Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_I06
         (152 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73972-10|CAA98263.2|  388|Caenorhabditis elegans Hypothetical p...    27   2.4  
AL021474-8|CAA16310.2|  388|Caenorhabditis elegans Hypothetical ...    27   2.4  
Z78410-8|CAB01642.1|  556|Caenorhabditis elegans Hypothetical pr...    25   5.5  
Z78410-7|CAB01635.1|  652|Caenorhabditis elegans Hypothetical pr...    25   5.5  
U04995-1|AAA56868.1|  652|Caenorhabditis elegans prohormone conv...    25   5.5  
AC024796-11|AAK29890.2|  828|Caenorhabditis elegans Hypothetical...    25   9.6  

>Z73972-10|CAA98263.2|  388|Caenorhabditis elegans Hypothetical
           protein F15H10.4 protein.
          Length = 388

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -3

Query: 90  RWAGEVFSPIPTGPLHDEARWVRSSCRIQ 4
           RWAG +F   P G L +EAR  R+   ++
Sbjct: 261 RWAGNLFKIGPYGKLLEEARKERNDALVK 289


>AL021474-8|CAA16310.2|  388|Caenorhabditis elegans Hypothetical
           protein F15H10.4 protein.
          Length = 388

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -3

Query: 90  RWAGEVFSPIPTGPLHDEARWVRSSCRIQ 4
           RWAG +F   P G L +EAR  R+   ++
Sbjct: 261 RWAGNLFKIGPYGKLLEEARKERNDALVK 289


>Z78410-8|CAB01642.1|  556|Caenorhabditis elegans Hypothetical
           protein C51E3.7b protein.
          Length = 556

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +1

Query: 19  GANPPGLVVQWPSGDGGE 72
           G N  G +  W SGDGGE
Sbjct: 207 GRNGLGSIFVWASGDGGE 224


>Z78410-7|CAB01635.1|  652|Caenorhabditis elegans Hypothetical
           protein C51E3.7a protein.
          Length = 652

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +1

Query: 19  GANPPGLVVQWPSGDGGE 72
           G N  G +  W SGDGGE
Sbjct: 303 GRNGLGSIFVWASGDGGE 320


>U04995-1|AAA56868.1|  652|Caenorhabditis elegans prohormone
           convertase 2 protein.
          Length = 652

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +1

Query: 19  GANPPGLVVQWPSGDGGE 72
           G N  G +  W SGDGGE
Sbjct: 303 GRNGLGSIFVWASGDGGE 320


>AC024796-11|AAK29890.2|  828|Caenorhabditis elegans Hypothetical
           protein Y48G1C.8 protein.
          Length = 828

 Score = 24.6 bits (51), Expect = 9.6
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +1

Query: 49  WPSGDGGEYFSSPPLRPRMEA*PNSEDSGR 138
           W S  G ++F+ P ++P +   P +  +GR
Sbjct: 253 WSSTGGEQHFNDPVIKPNVRRHPVARLNGR 282


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,975,473
Number of Sequences: 27780
Number of extensions: 94429
Number of successful extensions: 261
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 261
length of database: 12,740,198
effective HSP length: 31
effective length of database: 11,879,018
effective search space used: 225701342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)