Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_I24
         (180 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    20   2.4  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    20   2.4  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    19   7.2  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    19   7.2  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    18   9.6  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          18   9.6  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      18   9.6  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    18   9.6  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = -3

Query: 103 TVDCIFL-RNPINYLLKMILFKSTFIL 26
           T+D IFL ++P++ LL+   FK T IL
Sbjct: 350 TIDGIFLPKHPLD-LLREADFKDTEIL 375


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = -3

Query: 103 TVDCIFL-RNPINYLLKMILFKSTFIL 26
           T+D IFL ++P++ LL+   FK T IL
Sbjct: 350 TIDGIFLPKHPLD-LLREADFKDTEIL 375


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 12/48 (25%), Positives = 19/48 (39%)
 Frame = -3

Query: 175 STASACDNNSTCCVDIFYRYIDIKTVDCIFLRNPINYLLKMILFKSTF 32
           S    C N STC       +I   T+  I+++    + L +    S F
Sbjct: 108 SADGGCRNFSTCSSHPTAAFISYGTLFFIYVQPSATFSLDLNKVVSVF 155


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
          protein.
          Length = 501

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 85 LRNPINYLL 59
          LR P NYLL
Sbjct: 72 LRRPCNYLL 80


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 12/48 (25%), Positives = 18/48 (37%)
 Frame = -3

Query: 175 STASACDNNSTCCVDIFYRYIDIKTVDCIFLRNPINYLLKMILFKSTF 32
           S    C N STC       +I   T+  I++     + L +    S F
Sbjct: 109 SADGGCRNFSTCSSHPTAAFISYGTLFFIYVHPSATFSLDLNKVVSVF 156


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = -2

Query: 128 FLSIYRH 108
           FLSIY+H
Sbjct: 82  FLSIYKH 88


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = -2

Query: 128 FLSIYRH 108
           FLSIY+H
Sbjct: 82  FLSIYKH 88


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 131 YFLSIYRH*NSRLYLP 84
           YFL+ Y+H +  + LP
Sbjct: 666 YFLNDYKHKDVDVTLP 681


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,021
Number of Sequences: 438
Number of extensions: 577
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 39
effective length of database: 129,261
effective search space used:  2585220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)