Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_I23
(322 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U95000-1|AAF88143.1| 2798|Homo sapiens hyd protein protein. 42 3e-04
AF006010-1|AAD01259.2| 2799|Homo sapiens progestin induced prote... 42 3e-04
AB020703-1|BAA74919.3| 2820|Homo sapiens KIAA0896 protein protein. 42 3e-04
Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding pro... 37 0.012
Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for ... 37 0.012
U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein p... 37 0.012
DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein. 37 0.012
BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein... 37 0.012
BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein... 37 0.012
BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein... 37 0.012
BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein... 37 0.012
BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein. 37 0.012
AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein... 37 0.012
AL109839-10|CAI95639.1| 168|Homo sapiens chromosome 20 open rea... 37 0.012
AL109839-9|CAI95638.1| 171|Homo sapiens chromosome 20 open read... 37 0.012
AL109839-8|CAI95637.1| 149|Homo sapiens chromosome 20 open read... 37 0.012
AL109839-7|CAI95636.1| 151|Homo sapiens chromosome 20 open read... 37 0.012
AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open read... 37 0.012
AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open read... 37 0.012
AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific poly(A)... 37 0.012
AK127880-1|BAC87174.1| 146|Homo sapiens protein ( Homo sapiens ... 34 0.11
U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding pro... 32 0.44
U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding... 32 0.44
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 32 0.44
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 32 0.44
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 32 0.44
AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein... 32 0.44
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 32 0.44
AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein... 32 0.44
AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protei... 32 0.44
AL365277-13|CAI16423.1| 194|Homo sapiens poly(A) binding protei... 32 0.44
AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein... 32 0.44
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 32 0.44
AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein... 32 0.44
AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant ... 32 0.44
AB208962-1|BAD92199.1| 358|Homo sapiens PABPC4 protein variant ... 32 0.44
CR542051-1|CAG46848.1| 287|Homo sapiens LAIR1 protein. 27 9.5
BC027899-1|AAH27899.1| 287|Homo sapiens leukocyte-associated im... 27 9.5
AF251510-1|AAF71275.2| 209|Homo sapiens leukocyte-associated Ig... 27 9.5
AF013249-1|AAB69324.1| 287|Homo sapiens leukocyte-associated Ig... 27 9.5
>U95000-1|AAF88143.1| 2798|Homo sapiens hyd protein protein.
Length = 2798
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/60 (41%), Positives = 33/60 (55%)
Frame = +3
Query: 141 LSVDARPYSPQAAPGTDAAGYS*ERSGGHNDHLTHHQAQLGERLYPRVHSLHPTFAGKIT 320
LS+D RP+ P A+ G + + L H+ LGERLYPRV ++ P FA KIT
Sbjct: 2367 LSIDTRPFRP-ASEGNPS---------DDPEPLPAHRQALGERLYPRVQAMQPAFASKIT 2416
>AF006010-1|AAD01259.2| 2799|Homo sapiens progestin induced protein
protein.
Length = 2799
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/60 (41%), Positives = 33/60 (55%)
Frame = +3
Query: 141 LSVDARPYSPQAAPGTDAAGYS*ERSGGHNDHLTHHQAQLGERLYPRVHSLHPTFAGKIT 320
LS+D RP+ P A+ G + + L H+ LGERLYPRV ++ P FA KIT
Sbjct: 2368 LSIDTRPFRP-ASEGNPS---------DDPEPLPAHRQALGERLYPRVQAMQPAFASKIT 2417
>AB020703-1|BAA74919.3| 2820|Homo sapiens KIAA0896 protein protein.
Length = 2820
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/60 (41%), Positives = 33/60 (55%)
Frame = +3
Query: 141 LSVDARPYSPQAAPGTDAAGYS*ERSGGHNDHLTHHQAQLGERLYPRVHSLHPTFAGKIT 320
LS+D RP+ P A+ G + + L H+ LGERLYPRV ++ P FA KIT
Sbjct: 2390 LSIDTRPFRP-ASEGNPS---------DDPEPLPAHRQALGERLYPRVQAMQPAFASKIT 2439
>Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding
protein II protein.
