Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_J01
(414 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35604-3|CAA84679.1| 352|Caenorhabditis elegans Hypothetical pr... 77 4e-15
Z77655-2|CAB01136.1| 156|Caenorhabditis elegans Hypothetical pr... 29 1.0
Z82080-2|CAB04951.1| 428|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 29 1.8
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 1.8
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 1.8
Z81506-1|CAB04128.1| 555|Caenorhabditis elegans Hypothetical pr... 28 2.3
U97550-4|AAK18978.2| 773|Caenorhabditis elegans Hypothetical pr... 28 2.3
U52003-8|AAM97990.1| 441|Caenorhabditis elegans Hypothetical pr... 27 4.1
U52003-7|AAM97989.1| 555|Caenorhabditis elegans Hypothetical pr... 27 4.1
U97403-8|AAB52470.1| 720|Caenorhabditis elegans Hypothetical pr... 27 5.4
U80441-8|AAB37656.1| 284|Caenorhabditis elegans Dumpy : shorter... 27 5.4
AF016435-1|AAB65878.1| 474|Caenorhabditis elegans Hypothetical ... 27 5.4
AC084154-4|AAK29868.1| 767|Caenorhabditis elegans Hypothetical ... 27 5.4
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z50872-8|CAA90758.1| 865|Caenorhabditis elegans Hypothetical pr... 27 7.1
AL031269-3|CAA20334.1| 865|Caenorhabditis elegans Hypothetical ... 27 7.1
AB055111-1|BAB62292.1| 865|Caenorhabditis elegans VHA-6 protein. 27 7.1
>Z35604-3|CAA84679.1| 352|Caenorhabditis elegans Hypothetical
protein ZK1058.3 protein.
Length = 352
Score = 77.4 bits (182), Expect = 4e-15
Identities = 41/95 (43%), Positives = 52/95 (54%), Gaps = 8/95 (8%)
Frame = +2
Query: 62 KEHQHVRYNPLKDEWILVSPHRCLRPWSGQTEQAPEDQAPDPN------NPLRAGATRSN 223
K++ RYNPL DEW++V+ +R RPW G + + N NPL G TRS+
Sbjct: 3 KQNNFRRYNPLIDEWVIVAVNRINRPWQGAKTEKSTTISTSSNTEQSILNPLAPGGTRSS 62
Query: 224 GQRNPNYESTYVFPNDFPAL--LERVPGPPEGDNL 322
G N NY STYVF NDFP+ E G E D+L
Sbjct: 63 GIANENYVSTYVFDNDFPSFTEFEECAGKDENDDL 97
Score = 35.1 bits (77), Expect = 0.020
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 327 FESGPAKGRCRVMCFHPDSSMTLPLMTV 410
F+ KG C+V+C+HP+S +TL M V
Sbjct: 98 FKQHEVKGVCKVICYHPNSQLTLATMDV 125
>Z77655-2|CAB01136.1| 156|Caenorhabditis elegans Hypothetical
protein C56A3.2 protein.
Length = 156
Score = 29.5 bits (63), Expect = 1.0
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 167 EDQAPDPNNPLRAGATRSNGQ 229
ED PDP++ L AG T SNG+
Sbjct: 45 EDSGPDPDDLLEAGYTDSNGE 65
>Z82080-2|CAB04951.1| 428|Caenorhabditis elegans Hypothetical
protein W09G3.2 protein.
