Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_I09
(361 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_02_0203 + 12986685-12988691 33 0.067
03_02_0985 - 12961787-12961984,12963177-12963337,12965332-129654... 31 0.27
01_06_0148 - 27007330-27008124 30 0.48
07_03_1577 - 27869596-27869682,27869769-27869869,27869956-278699... 30 0.63
03_06_0078 + 31505126-31507933 29 0.83
10_08_0435 + 17905728-17905901,17906608-17906931,17907205-179073... 29 1.5
06_03_0355 + 19822110-19824491 28 1.9
05_07_0354 - 29507068-29507170,29507406-29507431,29508264-295083... 28 1.9
07_03_0735 + 21075033-21075846,21077065-21077199,21077384-210775... 27 3.4
06_01_1159 - 9852316-9852441,9852743-9852838,9852912-9852977,985... 27 3.4
03_02_0755 + 10932897-10933010,10933446-10933577,10933666-109337... 27 3.4
12_02_0800 + 23299674-23299678,23299714-23299791,23299876-232999... 27 4.4
01_05_0420 + 21969797-21970939,21971307-21971369,21971488-219716... 27 4.4
01_01_0147 - 1332752-1333447,1333557-1333739 27 4.4
08_02_1236 + 25454371-25456801,25456891-25457177,25457258-254574... 27 5.9
03_04_0054 + 16883678-16883719,16884667-16884723,16884852-168849... 27 5.9
01_01_0922 + 7278912-7279274,7281449-7281572,7282489-7282604,728... 27 5.9
11_04_0152 + 14153539-14154060 26 7.7
06_01_0591 + 4261483-4261631,4261837-4262007,4262127-4262226,426... 26 7.7
03_05_1025 + 29811918-29811977,29812044-29812595 26 7.7
03_05_0070 - 20478396-20478505,20478605-20478780,20481162-204812... 26 7.7
02_03_0171 + 15945591-15945681,15947068-15947138,15947715-159478... 26 7.7
>06_02_0203 + 12986685-12988691
Length = 668
Score = 33.1 bits (72), Expect = 0.067
Identities = 24/90 (26%), Positives = 44/90 (48%)
Frame = +3
Query: 48 SCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDATSLKHTETQEKNPLPDKDVVAA 227
S L ++ T + V+ + + + T K D E T+L + + P+P+ + +AA
Sbjct: 459 SLLLEISTRAEGVVAAVDALGTTAKFKKA-DHAEPPATTTL---DAEAAMPVPNSNAIAA 514
Query: 228 EKAHQNLLEGVEHFDKTQMKHTTTEEKNSL 317
++AH N G EH K + TTT +++
Sbjct: 515 DEAHGNATAG-EHDKKETAEQTTTTSASTV 543
>03_02_0985 - 12961787-12961984,12963177-12963337,12965332-12965489,
12966015-12966105,12966715-12966752,12966994-12967154,
12967249-12968687,12968815-12969227,12969630-12970987,
12971089-12971454,12971533-12971696,12971748-12971820,
12972967-12973113
Length = 1588
Score = 31.1 bits (67), Expect = 0.27
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +3
Query: 66 DTNEKIVLPSAEDVATEKTQKSLFDGIEKFDATSLKHTETQ-EKNPLPDKDVVAAEKAHQ 242
D EK + +DVA + K GIE D + K T + E N L D + ++
Sbjct: 927 DILEKTKRINDDDVAFHEKMKEHRAGIETLDLSGKKKTVKEWEDNRLSSMDHTSKGGDNE 986
Query: 243 NLLEGVEHFDKTQMKHTTTEEKNSL 317
NL E + K++ + ++ N+L
Sbjct: 987 NLNERLSKIKKSEARPEEVQDANAL 1011
>01_06_0148 - 27007330-27008124
Length = 264
Score = 30.3 bits (65), Expect = 0.48
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +2
Query: 185 PGEEPSA*QRCCRSGKGTSELTGRRRALRQNANEAHDDGREEF 313
P P++ +RC +SG S L RR + R +H DG+E+F
Sbjct: 143 PSTTPASPRRCRKSGSTGSVLRWRRISERL-VRRSHSDGKEKF 184
>07_03_1577 -
27869596-27869682,27869769-27869869,27869956-27869995,
27870879-27870953
Length = 100
Score = 29.9 bits (64), Expect = 0.63