Length = 522
Score = 37.1 bits (82), Expect = 0.012
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +3
Query: 258 LGERLYPRVHSLHPTFAGKIT 320
LGERL+P + ++HPT AGKIT
Sbjct: 448 LGERLFPLIQAMHPTLAGKIT 468
>Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for
polyA binding protein. ).
Length = 633
Score = 37.1 bits (82), Expect = 0.012
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +3
Query: 258 LGERLYPRVHSLHPTFAGKIT 320
LGERL+P + ++HPT AGKIT
Sbjct: 559 LGERLFPLIQAMHPTLAGKIT 579
>U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein
protein.
Length = 636
Score = 37.1 bits (82), Expect = 0.012
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +3
Query: 258 LGERLYPRVHSLHPTFAGKIT 320
LGERL+P + ++HPT AGKIT
Sbjct: 562 LGERLFPLIQAMHPTLAGKIT 582
>DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein.
Length = 630
Score = 37.1 bits (82), Expect = 0.012
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +3
Query: 258 LGERLYPRVHSLHPTFAGKIT 320
LGERL+P + ++HPT AGKIT
Sbjct: 557 LGERLFPLIQAMHPTLAGKIT 577
>BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 37.1 bits (82), Expect = 0.012
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +3
Query: 258 LGERLYPRVHSLHPTFAGKIT 320
LGERL+P + ++HPT AGKIT
Sbjct: 557 LGERLFPLIQAMHPTLAGKIT 577
>BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 37.1 bits (82), Expect = 0.012
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +3
Query: 258 LGERLYPRVHSLHPTFAGKIT 320
LGERL+P + ++HPT AGKIT
Sbjct: 562 LGERLFPLIQAMHPTLAGKIT 582
>BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 37.1 bits (82), Expect = 0.012
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +3
Query: 258 LGERLYPRVHSLHPTFAGKIT 320
LGERL+P + ++HPT AGKIT
Sbjct: 557 LGERLFPLIQAMHPTLAGKIT 577
>BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 37.1 bits (82), Expect = 0.012
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +3
Query: 258 LGERLYPRVHSLHPTFAGKIT 320
LGERL+P + ++HPT AGKIT
Sbjct: 562 LGERLFPLIQAMHPTLAGKIT 582
>BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein.
Length = 636
Score = 37.1 bits (82), Expect = 0.012
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +3
Query: 258 LGERLYPRVHSLHPTFAGKIT 320
LGERL+P + ++HPT AGKIT
Sbjct: 562 LGERLFPLIQAMHPTLAGKIT 582
>AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 37.1 bits (82), Expect = 0.012
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +3
Query: 258 LGERLYPRVHSLHPTFAGKIT 320
LGERL+P + ++HPT AGKIT
Sbjct: 557 LGERLFPLIQAMHPTLAGKIT 577
>AL109839-10|CAI95639.1| 168|Homo sapiens chromosome 20 open
reading frame 119 protein.
