Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_I07
         (300 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118521-1|AAM49890.1|  774|Drosophila melanogaster LD17982p pro...    28   2.5  
AE014134-2948|AAF53681.1|  774|Drosophila melanogaster CG10414-P...    28   2.5  
AE013599-2286|AAF57993.2|  214|Drosophila melanogaster CG15712-P...    27   5.8  

>AY118521-1|AAM49890.1|  774|Drosophila melanogaster LD17982p
          protein.
          Length = 774

 Score = 27.9 bits (59), Expect = 2.5
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -2

Query: 56 CRHHHHLRLVPNSCSPGD 3
          CR   H++ +P++C+PGD
Sbjct: 32 CRRMVHIKCLPHACTPGD 49


>AE014134-2948|AAF53681.1|  774|Drosophila melanogaster CG10414-PA
          protein.
          Length = 774

 Score = 27.9 bits (59), Expect = 2.5
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -2

Query: 56 CRHHHHLRLVPNSCSPGD 3
          CR   H++ +P++C+PGD
Sbjct: 32 CRRMVHIKCLPHACTPGD 49


>AE013599-2286|AAF57993.2|  214|Drosophila melanogaster CG15712-PA
           protein.
          Length = 214

 Score = 26.6 bits (56), Expect = 5.8
 Identities = 12/46 (26%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = -1

Query: 135 QYFNFTLKFKSLF*LIFT-KFISSWRHLQASPSFTPRAEFMQPGGS 1
           +Y+ F  KF+     + + +FI++W+ ++A+P F     ++   GS
Sbjct: 48  RYYIFDPKFRQAVEFVRSDEFIATWQQVRATPDFVNIINYVSDYGS 93


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,231,999
Number of Sequences: 53049
Number of extensions: 181105
Number of successful extensions: 267
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 267
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 549010566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)