Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_I16
(308 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y13939-1|CAA74278.1| 134|Drosophila melanogaster ribosomal prot... 184 2e-47
U92431-1|AAB51389.1| 134|Drosophila melanogaster ribosomal prot... 184 2e-47
BT011442-1|AAR99100.1| 147|Drosophila melanogaster RE59709p pro... 184 2e-47
AY070656-1|AAL48127.1| 134|Drosophila melanogaster RH03940p pro... 184 2e-47
AE014297-4527|AAN14211.1| 134|Drosophila melanogaster CG7939-PB... 184 2e-47
AE014297-4526|AAF57001.1| 134|Drosophila melanogaster CG7939-PA... 184 2e-47
AE014297-4525|AAN14210.1| 147|Drosophila melanogaster CG7939-PC... 184 2e-47
X00848-1|CAA25404.1| 133|Drosophila melanogaster ribosomal prot... 143 5e-35
BT030157-1|ABN49296.1| 126|Drosophila melanogaster IP17707p pro... 65 1e-11
BT023802-1|AAZ66309.1| 872|Drosophila melanogaster RE68448p pro... 29 0.88
AY128419-1|AAM75012.1| 741|Drosophila melanogaster GH14073p pro... 29 0.88
AY119611-1|AAM50265.1| 773|Drosophila melanogaster LD35363p pro... 29 0.88
AF239609-1|AAF63501.1| 741|Drosophila melanogaster SP1173 protein. 29 0.88
AE014297-1106|AAF54500.1| 872|Drosophila melanogaster CG6241-PA... 29 0.88
AE014296-1144|AAN12079.1| 741|Drosophila melanogaster CG10121-P... 29 0.88
AE014296-1143|AAN12078.1| 741|Drosophila melanogaster CG10121-P... 29 0.88
AE014296-1142|AAF50650.1| 741|Drosophila melanogaster CG10121-P... 29 0.88
AE014296-1141|AAN12077.1| 741|Drosophila melanogaster CG10121-P... 29 0.88
X68309-2|CAA48386.1| 802|Drosophila melanogaster ERCC3 protein. 26 8.2
S50517-1|AAA12421.1| 802|Drosophila melanogaster ERCC3Dm protein. 26 8.2
L02965-1|AAA74931.1| 801|Drosophila melanogaster helicase protein. 26 8.2
BT025199-1|ABF17890.1| 798|Drosophila melanogaster FI01118p pro... 26 8.2
AY051975-1|AAK93399.1| 798|Drosophila melanogaster LD44022p pro... 26 8.2
AE014296-1828|AAF50150.1| 798|Drosophila melanogaster CG8019-PA... 26 8.2
>Y13939-1|CAA74278.1| 134|Drosophila melanogaster ribosomal protein
49 protein.
Length = 134
Score = 184 bits (448), Expect = 2e-47
Identities = 82/99 (82%), Positives = 91/99 (91%)
Frame = +3
Query: 9 DRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPSGFRKVLVHNVREL 188
DRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYGSNK+TRHMLP+GF+K LVHNVREL
Sbjct: 25 DRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVREL 84
Query: 189 EILMMQNRKYCAEIAHGVSSKKRKAIVERAQQLSIRVTN 305
E+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN
Sbjct: 85 EVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTN 123
>U92431-1|AAB51389.1| 134|Drosophila melanogaster ribosomal protein
49 protein.
Length = 134
Score = 184 bits (448), Expect = 2e-47
Identities = 82/99 (82%), Positives = 91/99 (91%)
Frame = +3
Query: 9 DRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPSGFRKVLVHNVREL 188
DRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYGSNK+TRHMLP+GF+K LVHNVREL
Sbjct: 25 DRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVREL 84
Query: 189 EILMMQNRKYCAEIAHGVSSKKRKAIVERAQQLSIRVTN 305
E+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN
Sbjct: 85 EVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTN 123
>BT011442-1|AAR99100.1| 147|Drosophila melanogaster RE59709p
protein.
