Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_I12
(436 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 179 9e-46
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 179 9e-46
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 179 9e-46
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 64 3e-11
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z81097-12|CAD56590.1| 457|Caenorhabditis elegans Hypothetical p... 31 0.48
U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical pr... 30 0.83
AC006816-6|ABA00154.1| 506|Caenorhabditis elegans Hypothetical ... 29 1.9
U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like p... 28 2.5
U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like p... 28 2.5
AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like ... 28 2.5
Z78415-9|CAI58633.1| 685|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z78415-8|CAB01675.2| 765|Caenorhabditis elegans Hypothetical pr... 27 5.9
AY912076-1|AAX81408.1| 685|Caenorhabditis elegans extracellular... 27 5.9
AC024826-6|AAF60801.1| 379|Caenorhabditis elegans Hypothetical ... 27 5.9
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 179 bits (435), Expect = 9e-46
Identities = 81/103 (78%), Positives = 89/103 (86%)
Frame = +3
Query: 15 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDA 194
F AQVI++NHPGQISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK ED PK +KSGDA
Sbjct: 306 FHAQVIIMNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDA 365
Query: 195 AIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGANKGCE 323
IV L+P+KPLCVESF ++ PLGRFAVRDMRQTVAVG K E
Sbjct: 366 GIVELIPTKPLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSVE 408
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 179 bits (435), Expect = 9e-46
Identities = 81/103 (78%), Positives = 89/103 (86%)
Frame = +3
Query: 15 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDA 194
F AQVI++NHPGQISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK ED PK +KSGDA
Sbjct: 340 FHAQVIIMNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDA 399
Query: 195 AIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGANKGCE 323
IV L+P+KPLCVESF ++ PLGRFAVRDMRQTVAVG K E
Sbjct: 400 GIVELIPTKPLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSVE 442
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 179 bits (435), Expect = 9e-46
Identities = 81/103 (78%), Positives = 89/103 (86%)
Frame = +3
Query: 15 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDA 194
F AQVI++NHPGQISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK ED PK +KSGDA
Sbjct: 340 FHAQVIIMNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDA 399
Query: 195 AIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGANKGCE 323
IV L+P+KPLCVESF ++ PLGRFAVRDMRQTVAVG K E
Sbjct: 400 GIVELIPTKPLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSVE 442
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 64.5 bits (150), Expect = 3e-11
Identities = 33/97 (34%), Positives = 56/97 (57%)
Frame = +3
Query: 15 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDA 194
F A+V+VL H I++GY+ VL +A + +D++TG+ + K +K +
Sbjct: 431 FDAEVLVLEHRSIIASGYSCVLHIQSAVEEVTVKGVIATIDKKTGE--KKRAKFVKQDEK 488
Query: 195 AIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVG 305
I+ L +P +E F+E+P LGRF +RD +T+A+G
Sbjct: 489 CIMRLESPEPFVLEPFKEYPYLGRFTLRDEGKTIAIG 525
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 41.9 bits (94), Expect = 2e-04
Identities = 22/97 (22%), Positives = 41/97 (42%)
Frame = +3
Query: 15 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDA 194
F +++ I G L H+ + C F + +++ G+ + P+ I G +
Sbjct: 487 FEVRLVAFEIAMPIIKGAKAELYAHSLCVPCTFTNLLYTINKSNGEILKKGPRFIAKGAS 546
Query: 195 AIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVG 305
A+V + + +E+F LGR R T+A G
Sbjct: 547 AVVEIETEYDIAIETFTSCRALGRVTFRAGGNTIAAG 583
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 41.9 bits (94), Expect = 2e-04
Identities = 22/97 (22%), Positives = 41/97 (42%)
Frame = +3
Query: 15 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDA 194
F +++ I G L H+ + C F + +++ G+ + P+ I G +
Sbjct: 505 FEVRLVAFEIAMPIIKGAKAELYAHSLCVPCTFTNLLYTINKSNGEILKKGPRFIAKGAS 564
Query: 195 AIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVG 305
A+V + + +E+F LGR R T+A G
Sbjct: 565 AVVEIETEYDIAIETFTSCRALGRVTFRAGGNTIAAG 601
>Z81097-12|CAD56590.1| 457|Caenorhabditis elegans Hypothetical
protein K07A1.9b protein.
Length = 457
Score = 30.7 bits (66), Expect = 0.48
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 288 ASCHARRNDRGVGTPGRTPHTGAW 217
+SC +NDRG TP R+ +GAW
Sbjct: 15 SSCGYCKNDRGERTPARSAKSGAW 38
>U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical
protein C10G11.6 protein.
Length = 425
Score = 29.9 bits (64), Expect = 0.83
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +2
Query: 80 GLPHSPHSLQICRNQRESRPSYW*INR 160
GL HSPHS N R S P ++ INR
Sbjct: 47 GLVHSPHSSFTTENLRSSDPMFFDINR 73
>AC006816-6|ABA00154.1| 506|Caenorhabditis elegans Hypothetical
protein Y71D11A.1 protein.
Length = 506
Score = 28.7 bits (61), Expect = 1.9
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 112 LPKSKRKSTVVLVNQQRTTLNPLNLVMPPLSTWFPP 219
LPK+ T V + TT+ P +PP +T PP
Sbjct: 264 LPKTTVAPTTTTVPRTTTTVPPTTTTVPPTTTTVPP 299
>U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform b protein.
Length = 564
Score = 28.3 bits (60), Expect = 2.5
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 78 LDCHTAHIACKFAEIKEKVDRRTGKSTE 161
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform a protein.
Length = 690
Score = 28.3 bits (60), Expect = 2.5
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 78 LDCHTAHIACKFAEIKEKVDRRTGKSTE 161
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like
protein protein.
Length = 690
Score = 28.3 bits (60), Expect = 2.5
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 78 LDCHTAHIACKFAEIKEKVDRRTGKSTE 161
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>Z78415-9|CAI58633.1| 685|Caenorhabditis elegans Hypothetical
protein C17G1.6b protein.
Length = 685
Score = 27.1 bits (57), Expect = 5.9
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = +3
Query: 147 GKSTEDNPKSIKSGDAAIVNL-VPS----KPLCVESFQEFPPLGRFAVRDMRQTVAVGAN 311
G + NPK +SG A L +P KP+ V + PP RF R+ AN
Sbjct: 572 GSNNYLNPKLKQSGFARSSTLPLPRISQRKPVFVNELEVHPPTERFLSSSTRRVKRQTAN 631
Query: 312 KGCE 323
+ CE
Sbjct: 632 RFCE 635
>Z78415-8|CAB01675.2| 765|Caenorhabditis elegans Hypothetical
protein C17G1.6a protein.
Length = 765
Score = 27.1 bits (57), Expect = 5.9
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = +3
Query: 147 GKSTEDNPKSIKSGDAAIVNL-VPS----KPLCVESFQEFPPLGRFAVRDMRQTVAVGAN 311
G + NPK +SG A L +P KP+ V + PP RF R+ AN
Sbjct: 652 GSNNYLNPKLKQSGFARSSTLPLPRISQRKPVFVNELEVHPPTERFLSSSTRRVKRQTAN 711
Query: 312 KGCE 323
+ CE
Sbjct: 712 RFCE 715
>AY912076-1|AAX81408.1| 685|Caenorhabditis elegans extracellular
matrix metalloproteaseprotein.
Length = 685
Score = 27.1 bits (57), Expect = 5.9
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = +3
Query: 147 GKSTEDNPKSIKSGDAAIVNL-VPS----KPLCVESFQEFPPLGRFAVRDMRQTVAVGAN 311
G + NPK +SG A L +P KP+ V + PP RF R+ AN
Sbjct: 572 GSNNYLNPKLKQSGFARSSTLPLPRISQRKPVFVNELEVHPPTERFLSSSTRRVKRQTAN 631
Query: 312 KGCE 323
+ CE
Sbjct: 632 RFCE 635
>AC024826-6|AAF60801.1| 379|Caenorhabditis elegans Hypothetical
protein Y55F3AM.9 protein.
Length = 379
Score = 27.1 bits (57), Expect = 5.9
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +3
Query: 114 AEIKEKVDRRTGKSTEDNPKS 176
AEI + +D+ GKSTE++P++
Sbjct: 27 AEILQSLDKSLGKSTEESPEA 47
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,135,939
Number of Sequences: 27780
Number of extensions: 217520
Number of successful extensions: 616
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 615
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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