Length = 168
Score = 37.1 bits (82), Expect = 0.012
Identities = 16/27 (59%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +3
Query: 243 HHQAQL-GERLYPRVHSLHPTFAGKIT 320
H Q Q+ GERLYP +H +H AGKIT
Sbjct: 96 HEQKQMIGERLYPLIHDVHTQLAGKIT 122
>AL109839-9|CAI95638.1| 171|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 171
Score = 37.1 bits (82), Expect = 0.012
Identities = 16/27 (59%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +3
Query: 243 HHQAQL-GERLYPRVHSLHPTFAGKIT 320
H Q Q+ GERLYP +H +H AGKIT
Sbjct: 96 HEQKQMIGERLYPLIHDVHTQLAGKIT 122
>AL109839-8|CAI95637.1| 149|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 149
Score = 37.1 bits (82), Expect = 0.012
Identities = 16/27 (59%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +3
Query: 243 HHQAQL-GERLYPRVHSLHPTFAGKIT 320
H Q Q+ GERLYP +H +H AGKIT
Sbjct: 96 HEQKQMIGERLYPLIHDVHTQLAGKIT 122
>AL109839-7|CAI95636.1| 151|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 151
Score = 37.1 bits (82), Expect = 0.012
Identities = 16/27 (59%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +3
Query: 243 HHQAQL-GERLYPRVHSLHPTFAGKIT 320
H Q Q+ GERLYP +H +H AGKIT
Sbjct: 77 HEQKQMIGERLYPLIHDVHTQLAGKIT 103
>AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 37.1 bits (82), Expect = 0.012
Identities = 16/27 (59%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +3
Query: 243 HHQAQL-GERLYPRVHSLHPTFAGKIT 320
H Q Q+ GERLYP +H +H AGKIT
Sbjct: 542 HEQKQMIGERLYPLIHDVHTQLAGKIT 568
>AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 37.1 bits (82), Expect = 0.012
Identities = 16/27 (59%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +3
Query: 243 HHQAQL-GERLYPRVHSLHPTFAGKIT 320
H Q Q+ GERLYP +H +H AGKIT
Sbjct: 542 HEQKQMIGERLYPLIHDVHTQLAGKIT 568
>AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific
poly(A)-binding protein protein.
Length = 631
Score = 37.1 bits (82), Expect = 0.012
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +3
Query: 258 LGERLYPRVHSLHPTFAGKIT 320
LGERL+P + ++HPT AGKIT
Sbjct: 557 LGERLFPLIQAMHPTLAGKIT 577
>AK127880-1|BAC87174.1| 146|Homo sapiens protein ( Homo sapiens
cDNA FLJ45986 fis, clone PUAEN2000594, highly similar
to Polyadenylate-binding protein 1. ).
Length = 146
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +3
Query: 258 LGERLYPRVHSLHPTFAGKIT 320
LGE L+P + ++HPT AGKIT
Sbjct: 72 LGEWLFPLIQAMHPTLAGKIT 92
>U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding
protein protein.
Length = 644
Score = 31.9 bits (69), Expect = 0.44
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 258 LGERLYPRVHSLHPTFAGKIT 320
LGERL+P + ++H AGKIT
Sbjct: 571 LGERLFPLIQTMHSNLAGKIT 591
>U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding
protein protein.
Length = 644
Score = 31.9 bits (69), Expect = 0.44
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 258 LGERLYPRVHSLHPTFAGKIT 320
LGERL+P + ++H AGKIT
Sbjct: 571 LGERLFPLIQTMHSNLAGKIT 591
>BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 31.9 bits (69), Expect = 0.44
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 258 LGERLYPRVHSLHPTFAGKIT 320
LGERL+P + ++H AGKIT
Sbjct: 587 LGERLFPLIQTMHSNLAGKIT 607
>BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 31.9 bits (69), Expect = 0.44
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 258 LGERLYPRVHSLHPTFAGKIT 320
LGERL+P + ++H AGKIT
Sbjct: 587 LGERLFPLIQTMHSNLAGKIT 607
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 31.9 bits (69), Expect = 0.44
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 258 LGERLYPRVHSLHPTFAGKIT 320
LGERL+P + ++H AGKIT
Sbjct: 558 LGERLFPLIQTMHSNLAGKIT 578
>AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibletaining 6 protein.
Length = 644
Score = 31.9 bits (69), Expect = 0.44
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 258 LGERLYPRVHSLHPTFAGKIT 320
LGERL+P + ++H AGKIT
Sbjct: 571 LGERLFPLIQTMHSNLAGKIT 591
>AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleseudogene protein.
Length = 660
Score = 31.9 bits (69), Expect = 0.44
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 258 LGERLYPRVHSLHPTFAGKIT 320
LGERL+P + ++H AGKIT
Sbjct: 587 LGERLFPLIQTMHSNLAGKIT 607
>AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeudogene protein.
Length = 615
Score = 31.9 bits (69), Expect = 0.44
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 258 LGERLYPRVHSLHPTFAGKIT 320
LGERL+P + ++H AGKIT
Sbjct: 542 LGERLFPLIQTMHSNLAGKIT 562
>AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblela) protein.