Length = 147
Score = 184 bits (448), Expect = 2e-47
Identities = 82/99 (82%), Positives = 91/99 (91%)
Frame = +3
Query: 9 DRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPSGFRKVLVHNVREL 188
DRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYGSNK+TRHMLP+GF+K LVHNVREL
Sbjct: 38 DRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVREL 97
Query: 189 EILMMQNRKYCAEIAHGVSSKKRKAIVERAQQLSIRVTN 305
E+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN
Sbjct: 98 EVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTN 136
>AY070656-1|AAL48127.1| 134|Drosophila melanogaster RH03940p
protein.
Length = 134
Score = 184 bits (448), Expect = 2e-47
Identities = 82/99 (82%), Positives = 91/99 (91%)
Frame = +3
Query: 9 DRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPSGFRKVLVHNVREL 188
DRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYGSNK+TRHMLP+GF+K LVHNVREL
Sbjct: 25 DRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVREL 84
Query: 189 EILMMQNRKYCAEIAHGVSSKKRKAIVERAQQLSIRVTN 305
E+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN
Sbjct: 85 EVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTN 123
>AE014297-4527|AAN14211.1| 134|Drosophila melanogaster CG7939-PB,
isoform B protein.
Length = 134
Score = 184 bits (448), Expect = 2e-47
Identities = 82/99 (82%), Positives = 91/99 (91%)
Frame = +3
Query: 9 DRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPSGFRKVLVHNVREL 188
DRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYGSNK+TRHMLP+GF+K LVHNVREL
Sbjct: 25 DRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVREL 84
Query: 189 EILMMQNRKYCAEIAHGVSSKKRKAIVERAQQLSIRVTN 305
E+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN
Sbjct: 85 EVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTN 123
>AE014297-4526|AAF57001.1| 134|Drosophila melanogaster CG7939-PA,
isoform A protein.
Length = 134
Score = 184 bits (448), Expect = 2e-47
Identities = 82/99 (82%), Positives = 91/99 (91%)
Frame = +3
Query: 9 DRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPSGFRKVLVHNVREL 188
DRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYGSNK+TRHMLP+GF+K LVHNVREL
Sbjct: 25 DRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVREL 84
Query: 189 EILMMQNRKYCAEIAHGVSSKKRKAIVERAQQLSIRVTN 305
E+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN
Sbjct: 85 EVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTN 123
>AE014297-4525|AAN14210.1| 147|Drosophila melanogaster CG7939-PC,
isoform C protein.
Length = 147
Score = 184 bits (448), Expect = 2e-47
Identities = 82/99 (82%), Positives = 91/99 (91%)
Frame = +3
Query: 9 DRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPSGFRKVLVHNVREL 188
DRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYGSNK+TRHMLP+GF+K LVHNVREL
Sbjct: 38 DRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVREL 97
Query: 189 EILMMQNRKYCAEIAHGVSSKKRKAIVERAQQLSIRVTN 305
E+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN
Sbjct: 98 EVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTN 136
>X00848-1|CAA25404.1| 133|Drosophila melanogaster ribosomal protein
49 protein.
Length = 133
Score = 143 bits (346), Expect = 5e-35
Identities = 66/96 (68%), Positives = 78/96 (81%)
Frame = +3
Query: 9 DRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPSGFRKVLVHNVREL 188
DRY KL WRKP+GIDNRV RRFKGQYLMPNIGYGSNK+TRHMLP+GF+K LVHNVREL
Sbjct: 25 DRYAKLSHKWRKPKGIDNRVGRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVREL 84
Query: 189 EILMMQNRKYCAEIAHGVSSKKRKAIVERAQQLSIR 296
E+L+MQN + E+ S + K I+ERA+QLS+R
Sbjct: 85 EVLLMQNPRLLREMP-TASPPRSKEIIERAKQLSLR 119
>BT030157-1|ABN49296.1| 126|Drosophila melanogaster IP17707p
protein.
