: 27  MKRLVIEIPIKSSACGTSS 45


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 23.8 bits (49), Expect = 2.5
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 131 GIGAVTPESIHLSAGCNGRV 72
           GIG VT  S+HL  G +  V
Sbjct: 272 GIGGVTSSSVHLHTGGHSTV 291


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 23.0 bits (47), Expect = 4.4
 Identities = 23/83 (27%), Positives = 33/83 (39%)
 Frame = -2

Query: 314  LPQEGPELFPVTRESRSGRHKSTRNSDSFVHWSGWHQLVMGY*GPELGLRELVPSARSTV 135
            +PQ     F VT ++R G  ++ R    F+ W        G      G  + +     T 
Sbjct: 1098 MPQYKLREFKVT-DARDGSSRTVRQFQ-FITWPE-----QGVPKSGQGFIDFIGQVHKTK 1150

Query: 134  EGIGAVTPESIHLSAGCNGRVDV 66
            E  G   P ++H SAG  GR  V
Sbjct: 1151 EQFGQDGPITVHCSAGV-GRTGV 1172


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 456,243
Number of Sequences: 2352
Number of extensions: 9387
Number of successful extensions: 61
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33777477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)