Length = 428
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -2
Query: 296 ELFPVTRESRSGRHKSTRNSDSFVHWSGWHQLVMGY*GP 180
E F VTR+S + R+ F + WH L GY P
Sbjct: 131 EEFEVTRDSENPRNTEKLERQKFCRFIVWHMLRCGYIEP 169
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 1.8
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +2
Query: 143 SGQTEQAP---EDQAPDPNNPLRAGATRSNGQRNPNYESTYVFPNDF 274
+G T Q P +DQ+PDP P R + N NP+ S F + F
Sbjct: 2057 NGYTCQCPINAKDQSPDPRKPGRICSLSVNECANPSLNSCSAFADCF 2103
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 1.8
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +2
Query: 143 SGQTEQAP---EDQAPDPNNPLRAGATRSNGQRNPNYESTYVFPNDF 274
+G T Q P +DQ+PDP P R + N NP+ S F + F
Sbjct: 2641 NGYTCQCPINAKDQSPDPRKPGRICSLSVNECANPSLNSCSAFADCF 2687
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 1.8
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +2
Query: 143 SGQTEQAP---EDQAPDPNNPLRAGATRSNGQRNPNYESTYVFPNDF 274
+G T Q P +DQ+PDP P R + N NP+ S F + F
Sbjct: 2057 NGYTCQCPINAKDQSPDPRKPGRICSLSVNECANPSLNSCSAFADCF 2103
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 1.8
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +2
Query: 143 SGQTEQAP---EDQAPDPNNPLRAGATRSNGQRNPNYESTYVFPNDF 274
+G T Q P +DQ+PDP P R + N NP+ S F + F
Sbjct: 2641 NGYTCQCPINAKDQSPDPRKPGRICSLSVNECANPSLNSCSAFADCF 2687
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.7 bits (61), Expect = 1.8
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +2
Query: 143 SGQTEQAP---EDQAPDPNNPLRAGATRSNGQRNPNYESTYVFPNDF 274
+G T Q P +DQ+PDP P R + N NP+ S F + F
Sbjct: 2641 NGYTCQCPINAKDQSPDPRKPGRICSLSVNECANPSLNSCSAFADCF 2687
>Z81506-1|CAB04128.1| 555|Caenorhabditis elegans Hypothetical
protein F16H6.1 protein.
Length = 555
Score = 28.3 bits (60), Expect = 2.3
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +2
Query: 134 RPWSGQTEQAPEDQAPDPNNPLRAGATRSNGQRNPNYESTYVFPNDFPA 280
+P + T Q P P+PNNP SN P Y S+ +PN +P+
Sbjct: 419 KPSTAVTTQPPITVTPNPNNP---SGCNSNIMA-PGYISSPNYPNYYPS 463
Score = 27.1 bits (57), Expect = 5.4
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -2
Query: 260 RHKSTRNSDSFVHWSGWHQLVMGY*GPELGL 168
+H + +NS+ ++ S W +GY P LG+
Sbjct: 229 KHSNNQNSNYWIDGSSWDYDNIGYSNPNLGM 259
>U97550-4|AAK18978.2| 773|Caenorhabditis elegans Hypothetical
protein T20F7.1 protein.
Length = 773
Score = 28.3 bits (60), Expect = 2.3
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 149 QTEQAPE--DQAPDPNNPLRAGATRSNGQRNPNYESTYVFPNDFPALLERVPGPPEGDNL 322
++E+A E ++ +P PL T++ G+R + V PA E+VP P E +
Sbjct: 642 ESEKALEVTEKKEEPVEPLTETPTKTRGRRKTTADEVAV-----PAESEKVPAPQEMEET 696
Query: 323 LFRIGS 340
++GS
Sbjct: 697 AEQVGS 702
>U52003-8|AAM97990.1| 441|Caenorhabditis elegans Hypothetical
protein ZK381.5b protein.
Length = 441
Score = 27.5 bits (58), Expect = 4.1
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Frame = +2
Query: 92 LKDEWILVSPHRCLRPWSGQTEQAPEDQAPDPNNP--LRAGATRSNGQRNPNYESTYVFP 265
L DE L SPHR + S + + P P +P ++ T + + P+ V
Sbjct: 254 LLDEDRLGSPHRKVTQKSTKVVRIPASPRVAPRHPHVIQQNLTTTMTIQKPSV----VIQ 309
Query: 266 NDFPALLERVPGPPEGDNL 322
N P +R P PP +N+
Sbjct: 310 NQRPKPPQRAPPPPPSENI 328
>U52003-7|AAM97989.1| 555|Caenorhabditis elegans Hypothetical
protein ZK381.5a protein.
Length = 555
Score = 27.5 bits (58), Expect = 4.1
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Frame = +2
Query: 92 LKDEWILVSPHRCLRPWSGQTEQAPEDQAPDPNNP--LRAGATRSNGQRNPNYESTYVFP 265
L DE L SPHR + S + + P P +P ++ T + + P+ V
Sbjct: 368 LLDEDRLGSPHRKVTQKSTKVVRIPASPRVAPRHPHVIQQNLTTTMTIQKPSV----VIQ 423
Query: 266 NDFPALLERVPGPPEGDNL 322
N P +R P PP +N+
Sbjct: 424 NQRPKPPQRAPPPPPSENI 442
>U97403-8|AAB52470.1| 720|Caenorhabditis elegans Hypothetical
protein T10E9.2 protein.