Length = 126
Score = 65.3 bits (152), Expect = 1e-11
Identities = 37/84 (44%), Positives = 48/84 (57%)
Frame = +2
Query: 35 LA*TERYRQQST*ALQGSILDAQHWLWFK*EDPSHATQRFS*SLGPQRSRTGDPDDAEQE 214
+A + YRQQS LQG++ DAQH L + P HA R G QR+R G P AE
Sbjct: 1 MAQAQGYRQQSASPLQGTVSDAQHRLRIEQAHPPHAAHRIQEVPGAQRARAGGPAHAEPR 60
Query: 215 ILRGNRTWRLLEKTEGYSRACPAA 286
+LR +R RLL++ +G RA AA
Sbjct: 61 LLRRDRPRRLLQEAQGDCRARQAA 84
>BT023802-1|AAZ66309.1| 872|Drosophila melanogaster RE68448p
protein.
Length = 872
Score = 29.5 bits (63), Expect = 0.88
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 167 GPQRSRTGDPDDAEQEILRGNRTWRLLEKTEGYSRACPAAQHQGDQ 304
G + + TGDP+D + NRT R L+ GY A++ +G+Q
Sbjct: 160 GKKSTLTGDPNDERAKFRLWNRTKRNLD-ASGYRSHGGASESEGEQ 204
>AY128419-1|AAM75012.1| 741|Drosophila melanogaster GH14073p
protein.
Length = 741
Score = 29.5 bits (63), Expect = 0.88
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -3
Query: 249 SRRRHVRFPR-SISCSASSGSPVRERCGPRLYENRWVACDGSSYLNHNQCWASSIDP 82
+RR +R P S C + G +ERCG +RW +G +N +C S +P
Sbjct: 112 TRRGEIREPLVSFGCDETGGFLFQERCGSNATCSRWDQKEGK--INLTRCTYSCQNP 166
>AY119611-1|AAM50265.1| 773|Drosophila melanogaster LD35363p
protein.
Length = 773
Score = 29.5 bits (63), Expect = 0.88
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 167 GPQRSRTGDPDDAEQEILRGNRTWRLLEKTEGYSRACPAAQHQGDQ 304
G + + TGDP+D + NRT R L+ GY A++ +G+Q
Sbjct: 61 GKKSTLTGDPNDERAKFRLWNRTKRNLD-ASGYRSHGGASESEGEQ 105
>AF239609-1|AAF63501.1| 741|Drosophila melanogaster SP1173 protein.
Length = 741
Score = 29.5 bits (63), Expect = 0.88
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -3
Query: 249 SRRRHVRFPR-SISCSASSGSPVRERCGPRLYENRWVACDGSSYLNHNQCWASSIDP 82
+RR +R P S C + G +ERCG +RW +G +N +C S +P
Sbjct: 112 TRRGEIREPLVSFGCDETGGFLFQERCGSNATCSRWDQKEGK--INLTRCTYSCQNP 166
>AE014297-1106|AAF54500.1| 872|Drosophila melanogaster CG6241-PA
protein.
Length = 872
Score = 29.5 bits (63), Expect = 0.88
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 167 GPQRSRTGDPDDAEQEILRGNRTWRLLEKTEGYSRACPAAQHQGDQ 304
G + + TGDP+D + NRT R L+ GY A++ +G+Q
Sbjct: 160 GKKSTLTGDPNDERAKFRLWNRTKRNLD-ASGYRSHGGASESEGEQ 204
>AE014296-1144|AAN12079.1| 741|Drosophila melanogaster CG10121-PD,
isoform D protein.
Length = 741
Score = 29.5 bits (63), Expect = 0.88
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -3
Query: 249 SRRRHVRFPR-SISCSASSGSPVRERCGPRLYENRWVACDGSSYLNHNQCWASSIDP 82
+RR +R P S C + G +ERCG +RW +G +N +C S +P
Sbjct: 112 TRRGEIREPLVSFGCDETGGFLFQERCGSNATCSRWDQKEGK--INLTRCTYSCQNP 166
>AE014296-1143|AAN12078.1| 741|Drosophila melanogaster CG10121-PC,
isoform C protein.
