Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_J01
         (414 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    22   2.4  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    21   5.5  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    21   5.5  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    21   5.5  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    21   5.5  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    21   5.5  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    21   5.5  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    21   5.5  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    21   5.5  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   7.3  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    20   9.6  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    20   9.6  

>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
 Frame = +2

Query: 119 PHRCLRPWSGQTEQAPEDQAPDPNNP----LRAGATRSNGQRNPNYESTY 256
           P R + PW    EQ P  +   P  P    +   A R     NP +  T+
Sbjct: 131 PPRPMGPWISVQEQVPRFRCIGPPTPFPRFIPPNAYRFRPPLNPRFGPTH 180


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
 Frame = +2

Query: 119 PHRCLRPWSGQTEQAPEDQAPDPNNP----LRAGATRSNGQRNPNYESTY 256
           P R + PW    EQ P  +   P  P    +   A R     NP +  T+
Sbjct: 131 PPRPMGPWISIQEQVPRFRYIGPPTPFPRFIPPNAYRFRPPLNPRFGPTH 180


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
 Frame = +2

Query: 119 PHRCLRPWSGQTEQAPEDQAPDPNNP----LRAGATRSNGQRNPNYESTY 256
           P R + PW    EQ P  +   P  P    +   A R     NP +  T+
Sbjct: 131 PPRPMGPWISIQEQVPRFRYIGPPTPFPRFIPPNAYRFRPPLNPRFGPTH 180


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
 Frame = +2

Query: 119 PHRCLRPWSGQTEQAPEDQAPDPNNP----LRAGATRSNGQRNPNYESTY 256
           P R + PW    EQ P  +   P  P    +   A R     NP +  T+
Sbjct: 131 PPRPMGPWISIQEQVPRFRYIGPPTPFPRFIPPNAYRFRPPLNPRFGPTH 180


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
 Frame = +2

Query: 119 PHRCLRPWSGQTEQAPEDQAPDPNNP----LRAGATRSNGQRNPNYESTY 256
           P R + PW    EQ P  +   P  P    +   A R     NP +  T+
Sbjct: 131 PPRPMGPWISIQEQVPRFRYIGPPTPFPRFIPPNAYRFRPPLNPRFGPTH 180


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
 Frame = +2

Query: 119 PHRCLRPWSGQTEQAPEDQAPDPNNP----LRAGATRSNGQRNPNYESTY 256
           P R + PW    EQ P  +   P  P    +   A R     NP +  T+
Sbjct: 131 PPRPMGPWISIQEQVPRFRYIGPPTPFPRFIPPNAYRFRPPLNPRFGPTH 180


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
 Frame = +2

Query: 119 PHRCLRPWSGQTEQAPEDQAPDPNNP----LRAGATRSNGQRNPNYESTY 256
           P R + PW    EQ P  +   P  P    +   A R     NP +  T+
Sbjct: 135 PPRPMGPWISIQEQVPRFRYIGPPTPFPRFIPPNAYRFRPPLNPRFGPTH 184


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
 Frame = +2

Query: 119 PHRCLRPWSGQTEQAPEDQAPDPNNP----LRAGATRSNGQRNPNYESTY 256
           P R + PW    EQ P  +   P  P    +   A R     NP +  T+
Sbjct: 131 PPRPMGPWISIQEQVPRFRYIGPPTPFPRFIPPNAYRFRPPLNPRFGPTH 180


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
 Frame = +2

Query: 119 PHRCLRPWSGQTEQAPEDQAPDPNNP----LRAGATRSNGQRNPNYESTY 256
           P R + PW    EQ P  +   P  P    +   A R     NP +  T+
Sbjct: 356 PPRPMGPWISIQEQVPRFRYIGPPTPFPRFIPPNAYRFRPPLNPRFGPTH 405


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -2

Query: 320  DCLPQEGPELFPVTRESRSGRHKSTRNSDSFVH 222
            DC+ QE  +   V  +S SGR  +  ++  + H
Sbjct: 1649 DCIRQERTQQRNVISDSESGRLDTEMSTWGYHH 1681


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +2

Query: 281 LLERVPGPP 307
           L E++PGPP
Sbjct: 40  LAEKIPGPP 48


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 264 RTTFPRYWKEFRALLR 311
           RTT+  +W EF   L+
Sbjct: 570 RTTYCAFWNEFLPKLK 585


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,233
Number of Sequences: 438
Number of extensions: 2538
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10503195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)