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +3
Query: 15 DLKSQLEGFNTSCLRDVDTNEKIVL 89
DL+S+L+ NT CL + + N+K+++
Sbjct: 54 DLQSKLDAVNTECLAEKEKNKKLII 78
>03_06_0078 + 31505126-31507933
Length = 935
Score = 29.5 bits (63), Expect = 0.83
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 129 SLFDGIEKFDATSLKHTETQEKNPLPDKDVVAAEKAHQNLLEGVEH-FDKTQMKHTTTEE 305
S F G + TS K ++P+PD VV+ + A +++ + +EH D T+ +
Sbjct: 536 SWFSGRKNVKKTSPKVLSKLRRSPIPDNHVVSFDAAVRSVSQELEHGKDFTEEDCSQNGI 595
Query: 306 KNSLP 320
KN +P
Sbjct: 596 KNVVP 600
>10_08_0435 +
17905728-17905901,17906608-17906931,17907205-17907321,
17908418-17908597,17909064-17909190,17909327-17909440,
17909794-17909909
Length = 383
Score = 28.7 bits (61), Expect = 1.5
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +3
Query: 87 LPSAEDV--ATEKTQKSLFDGIEKFDATSLKHTETQEKNPLPDKDVVAAEKAHQNLLEGV 260
L SAED+ A + F + K+D T + T+ E NP K ++ +AH+ L
Sbjct: 244 LESAEDIRSACHSNRAVCFLKLGKYDETIKECTKALELNPSYLKALLRRGEAHEKL---- 299
Query: 261 EHFDK 275
EH+D+
Sbjct: 300 EHYDE 304
>06_03_0355 + 19822110-19824491
Length = 793
Score = 28.3 bits (60), Expect = 1.9
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +3
Query: 54 LRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDATSLKHTET---QEKNPLPDKDVVA 224
+ +V +++LP+ E+VATE + +E DA SL T +E +P+ D
Sbjct: 203 VEEVSVTHEVMLPNYEEVATEGDGDTAMAAVEN-DAGSLAETVVMTHEEFVAVPEDDEEE 261
Query: 225 AEKAHQNLLEGV 260
A+ +N G+
Sbjct: 262 ADGDEENDATGL 273
>05_07_0354 -
29507068-29507170,29507406-29507431,29508264-29508301,
29508722-29508825,29509005-29509024,29509251-29509299,
29510319-29510406,29510463-29510562,29510660-29510737,
29512688-29512804,29513718-29513821,29514497-29514569,
29514904-29514981,29515091-29515215,29515278-29515341,
29515439-29515597,29515950-29516048,29516496-29516624,
29517010-29517075,29517160-29517304,29517379-29517500,
29517683-29517838,29517918-29518029,29518891-29519036,
29519148-29519252,29519391-29519540,29519703-29519776,
29519902-29520055,29520142-29520408
Length = 1016
Score = 28.3 bits (60), Expect = 1.9
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +3
Query: 150 KFDATSLKHTETQEKNPLPDKDVVAAEKAHQNLLEGVEHFDKTQMKHTTTEEK 308
K+D ++ E QEK K + K ++ VE K +M HT+ ++
Sbjct: 262 KYDMKKKEYKEAQEKEKTEKKKMEEVAKIWEDSKGPVEELKKKKMSHTSNTKR 314
>07_03_0735 +
21075033-21075846,21077065-21077199,21077384-21077517,
21077604-21077814,21078033-21078270,21078346-21078496,
21078593-21078931
Length = 673
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 78 KIVLPSAEDVATEKTQKSLFDGIEKFDATSLKHTETQEKN 197
K VLPS E++A ++ S GIE+ + + Q+KN
Sbjct: 361 KGVLPSGEEIAVKRLSMSSGQGIEELKNELVLVAKLQQKN 400
>06_01_1159 -
9852316-9852441,9852743-9852838,9852912-9852977,
9853091-9853180,9853262-9853373,9853515-9853598,
9853864-9853940,9854823-9854873,9854924-9855031,
9855703-9855774,9856952-9857011,9857808-9857876,
9858005-9858088,9858212-9858295,9859106-9859198,
9859930-9860030,9861155-9861264,9863058-9863104,
9863693-9863778,9863940-9864012,9864454-9864540,
9864650-9865301,9866164-9867182,9867702-9867797
Length = 1180
Score = 27.5 bits (58), Expect = 3.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 221 RSGKGTSELTGRRRALRQNANEAHDDGREE 310
