Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_I15
         (247 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC146810-1|AAI46811.1| 1099|Homo sapiens NOL8 protein protein.         28   4.8  
BC013788-1|AAH13788.2|  695|Homo sapiens NOL8 protein protein.         28   4.8  
AL136097-11|CAI16206.1| 1099|Homo sapiens nucleolar protein 8 pr...    28   4.8  
AL136097-10|CAI16205.1|  794|Homo sapiens nucleolar protein 8 pr...    28   4.8  
AK024245-1|BAB14857.1|  858|Homo sapiens protein ( Homo sapiens ...    28   4.8  
AK022755-1|BAB14229.1|  846|Homo sapiens protein ( Homo sapiens ...    28   4.8  
AB109030-1|BAC99315.1| 1167|Homo sapiens Nop132 protein.               28   4.8  
AB105104-1|BAD12268.1| 1167|Homo sapiens nucleolar protein 8 pro...    28   4.8  

>BC146810-1|AAI46811.1| 1099|Homo sapiens NOL8 protein protein.
          Length = 1099

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 26  SLKNALYPLIGARNFDKEHKEQRHRKKSVIQMKDGAP 136
           S+K +L   + + N  K+    +H   S+I M+DG+P
Sbjct: 516 SMKKSLKDSVASNN--KDQNSMKHEDPSIISMEDGSP 550


>BC013788-1|AAH13788.2|  695|Homo sapiens NOL8 protein protein.
          Length = 695

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 26  SLKNALYPLIGARNFDKEHKEQRHRKKSVIQMKDGAP 136
           S+K +L   + + N  K+    +H   S+I M+DG+P
Sbjct: 112 SMKKSLKDSVASNN--KDQNSMKHEDPSIISMEDGSP 146


>AL136097-11|CAI16206.1| 1099|Homo sapiens nucleolar protein 8
           protein.
          Length = 1099

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 26  SLKNALYPLIGARNFDKEHKEQRHRKKSVIQMKDGAP 136
           S+K +L   + + N  K+    +H   S+I M+DG+P
Sbjct: 516 SMKKSLKDSVASNN--KDQNSMKHEDPSIISMEDGSP 550


>AL136097-10|CAI16205.1|  794|Homo sapiens nucleolar protein 8
           protein.
          Length = 794

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 26  SLKNALYPLIGARNFDKEHKEQRHRKKSVIQMKDGAP 136
           S+K +L   + + N  K+    +H   S+I M+DG+P
Sbjct: 458 SMKKSLKDSVASNN--KDQNSMKHEDPSIISMEDGSP 492


>AK024245-1|BAB14857.1|  858|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14183 fis, clone NT2RP2004920, weakly similar to
           TRANSCRIPTIONAL REGULATOR ATRX. ).
          Length = 858

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 26  SLKNALYPLIGARNFDKEHKEQRHRKKSVIQMKDGAP 136
           S+K +L   + + N  K+    +H   S+I M+DG+P
Sbjct: 275 SMKKSLKDSVASNN--KDQNSMKHEDPSIISMEDGSP 309


>AK022755-1|BAB14229.1|  846|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12693 fis, clone NT2RP1000324. ).
          Length = 846

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 26  SLKNALYPLIGARNFDKEHKEQRHRKKSVIQMKDGAP 136
           S+K +L   + + N  K+    +H   S+I M+DG+P
Sbjct: 458 SMKKSLKDSVASNN--KDQNSMKHEDPSIISMEDGSP 492


>AB109030-1|BAC99315.1| 1167|Homo sapiens Nop132 protein.
          Length = 1167

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 26  SLKNALYPLIGARNFDKEHKEQRHRKKSVIQMKDGAP 136
           S+K +L   + + N  K+    +H   S+I M+DG+P
Sbjct: 584 SMKKSLKDSVASNN--KDQNSMKHEDPSIISMEDGSP 618


>AB105104-1|BAD12268.1| 1167|Homo sapiens nucleolar protein 8
           protein.
          Length = 1167

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 26  SLKNALYPLIGARNFDKEHKEQRHRKKSVIQMKDGAP 136
           S+K +L   + + N  K+    +H   S+I M+DG+P
Sbjct: 584 SMKKSLKDSVASNN--KDQNSMKHEDPSIISMEDGSP 618


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,311,508
Number of Sequences: 237096
Number of extensions: 536182
Number of successful extensions: 5700
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5700
length of database: 76,859,062
effective HSP length: 59
effective length of database: 62,870,398
effective search space used: 1383148756
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)