Length = 410
Score = 31.9 bits (69), Expect = 0.44
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 258 LGERLYPRVHSLHPTFAGKIT 320
LGERL+P + ++H AGKIT
Sbjct: 337 LGERLFPLIQTMHSNLAGKIT 357
>AL365277-13|CAI16423.1| 194|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblela) protein.
Length = 194
Score = 31.9 bits (69), Expect = 0.44
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 258 LGERLYPRVHSLHPTFAGKIT 320
LGERL+P + ++H AGKIT
Sbjct: 125 LGERLFPLIQTMHSNLAGKIT 145
>AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblepeptide, antigen CD29 includes
protein.
Length = 644
Score = 31.9 bits (69), Expect = 0.44
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 258 LGERLYPRVHSLHPTFAGKIT 320
LGERL+P + ++H AGKIT
Sbjct: 571 LGERLFPLIQTMHSNLAGKIT 591
>AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducible) pseudogene protein.
Length = 660
Score = 31.9 bits (69), Expect = 0.44
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 258 LGERLYPRVHSLHPTFAGKIT 320
LGERL+P + ++H AGKIT
Sbjct: 587 LGERLFPLIQTMHSNLAGKIT 607
>AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblely, member 5 protein.
Length = 615
Score = 31.9 bits (69), Expect = 0.44
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 258 LGERLYPRVHSLHPTFAGKIT 320
LGERL+P + ++H AGKIT
Sbjct: 542 LGERLFPLIQTMHSNLAGKIT 562
>AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant
protein.
Length = 371
Score = 31.9 bits (69), Expect = 0.44
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 258 LGERLYPRVHSLHPTFAGKIT 320
LGERL+P + ++H AGKIT
Sbjct: 298 LGERLFPLIQTMHSNLAGKIT 318
>AB208962-1|BAD92199.1| 358|Homo sapiens PABPC4 protein variant
protein.
Length = 358
Score = 31.9 bits (69), Expect = 0.44
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 258 LGERLYPRVHSLHPTFAGKIT 320
LGERL+P + ++H AGKIT
Sbjct: 285 LGERLFPLIQTMHSNLAGKIT 305
>CR542051-1|CAG46848.1| 287|Homo sapiens LAIR1 protein.
Length = 287
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 159 PYSPQAAPGTDAAGYS*ERSGGHNDHLTHHQAQLGERLY 275
P SP PG+ A HN+H Q E LY
Sbjct: 127 PDSPDTEPGSSAGPTQRPSDNSHNEHAPASQGLKAEHLY 165
>BC027899-1|AAH27899.1| 287|Homo sapiens leukocyte-associated
immunoglobulin-like receptor 1 protein.
Length = 287
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 159 PYSPQAAPGTDAAGYS*ERSGGHNDHLTHHQAQLGERLY 275
P SP PG+ A HN+H Q E LY
Sbjct: 127 PDSPDTEPGSSAGPTQRPSDNSHNEHAPASQGLKAEHLY 165
>AF251510-1|AAF71275.2| 209|Homo sapiens leukocyte-associated
Ig-like receptor 1D isoform protein.
Length = 209
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 159 PYSPQAAPGTDAAGYS*ERSGGHNDHLTHHQAQLGERLY 275
P SP PG+ A HN+H Q E LY
Sbjct: 127 PDSPDTEPGSSAGPTQRPSDNSHNEHAPASQGLKAEHLY 165
>AF013249-1|AAB69324.1| 287|Homo sapiens leukocyte-associated
Ig-like receptor-1 protein.
Length = 287
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 159 PYSPQAAPGTDAAGYS*ERSGGHNDHLTHHQAQLGERLY 275
P SP PG+ A HN+H Q E LY
Sbjct: 127 PDSPDTEPGSSAGPTQRPSDNSHNEHAPASQGLKAEHLY 165
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,379,727
Number of Sequences: 237096
Number of extensions: 592346
Number of successful extensions: 1436
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1436
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1569468906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -