Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_I12
(436 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 199 1e-53
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 198 3e-53
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 141 4e-36
AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein. 23 2.0
AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein. 23 2.0
AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alph... 23 2.0
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 3.4
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 6.0
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 7.9
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 7.9
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 199 bits (485), Expect = 1e-53
Identities = 92/102 (90%), Positives = 97/102 (95%)
Frame = +3
Query: 9 ADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSG 188
ADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEK DRRTGK+TE+NPKSIKSG
Sbjct: 338 ADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSG 397
Query: 189 DAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGANK 314
DAAIV L P+KP+CVE+FQEFPPLGRFAVRDMRQTVAVG K
Sbjct: 398 DAAIVMLQPTKPMCVEAFQEFPPLGRFAVRDMRQTVAVGVIK 439
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 198 bits (482), Expect = 3e-53
Identities = 91/102 (89%), Positives = 96/102 (94%)
Frame = +3
Query: 9 ADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSG 188
ADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFA+IKEK DRR GK+TE+NPKSIKSG
Sbjct: 338 ADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFADIKEKCDRRNGKTTEENPKSIKSG 397
Query: 189 DAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGANK 314
DAAIV LVPSKP+C E+FQEFPPLGRFAVRDMRQTVAVG K
Sbjct: 398 DAAIVMLVPSKPMCAEAFQEFPPLGRFAVRDMRQTVAVGVIK 439
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 141 bits (341), Expect = 4e-36
Identities = 65/71 (91%), Positives = 68/71 (95%)
Frame = +3
Query: 9 ADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSG 188
ADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEK DRRTGK+TE+NPKSIKSG
Sbjct: 49 ADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSG 108
Query: 189 DAAIVNLVPSK 221
DAAIV L P+K
Sbjct: 109 DAAIVMLQPTK 119
>AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein.
Length = 136
Score = 22.6 bits (46), Expect = 2.0
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +3
Query: 165 NPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMR-QTVAVGANKGCEL 326
NP+ G +V L PS P C ++ P LG + ++G + GC+L
Sbjct: 66 NPEHKPPGPKDLVYLEPSPPFC----EKNPKLGILGTHGRQCNDTSIGVD-GCDL 115
>AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein.
Length = 135
Score = 22.6 bits (46), Expect = 2.0
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +3
Query: 165 NPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMR-QTVAVGANKGCEL 326
NP+ G +V L PS P C ++ P LG + ++G + GC+L
Sbjct: 67 NPEHKPPGPKDLVYLEPSPPFC----EKNPKLGILGTHGRQCNDTSIGVD-GCDL 116
>AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alpha
protein precursor protein.
Length = 153
Score = 22.6 bits (46), Expect = 2.0
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = +3
Query: 321 ELQGSRWWQSHQSCRISHQGQEVASTVN 404
++ GS+ WQ +SC + E ++V+
Sbjct: 62 QVSGSKIWQMERSCMCCQESGEREASVS 89
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 3.4
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 130 KSTVVLVNQQRTTLNPLNLVM 192
KST V +R T+NP ++++
Sbjct: 142 KSTTTTVEVKRDTINPEDVIL 162
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.0 bits (42), Expect = 6.0
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2
Query: 44 PRSNIKRIHTCIGLPHSP 97
P S +R HT G+P P
Sbjct: 1067 PMSEERRQHTAEGVPEQP 1084
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.6 bits (41), Expect = 7.9
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +1
Query: 130 KSTVVLVNQQRTTLNPLNLVM 192
KST+ V +R +NP ++++
Sbjct: 131 KSTITTVEVKRDIINPEDVIL 151
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 7.9
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +1
Query: 130 KSTVVLVNQQRTTLNPLNLVM 192
KST+ V +R +NP ++++
Sbjct: 142 KSTITTVEVKRDIINPEDVIL 162
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,689
Number of Sequences: 438
Number of extensions: 2606
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11368164
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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