Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_I15
(247 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC11C11.04c |alp1||tubulin specific chaperone cofactor D |Schi... 27 0.35
SPAC19A8.02 |||transcriptional coactivator |Schizosaccharomyces ... 25 1.4
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 25 1.8
SPBC1861.04c |||RNA-binding protein Prp24|Schizosaccharomyces po... 24 3.2
SPAC1142.04 |||Noc2p-Noc3p complex subunit Noc2 family |Schizosa... 23 4.3
SPBC36.09 |sap61||U2 snRNP-associated protein sap61|Schizosaccha... 23 4.3
SPCC736.07c |||cell polarity protein |Schizosaccharomyces pombe|... 23 5.6
SPCC1795.02c ||SPCC895.01|CaCA proton/calcium exchanger|Schizosa... 23 5.6
SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|c... 23 5.6
SPBC2A9.05c |||DUF846 family protein|Schizosaccharomyces pombe|c... 23 5.6
SPCC74.09 |mug24||RNA-binding protein, rrm type|Schizosaccharomy... 23 5.6
SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1 |Schizosaccharo... 23 5.6
SPAPB1E7.11c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 23 7.4
SPAC3A12.17c |cys12|cys1b|cysteine synthase Cys12|Schizosaccharo... 23 7.4
SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|c... 23 7.4
SPBC18E5.01 ||SPBC29A3.19|cycloisomerase 2 family|Schizosaccharo... 23 7.4
SPBC19C2.11c |||mitochondrial outer membrane protein |Schizosacc... 23 7.4
SPAC10F6.14c |||ABC1 kinase family protein|Schizosaccharomyces p... 22 9.8
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 22 9.8
SPBC839.08c |its8||pig-N |Schizosaccharomyces pombe|chr 2|||Manual 22 9.8
>SPBC11C11.04c |alp1||tubulin specific chaperone cofactor D
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1107
Score = 27.1 bits (57), Expect = 0.35
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = -1
Query: 181 LWHGFLFSSFFRVIDGGAVFHLNHGLFSMSLFLVLFIEVSGSYEWIQGVLQTGKQVR 11
+WHG + FF + G + +S L ++ IEV SYE G TG+ +R
Sbjct: 381 VWHGAIL--FFAKLAGAGLIK-----YSKCLHILPLIEVGLSYEVRYGTRVTGQSIR 430
>SPAC19A8.02 |||transcriptional coactivator |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1213
Score = 25.0 bits (52), Expect = 1.4
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 116 ESRTFFYVSVPCALYRSFW 60
+ FF+ + PCAL +FW
Sbjct: 510 DQEAFFHGNSPCALLANFW 528
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 24.6 bits (51), Expect = 1.8
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = -1
Query: 187 SCLWHGFLFSSFFRVIDGGAVFHLNHGLFSMSLFLVLFIEVSGSYEW 47
SCLW+ LF S ++D + +++ + + ++ FI +Y W
Sbjct: 1833 SCLWNDTLFLSKLNIMDYSLIVGIDYTKKELYVGIIDFIR---TYTW 1876
>SPBC1861.04c |||RNA-binding protein Prp24|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1014
Score = 23.8 bits (49), Expect = 3.2
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = -1
Query: 247 DFHSVYKKEYK*VRFGGTFDSCLWHGFLFSSFFRVIDGGAVF 122
D HS++++ Y+ +F + C+W L+ F + G A+F
Sbjct: 148 DAHSLFERAYQTCKFHFSKSQCVW--TLYLEFLQTF-GDALF 186
>SPAC1142.04 |||Noc2p-Noc3p complex subunit Noc2 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 707
Score = 23.4 bits (48), Expect = 4.3
Identities = 10/20 (50%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +2
Query: 71 DKEHKEQ-RHRKKSVIQMKD 127
D+EHKEQ R +KK ++ D
Sbjct: 672 DQEHKEQMRQKKKQALKSDD 691
>SPBC36.09 |sap61||U2 snRNP-associated protein
sap61|Schizosaccharomyces pombe|chr 2|||Manual
Length = 492
Score = 23.4 bits (48), Expect = 4.3
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2
Query: 44 YPLIGARNFDKEHKEQRH 97
Y +G + FDK EQRH
Sbjct: 405 YVYMGRKAFDKHFTEQRH 422
>SPCC736.07c |||cell polarity protein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 699
Score = 23.0 bits (47), Expect = 5.6
Identities = 9/37 (24%), Positives = 20/37 (54%)
Frame = +2
Query: 35 NALYPLIGARNFDKEHKEQRHRKKSVIQMKDGAPVYD 145
N ++ L+G N D ++ + + +++ +G PV D
Sbjct: 52 NHIHLLLGNYNNDLASSIEKKKSELIVRNSEGLPVMD 88
>SPCC1795.02c ||SPCC895.01|CaCA proton/calcium
exchanger|Schizosaccharomyces pombe|chr 3|||Manual
Length = 412
Score = 23.0 bits (47), Expect = 5.6
