Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_I22
         (491 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z32681-6|CAA83605.1|  257|Caenorhabditis elegans Hypothetical pr...   198   1e-51
AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical...    30   0.79 
U50191-6|AAK31554.2|  235|Caenorhabditis elegans Hypothetical pr...    29   2.4  
AF016415-8|AAW88415.1|  297|Caenorhabditis elegans Serpentine re...    29   2.4  
AF016673-4|AAB66125.2|  743|Caenorhabditis elegans Hypothetical ...    28   4.2  
Z29115-6|CAA82365.2| 1374|Caenorhabditis elegans Hypothetical pr...    27   5.6  
Z29115-5|CAA82366.2| 1368|Caenorhabditis elegans Hypothetical pr...    27   5.6  
Z19153-7|CAA79550.2| 1374|Caenorhabditis elegans Hypothetical pr...    27   5.6  
Z19153-6|CAA79551.2| 1368|Caenorhabditis elegans Hypothetical pr...    27   5.6  
U28738-2|AAA68309.4|  982|Caenorhabditis elegans Hypothetical pr...    27   5.6  
AC024756-2|AAK29884.1|  413|Caenorhabditis elegans Hypothetical ...    27   5.6  
Z83223-4|CAB05716.2|  534|Caenorhabditis elegans Hypothetical pr...    27   9.8  

>Z32681-6|CAA83605.1|  257|Caenorhabditis elegans Hypothetical
           protein F56F3.5 protein.
          Length = 257

 Score =  198 bits (484), Expect = 1e-51
 Identities = 95/137 (69%), Positives = 110/137 (80%)
 Frame = +1

Query: 79  VDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAE 258
           VDPF+RK+WYD+KAP+MF  RQVG TL+NRTQGTKIASEGLKGRVFEVSL DL   +++E
Sbjct: 20  VDPFSRKEWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVFEVSLGDL---NNSE 76

Query: 259 RSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVY 438
             FRKF+LIAEDVQG+NVL NFH M +T DKL  +VKKW TLIEAN  VKTTDGY LRV+
Sbjct: 77  ADFRKFKLIAEDVQGKNVLTNFHAMSMTHDKLCSIVKKWHTLIEANTAVKTTDGYTLRVF 136

Query: 439 CIGFTNKDTLRQRKTCY 489
            I FT K   + +KT Y
Sbjct: 137 VIAFTKKSVNQVKKTSY 153


>AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical
            protein Y66D12A.14 protein.
          Length = 2870

 Score = 30.3 bits (65), Expect = 0.79
 Identities = 15/35 (42%), Positives = 16/35 (45%)
 Frame = -1

Query: 221  TSKTRPFRPSDAIFVPWVRLTRVVPTCLLVNMDGA 117
            TSK +P R  D I V   R T     CL V   GA
Sbjct: 2175 TSKAQPIRSDDVISVAGTRSTETTMKCLAVQFTGA 2209


>U50191-6|AAK31554.2|  235|Caenorhabditis elegans Hypothetical
           protein T14B4.8 protein.
          Length = 235

 Score = 28.7 bits (61), Expect = 2.4
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = -1

Query: 188 AIFVPWVRLTRVVPTCLLVNMDGALTSYQSLRVKG 84
           + F+P++R  R VPT  +++ +G +  Y +L   G
Sbjct: 119 SFFIPFLRPRRTVPTFSIIDWNGEVLGYYALASDG 153


>AF016415-8|AAW88415.1|  297|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 32 protein.
          Length = 297

 Score = 28.7 bits (61), Expect = 2.4
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = -1

Query: 413 VVLTSMLASISVCHFFTIHLSLSVVRSMPWKLQRTLRPWTSSAISL 276
           V +  ++ ++ V H F+ H  L V   +PW    T R   + AISL
Sbjct: 60  VYIIFVILTMEVPHLFSNHRGLIVTLGLPWSNFATCRSAIALAISL 105


>AF016673-4|AAB66125.2|  743|Caenorhabditis elegans Hypothetical
           protein T06D4.3 protein.
          Length = 743

 Score = 27.9 bits (59), Expect = 4.2
 Identities = 15/55 (27%), Positives = 27/55 (49%)
 Frame = +1

Query: 307 NVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVYCIGFTNKDTLR 471
           NVL N+  +   T+ +   +KK  T +   I ++  D    RVY   + +K+ L+
Sbjct: 379 NVLANYLVLKFLTESVEEFIKKNSTALCEEIVMEKLDYAAFRVYYQNYFDKENLQ 433


>Z29115-6|CAA82365.2| 1374|Caenorhabditis elegans Hypothetical
           protein C38C10.5b protein.
          Length = 1374

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 119 RRPCSPRDKWAPPLSIAPREQKL 187
           R P   ++ + PP  I PREQKL
Sbjct: 86  RMPSKIKEAFIPPAKITPREQKL 108


>Z29115-5|CAA82366.2| 1368|Caenorhabditis elegans Hypothetical
           protein C38C10.5a protein.
          Length = 1368

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 119 RRPCSPRDKWAPPLSIAPREQKL 187
           R P   ++ + PP  I PREQKL
Sbjct: 86  RMPSKIKEAFIPPAKITPREQKL 108


>Z19153-7|CAA79550.2| 1374|Caenorhabditis elegans Hypothetical
           protein C38C10.5b protein.
          Length = 1374

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 119 RRPCSPRDKWAPPLSIAPREQKL 187
           R P   ++ + PP  I PREQKL
Sbjct: 86  RMPSKIKEAFIPPAKITPREQKL 108


>Z19153-6|CAA79551.2| 1368|Caenorhabditis elegans Hypothetical
           protein C38C10.5a protein.
          Length = 1368

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 119 RRPCSPRDKWAPPLSIAPREQKL 187
           R P   ++ + PP  I PREQKL
Sbjct: 86  RMPSKIKEAFIPPAKITPREQKL 108


>U28738-2|AAA68309.4|  982|Caenorhabditis elegans Hypothetical
           protein T28D9.7 protein.
          Length = 982

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = -3

Query: 426 DISVSGLNVNVGFNQCLPF-LYHPSELISGEVHAVEIAENITSLDILSD 283
           D S++G+NV  G++  +PF + H S+L    VH +E  EN   ++  +D
Sbjct: 296 DSSMNGVNVPSGYSMDIPFKMQHRSKLTG--VHCIE--ENDEQIEASTD 340


>AC024756-2|AAK29884.1|  413|Caenorhabditis elegans Hypothetical
           protein Y34D9A.1 protein.
          Length = 413

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -3

Query: 339 EVHAVEIAENITSLDILSDKSELAE 265
           E+H +E AE++ SL +L  KSE+ +
Sbjct: 63  EMHIIEPAEHMKSLKVLMQKSEIEQ 87


>Z83223-4|CAB05716.2|  534|Caenorhabditis elegans Hypothetical
           protein E01G4.4 protein.
          Length = 534

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 259 FPHHYQPGDQQGRPQKHAPLDPQMQ 185
           + ++ Q   QQGRPQ++A   PQ Q
Sbjct: 34  YGYNNQQQQQQGRPQQYAGYPPQRQ 58


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,259,432
Number of Sequences: 27780
Number of extensions: 241373
Number of successful extensions: 601
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 600
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)