Length = 720
Score = 27.1 bits (57), Expect = 5.4
Identities = 16/55 (29%), Positives = 20/55 (36%)
Frame = +2
Query: 113 VSPHRCLRPWSGQTEQAPEDQAPDPNNPLRAGATRSNGQRNPNYESTYVFPNDFP 277
+S H CL P + + PDP N NP E Y F +FP
Sbjct: 279 LSSHSCLDPIASSSSFTHVQ--PDPKEVANEAGENVNNAENPEEEEVYTF--EFP 329
>U80441-8|AAB37656.1| 284|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 5 protein.
Length = 284
Score = 27.1 bits (57), Expect = 5.4
Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
Frame = +2
Query: 152 TEQAPEDQAPDPNNPLRAGATRSNGQRNPNYES--TYVFPNDFPALLERVP-GPPEGDNL 322
++ P +P P G T +G+ P PNDFP + P GPP D L
Sbjct: 91 SQGCPAGAPGNPGAPGEPGGTGPDGKNGPTGLPGLNIPIPNDFPKECIKCPAGPPGQDGL 150
>AF016435-1|AAB65878.1| 474|Caenorhabditis elegans Hypothetical
protein F59D6.3 protein.
Length = 474
Score = 27.1 bits (57), Expect = 5.4
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -2
Query: 362 YSATSFSGTRFEIEDCLPQEGPELFPVTRESRSGRHKSTRNSD 234
+ AT+ +GT +++ LPQ +LF T ++S H T D
Sbjct: 267 WPATALNGTSTTMQNLLPQLDQKLF-TTYFTKSNMHNGTAGGD 308
>AC084154-4|AAK29868.1| 767|Caenorhabditis elegans Hypothetical
protein Y22D7AR.7 protein.
Length = 767
Score = 27.1 bits (57), Expect = 5.4
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = -2
Query: 311 PQEGPELFPVTRESRSGRHKSTRNSDSFVHWSGWHQLVMG 192
P+ E TR R +HK D FV + W +V+G
Sbjct: 321 PETTSEEGQTTRIWRKRKHKGAEGPDVFVRFYPWSYVVLG 360
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical protein
K01A6.2 protein.
Length = 1092
Score = 26.6 bits (56), Expect = 7.1
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 161 APEDQAPDPNNPLRAGATRSNGQRNPNYESTYVFPNDFPALLERVPGP 304
AP + A P P+ + N N +YES Y P P++ E+ P P
Sbjct: 940 APPNTA-GPVLPMVSATLGRNFTMNGHYESNYGLPPPPPSVYEKHPPP 986
>Z50872-8|CAA90758.1| 865|Caenorhabditis elegans Hypothetical
protein VW02B12L.1 protein.
Length = 865
Score = 26.6 bits (56), Expect = 7.1
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
Frame = +3
Query: 6 RAKCVERASLNLRTW---ILSLKNI 71
R+KC+ A+ NLR W +L LK+I
Sbjct: 290 RSKCIHAAATNLRKWGIMLLKLKSI 314
>AL031269-3|CAA20334.1| 865|Caenorhabditis elegans Hypothetical
protein VW02B12L.1 protein.
Length = 865
Score = 26.6 bits (56), Expect = 7.1
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
Frame = +3
Query: 6 RAKCVERASLNLRTW---ILSLKNI 71
R+KC+ A+ NLR W +L LK+I
Sbjct: 290 RSKCIHAAATNLRKWGIMLLKLKSI 314
>AB055111-1|BAB62292.1| 865|Caenorhabditis elegans VHA-6 protein.
Length = 865
Score = 26.6 bits (56), Expect = 7.1
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
Frame = +3
Query: 6 RAKCVERASLNLRTW---ILSLKNI 71
R+KC+ A+ NLR W +L LK+I
Sbjct: 290 RSKCIHAAATNLRKWGIMLLKLKSI 314
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,021,919
Number of Sequences: 27780
Number of extensions: 212527
Number of successful extensions: 629
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 628
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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