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = -1
Query: 97 MSLFLVLFIEVSGSYEWIQGV 35
+S+FLV ++ G+ W++GV
Sbjct: 374 VSVFLVNYLIQDGATHWLEGV 394
>SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|chr
2|||Manual
Length = 807
Score = 23.0 bits (47), Expect = 5.6
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = +3
Query: 132 PPSMTLKKELKRNPCHRQLSNVP--PKRTYLYS 224
PPS+ E KR C ++ P P T LYS
Sbjct: 416 PPSIASSPESKRRKCPKKFVARPPVPHPTSLYS 448
>SPBC2A9.05c |||DUF846 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 219
Score = 23.0 bits (47), Expect = 5.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 154 FFRVIDGGAVFHLNHGLFSMSLFLVLFIEV 65
FF + GA+ G+F S F++LFI +
Sbjct: 53 FFLLFRTGAIVAYILGMFFTSSFMLLFIVI 82
>SPCC74.09 |mug24||RNA-binding protein, rrm type|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 654
Score = 23.0 bits (47), Expect = 5.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +1
Query: 184 SCQMSRQNAPTCILFCRQSES 246
SC S+QN T CRQ ES
Sbjct: 383 SCFTSKQNPDTTSDRCRQQES 403
>SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1183
Score = 23.0 bits (47), Expect = 5.6
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +2
Query: 50 LIGARNFDKEHKEQRHRKKSVIQMKDGAPVYDS 148
L ++N K+ + KKS+++ K G P+ D+
Sbjct: 122 LSSSKNLGKQATAKEKLKKSLLEEKLGLPLSDA 154
>SPAPB1E7.11c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 319
Score = 22.6 bits (46), Expect = 7.4
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -3
Query: 215 VGAFWRDI*QLSMARVPLQFLLQSHRRGRRLSFESRTFFYVSVP 84
V F+R R+ L + + +R + F RT+F VS P
Sbjct: 4 VPKFYRAALSDKYKRIVLDAMSRGYRPSEGIWFRVRTYFPVSYP 47
>SPAC3A12.17c |cys12|cys1b|cysteine synthase
Cys12|Schizosaccharomyces pombe|chr 1|||Manual
Length = 395
Score = 22.6 bits (46), Expect = 7.4
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +2
Query: 56 GARNFDKEHKEQRHRKKSVI 115
G+R+F K + E+ RKK+++
Sbjct: 364 GSRHFSKLYNEEFLRKKNIV 383
>SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1142
Score = 22.6 bits (46), Expect = 7.4
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -1
Query: 169 FLFS-SFFRVIDGGAVFHLNHGLFSMSLFLVLFIEVSGSYEWIQGV 35
FLF SF+ +I G +L H + + F +LF+ + ++Q +
Sbjct: 1076 FLFLLSFYSLIYGAEKPYLIHNVVGLYFFWLLFLYAKNGF-FVQNI 1120
>SPBC18E5.01 ||SPBC29A3.19|cycloisomerase 2
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 342
Score = 22.6 bits (46), Expect = 7.4
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3
Query: 126 TAPPSMTLKKELK 164
T PPSMTL+K+ K
Sbjct: 212 TLPPSMTLEKDPK 224
>SPBC19C2.11c |||mitochondrial outer membrane protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 22.6 bits (46), Expect = 7.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 138 SMTLKKELKRNPCHRQLSNVP 200
S+ L+ +++ NP Q SNVP
Sbjct: 81 SLVLQTKIRANPLSVQKSNVP 101
>SPAC10F6.14c |||ABC1 kinase family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 535
Score = 22.2 bits (45), Expect = 9.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 74 KEHKEQRHRKKSVIQMKDGAPVYD 145
K +KE ++ V + DG P+YD
Sbjct: 285 KVYKEISGKRVMVTEWADGIPLYD 308
>SPBC30D10.10c |tor1||phosphatidylinositol kinase
Tor1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2335
Score = 22.2 bits (45), Expect = 9.8
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -1
Query: 70 EVSGSYEWIQGVLQTGKQVRILV 2
EV ++EW+QG Q K++ ++
Sbjct: 127 EVQRAFEWLQGDRQEQKRMAAIL 149
>SPBC839.08c |its8||pig-N |Schizosaccharomyces pombe|chr 2|||Manual
Length = 935
Score = 22.2 bits (45), Expect = 9.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 130 AVFHLNHGLFSMSLFLVLFIEVS 62
A FHL+ +SLF +FI V+
Sbjct: 782 AKFHLSLSHIRISLFFYIFINVA 804
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 981,842
Number of Sequences: 5004
Number of extensions: 15653
Number of successful extensions: 44
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 2,362,478
effective HSP length: 60
effective length of database: 2,062,238
effective search space used: 43306998
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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