Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_I10
         (121 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   1.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   1.8  
M29490-1|AAA27725.1|  109|Apis mellifera protein ( Bee homeobox-...    19   7.3  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    19   7.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    19   7.3  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    18   9.7  

>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.0 bits (42), Expect = 1.4
 Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 7/28 (25%)
 Frame = +3

Query: 36  WGGNQTS-------IDILIKPNTLVNVT 98
           WG  +TS       ++I+++P T +NVT
Sbjct: 294 WGTKETSTRTDAYTVEIVLEPGTGINVT 321


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 64  ISIEVWLPPHVEIRFR 17
           I I V  PPH EI+ +
Sbjct: 769 IFISVQAPPHFEIKLK 784


>M29490-1|AAA27725.1|  109|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone E30. ).
          Length = 109

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 100 RVTFTRVLGLISISIEVW 47
           R   +R LGL    I++W
Sbjct: 50  RQQLSRDLGLTEAQIKIW 67


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +2

Query: 8    AAKAKPNFNVGWQPNFDRYTN 70
            AA    +  V WQP  + ++N
Sbjct: 1121 AALTSQSLQVSWQPPPNTHSN 1141


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +2

Query: 8    AAKAKPNFNVGWQPNFDRYTN 70
            AA    +  V WQP  + ++N
Sbjct: 1117 AALTSQSLQVSWQPPPNTHSN 1137


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +3

Query: 39  GGNQTSIDILIKPN 80
           G N ++ D+L K N
Sbjct: 149 GSNSSNSDVLFKQN 162


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,181
Number of Sequences: 438
Number of extensions: 364
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 20
effective length of database: 137,583
effective search space used:  2614077
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)