+SG GT + T RR++ EA +D +EE
Sbjct: 173 KSGTGTKKTTTRRKSPTSRKKEASEDMKEE 202
>03_02_0755 +
10932897-10933010,10933446-10933577,10933666-10933750,
10934668-10934831,10934911-10935357
Length = 313
Score = 27.5 bits (58), Expect = 3.4
Identities = 17/73 (23%), Positives = 26/73 (35%), Gaps = 1/73 (1%)
Frame = +3
Query: 36 GFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDATSLKHTETQEKNPLPDKD 215
G NT+ N + P +E + + +G+ +L P P
Sbjct: 208 GVNTAGSNSDSVNNDLPRPDSESEIVQHIVEGRTEGVSNHSRANLSRENIPRVAPTPQNP 267
Query: 216 VVAAEK-AHQNLL 251
VVA +K H LL
Sbjct: 268 VVAIQKPKHDRLL 280
>12_02_0800 +
23299674-23299678,23299714-23299791,23299876-23299920,
23300052-23300415,23300493-23300574,23300793-23300873,
23300974-23302106,23302202-23302350,23302426-23302516,
23303628-23305940
Length = 1446
Score = 27.1 bits (57), Expect = 4.4
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 75 EKIVLPSAEDVATEKTQKSLFDGIEKFDATSLKHTETQEKNPLPDKDVVA 224
E+I+ +++ KT + ++DG F TSL + + Q+ P P VA
Sbjct: 222 EEILSSNSQSADNIKTDQHVYDGGAPFPGTSLPN-KAQQPQPYPGNFCVA 270
>01_05_0420 +
21969797-21970939,21971307-21971369,21971488-21971616,
21972241-21972291,21972669-21972809,21972922-21973122,
21973201-21973419,21973582-21973700,21973772-21973862,
21975864-21975965,21976291-21976315,21976522-21976592
Length = 784
Score = 27.1 bits (57), Expect = 4.4
Identities = 20/95 (21%), Positives = 39/95 (41%), Gaps = 1/95 (1%)
Frame = +3
Query: 42 NTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDATSLKHTETQEKNPL-PDKDV 218
N C+R V+P+AE +T +KS + + A + T Q+ + + +
Sbjct: 495 NGMCIRGDKCKFSHVIPTAEGPSTPDAKKSNASSVPE-KANCQEQTSRQKTSTVYSGEPA 553
Query: 219 VAAEKAHQNLLEGVEHFDKTQMKHTTTEEKNSLPT 323
+ H ++L+ + K + EK+ PT
Sbjct: 554 TSVPIKHHSILKNLAGISGNAQKDVVSTEKHKNPT 588
>01_01_0147 - 1332752-1333447,1333557-1333739
Length = 292
Score = 27.1 bits (57), Expect = 4.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 230 KGTSELTGRRRALRQNANEAHDDGREE 310
KGT + TG + R + N+A DG++E
Sbjct: 7 KGTMDNTGTPKRTRWSENKAQQDGKDE 33
>08_02_1236 +
25454371-25456801,25456891-25457177,25457258-25457416,
25457561-25457740,25457823-25458017,25459059-25459157,
25459508-25460137,25460250-25460591
Length = 1440
Score = 26.6 bits (56), Expect = 5.9
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +3
Query: 12 NDLKSQLEGFNTSCLRDVDTN--EKIVLPSAEDVATEKTQKSLFDGIEKFDATSLKHTET 185
N L+++ + L D T+ ++ + S D A + S +EK D T++ TET
Sbjct: 543 NLLENRADDNREDALEDAFTSGIDEAAITSGVDEAAMEADAST---VEKNDDTAIDGTET 599
Query: 186 QEKNPLPDKDVV 221
+EK+ + D++
Sbjct: 600 KEKHEKTNDDIL 611
>03_04_0054 +
16883678-16883719,16884667-16884723,16884852-16884959,
16885028-16885102,16885744-16885833,16885950-16886057,
16886137-16886211,16886371-16886433,16886531-16886924,
16888539-16888651,16888799-16888829,16888987-16889864
Length = 677
Score = 26.6 bits (56), Expect = 5.9
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 3 RGANDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQK 128
RGA D G N +C+ + TNE + E+V + +K
Sbjct: 587 RGAEDSHCNKNGENVACVENGKTNEAGNTENGENVVSHDAEK 628
>01_01_0922 +
7278912-7279274,7281449-7281572,7282489-7282604,
7282683-7282748,7283379-7283413,7283559-7283601,
