BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_I15
(247 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089564-1|AAL90302.1| 422|Drosophila melanogaster RE03692p pro... 27 2.6
AE014296-2966|AAF49301.2| 422|Drosophila melanogaster CG5582-PA... 27 2.6
BT001562-1|AAN71317.1| 753|Drosophila melanogaster RE14391p pro... 27 4.6
AE014296-1245|AAF50571.1| 753|Drosophila melanogaster CG8583-PA... 27 4.6
AY070905-1|AAL48527.1| 1051|Drosophila melanogaster RE02096p pro... 26 8.0
AE014296-3007|AAF49271.2| 1051|Drosophila melanogaster CG13699-P... 26 8.0
>AY089564-1|AAL90302.1| 422|Drosophila melanogaster RE03692p
protein.
Length = 422
Score = 27.5 bits (58), Expect = 2.6
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = -1
Query: 124 FHLNHGLFSMSLFLVLFIEVSGSYEWIQGVLQTG 23
+ +N GLF + F +F++ Y W+ Q G
Sbjct: 272 YFINQGLFELVYFEDIFLDKDSQYRWLNVDYQIG 305
>AE014296-2966|AAF49301.2| 422|Drosophila melanogaster CG5582-PA
protein.
Length = 422
Score = 27.5 bits (58), Expect = 2.6
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = -1
Query: 124 FHLNHGLFSMSLFLVLFIEVSGSYEWIQGVLQTG 23
+ +N GLF + F +F++ Y W+ Q G
Sbjct: 272 YFINQGLFELVYFEDIFLDKDSQYRWLNVDYQIG 305
>BT001562-1|AAN71317.1| 753|Drosophila melanogaster RE14391p
protein.
Length = 753
Score = 26.6 bits (56), Expect = 4.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 2 HEDPYLFASLKNALYPLIGARNFDKEHKEQRHRKKS 109
H+ P++ LK AL L + FDK H Q ++S
Sbjct: 238 HKTPHML--LKRALMVLAASLEFDKRHNSQVQERQS 271
>AE014296-1245|AAF50571.1| 753|Drosophila melanogaster CG8583-PA
protein.
Length = 753
Score = 26.6 bits (56), Expect = 4.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 2 HEDPYLFASLKNALYPLIGARNFDKEHKEQRHRKKS 109
H+ P++ LK AL L + FDK H Q ++S
Sbjct: 238 HKTPHML--LKRALMVLAASLEFDKRHNSQVQERQS 271
>AY070905-1|AAL48527.1| 1051|Drosophila melanogaster RE02096p protein.
Length = 1051
Score = 25.8 bits (54), Expect = 8.0
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 5 EDPYLFASLKNALYPLIGARNFDKEHKEQRHRKKSVIQMKDGAPVYD 145
+ P A +A P GAR +H EQ RK ++ AP Y+
Sbjct: 895 DSPAPNAVYDDAAPPQRGARVIFPDHYEQHIRKGKILNRPTYAPTYE 941
>AE014296-3007|AAF49271.2| 1051|Drosophila melanogaster CG13699-PA
protein.
Length = 1051
Score = 25.8 bits (54), Expect = 8.0
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 5 EDPYLFASLKNALYPLIGARNFDKEHKEQRHRKKSVIQMKDGAPVYD 145
+ P A +A P GAR +H EQ RK ++ AP Y+
Sbjct: 895 DSPAPNAVYDDAAPPQRGARVIFPDHYEQHIRKGKILNRPTYAPTYE 941
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,644,103
Number of Sequences: 53049
Number of extensions: 169457
Number of successful extensions: 433
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 433
length of database: 24,988,368
effective HSP length: 61
effective length of database: 21,752,379
effective search space used: 435047580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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