Length = 741
Score = 29.5 bits (63), Expect = 0.88
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -3
Query: 249 SRRRHVRFPR-SISCSASSGSPVRERCGPRLYENRWVACDGSSYLNHNQCWASSIDP 82
+RR +R P S C + G +ERCG +RW +G +N +C S +P
Sbjct: 112 TRRGEIREPLVSFGCDETGGFLFQERCGSNATCSRWDQKEGK--INLTRCTYSCQNP 166
>AE014296-1142|AAF50650.1| 741|Drosophila melanogaster CG10121-PB,
isoform B protein.
Length = 741
Score = 29.5 bits (63), Expect = 0.88
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -3
Query: 249 SRRRHVRFPR-SISCSASSGSPVRERCGPRLYENRWVACDGSSYLNHNQCWASSIDP 82
+RR +R P S C + G +ERCG +RW +G +N +C S +P
Sbjct: 112 TRRGEIREPLVSFGCDETGGFLFQERCGSNATCSRWDQKEGK--INLTRCTYSCQNP 166
>AE014296-1141|AAN12077.1| 741|Drosophila melanogaster CG10121-PA,
isoform A protein.
Length = 741
Score = 29.5 bits (63), Expect = 0.88
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -3
Query: 249 SRRRHVRFPR-SISCSASSGSPVRERCGPRLYENRWVACDGSSYLNHNQCWASSIDP 82
+RR +R P S C + G +ERCG +RW +G +N +C S +P
Sbjct: 112 TRRGEIREPLVSFGCDETGGFLFQERCGSNATCSRWDQKEGK--INLTRCTYSCQNP 166
>X68309-2|CAA48386.1| 802|Drosophila melanogaster ERCC3 protein.
Length = 802
Score = 26.2 bits (55), Expect = 8.2
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -3
Query: 171 GPRLYENRWVACDGSSYLNHNQC 103
GP+LYE W+ Y+ QC
Sbjct: 505 GPKLYEANWLELQKKGYIARVQC 527
>S50517-1|AAA12421.1| 802|Drosophila melanogaster ERCC3Dm protein.
Length = 802
Score = 26.2 bits (55), Expect = 8.2
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -3
Query: 171 GPRLYENRWVACDGSSYLNHNQC 103
GP+LYE W+ Y+ QC
Sbjct: 505 GPKLYEANWLELQKKGYIARVQC 527
>L02965-1|AAA74931.1| 801|Drosophila melanogaster helicase protein.
Length = 801
Score = 26.2 bits (55), Expect = 8.2
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -3
Query: 171 GPRLYENRWVACDGSSYLNHNQC 103
GP+LYE W+ Y+ QC
Sbjct: 505 GPKLYEANWLELQKKGYIARCQC 527
>BT025199-1|ABF17890.1| 798|Drosophila melanogaster FI01118p
protein.
Length = 798
Score = 26.2 bits (55), Expect = 8.2
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -3
Query: 171 GPRLYENRWVACDGSSYLNHNQC 103
GP+LYE W+ Y+ QC
Sbjct: 501 GPKLYEANWLELQKKGYIARVQC 523
>AY051975-1|AAK93399.1| 798|Drosophila melanogaster LD44022p
protein.
Length = 798
Score = 26.2 bits (55), Expect = 8.2
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -3
Query: 171 GPRLYENRWVACDGSSYLNHNQC 103
GP+LYE W+ Y+ QC
Sbjct: 501 GPKLYEANWLELQKKGYIARVQC 523
>AE014296-1828|AAF50150.1| 798|Drosophila melanogaster CG8019-PA
protein.
Length = 798
Score = 26.2 bits (55), Expect = 8.2
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -3
Query: 171 GPRLYENRWVACDGSSYLNHNQC 103
GP+LYE W+ Y+ QC
Sbjct: 501 GPKLYEANWLELQKKGYIARVQC 523
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,000,036
Number of Sequences: 53049
Number of extensions: 281639
Number of successful extensions: 694
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 693
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 589756776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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