7284325-7284362,7284448-7284555,7287195-7287252,
7287862-7288003,7288215-7288426,7288544-7288778,
7288874-7288941,7290329-7290602,7291137-7291249,
7291330-7291390,7292170-7292237,7292585-7292622,
7292699-7292888
Length = 783
Score = 26.6 bits (56), Expect = 5.9
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +3
Query: 66 DTNEKIVLPSAEDVATEKTQKSLFDGIEKFDATSLKHTETQEKNPLPD-KDVVAAEKA-H 239
+T KI+ PS+++ + + I K K E K+P+ D ++ A H
Sbjct: 497 ETGVKIIFPSSKEETCVVLEAKTTEDIRKASEKIAKVLEEAVKSPILDYSHFISLPLAIH 556
Query: 240 QNLLEGVEHF 269
+L+E + HF
Sbjct: 557 PSLVEKLNHF 566
>11_04_0152 + 14153539-14154060
Length = 173
Score = 26.2 bits (55), Expect = 7.7
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +2
Query: 179 RNPGEEPSA*QRCCRSGKGTSELTGRRRALRQNANEAHDDG 301
R P E + CCR G + L G+RRA R + G
Sbjct: 83 RRPEAEQWRQRHCCRRGCTSGGLHGKRRAGRGRGGDCDAGG 123
>06_01_0591 + 4261483-4261631,4261837-4262007,4262127-4262226,
4263151-4263315,4263416-4263544,4263758-4263858,
4264527-4264596,4265080-4265331,4265828-4265897,
4266281-4266341,4266916-4267003,4267746-4267830,
4268168-4268234,4268442-4268559,4268843-4268923,
4269022-4269267,4269670-4269771,4269847-4269914,
4270040-4270171,4270283-4270430,4270504-4270790,
4270920-4271067,4271156-4271331,4271407-4271518,
4271614-4271667,4273134-4273244,4273317-4273478,
4273627-4273814,4273948-4274137,4274297-4274464,
4274832-4274912
Length = 1359
Score = 26.2 bits (55), Expect = 7.7
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Frame = -1
Query: 196 FFSWVSVCFKLVASNFSIPSNR---DFWV-FSVATSSADGRTIF 77
F W S+ F + S F + ++R D W+ + V TS+A RTIF
Sbjct: 902 FAGW-SIAFLICLSVFLMQASRNGNDLWLTYWVDTSTASSRTIF 944
>03_05_1025 + 29811918-29811977,29812044-29812595
Length = 203
Score = 26.2 bits (55), Expect = 7.7
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -2
Query: 228 PLRQHLCQAEGSSPGFLYVSNWW 160
PL H+ A P F YVSNW+
Sbjct: 3 PLPMHMDHASCIWPPFTYVSNWF 25
>03_05_0070 -
20478396-20478505,20478605-20478780,20481162-20481265,
20481346-20481504,20481718-20481857,20482222-20482311,
20482902-20482970,20484295-20484516,20486175-20486293,
20486377-20486492,20488058-20488146,20488790-20488883
Length = 495
Score = 26.2 bits (55), Expect = 7.7
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 12 NDLKSQLEGFNTSCLRDVDTNEKI 83
+DLKS+LEG+NT D++ + +
Sbjct: 273 HDLKSELEGYNTGDSDDINKKKAL 296
>02_03_0171 +
15945591-15945681,15947068-15947138,15947715-15947817,
15948189-15948328,15948535-15948693,15948775-15948878,
15950373-15950548,15952643-15952832,15953704-15953803,
15954171-15954339,15954908-15954990,15955073-15955149,
15955386-15955557
Length = 544
Score = 26.2 bits (55), Expect = 7.7
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 12 NDLKSQLEGFNTSCLRDVDTNEKI 83
+DLKS+LEG+NT D++ + +
Sbjct: 95 HDLKSELEGYNTGDSDDINKKKAL 118
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,881,181
Number of Sequences: 37544
Number of extensions: 176241
Number of successful extensions: 580
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 579
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 554421256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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