Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_I06
         (152 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    22   0.61 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   1.8  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    20   2.4  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    20   2.4  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    20   3.2  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              19   4.3  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    19   4.3  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    19   5.6  
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    19   5.6  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    19   7.5  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    19   7.5  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    19   7.5  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    19   7.5  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    19   7.5  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        19   7.5  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    19   7.5  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    19   7.5  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    19   7.5  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    18   9.9  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    18   9.9  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    18   9.9  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 22.2 bits (45), Expect = 0.61
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 85  GWRSILPHPHWAIARRGPVGSLL 17
           G   + P+P+WA  + G  GS +
Sbjct: 105 GSPKLTPYPNWAQNKAGACGSAI 127


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 11/38 (28%), Positives = 15/38 (39%)
 Frame = +3

Query: 30   TGPRRAMAQWGWGRILLQPTSSPQNGGMTQQ*RFREAG 143
            T P      W    + ++PT    N    +Q   REAG
Sbjct: 1145 TRPDTDSENWTPKMMAVEPTDKQANSKTRRQEMMREAG 1182


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -2

Query: 85  GWRSILPHPHWAIAR 41
           G R + P+P W+ A+
Sbjct: 105 GGRLLQPYPDWSFAK 119


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 11/31 (35%), Positives = 13/31 (41%), Gaps = 2/31 (6%)
 Frame = -1

Query: 113 HASILGRRGGLEKYSPPSPLGHC--TTRPGG 27
           H S +   GG    SP   +GH   T  P G
Sbjct: 100 HGSGMDGMGGYRSASPSPGMGHMGHTPTPNG 130


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 149 SISCLPESSLLGHASI 102
           S SCLPE  L  H ++
Sbjct: 433 SESCLPEEILCPHFNV 448


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 19.4 bits (38), Expect = 4.3
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 62 SPLGHCTTRP 33
          SP  HC TRP
Sbjct: 17 SPSVHCGTRP 26



 Score = 18.2 bits (35), Expect = 9.9
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = -2

Query: 136 SRNLHCWVMPPFWGEEV 86
           S ++HC   P F  +E+
Sbjct: 17  SPSVHCGTRPSFVSDEM 33


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 19.4 bits (38), Expect = 4.3
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 85  GWRSILPHPHWAIA 44
           G R + P+P W+ A
Sbjct: 101 GGRLLKPYPDWSFA 114


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
          protein.
          Length = 377

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = -2

Query: 76 SILPHPHW 53
          S L HPHW
Sbjct: 39 SDLVHPHW 46


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = -2

Query: 109 PPFWGEE 89
           PPFW E+
Sbjct: 110 PPFWDED 116


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 18.6 bits (36), Expect = 7.5
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +1

Query: 73  YFSSPPLRPRME 108
           Y   PPL PR E
Sbjct: 162 YRFRPPLNPRFE 173


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 18.6 bits (36), Expect = 7.5
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +1

Query: 73  YFSSPPLRPRME 108
           Y   PPL PR E
Sbjct: 165 YRFRPPLNPRFE 176


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 18.6 bits (36), Expect = 7.5
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +1

Query: 73  YFSSPPLRPRME 108
           Y   PPL PR E
Sbjct: 165 YRFRPPLNPRFE 176


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 18.6 bits (36), Expect = 7.5
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +1

Query: 73  YFSSPPLRPRME 108
           Y   PPL PR E
Sbjct: 165 YRFRPPLNPRFE 176


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 18.6 bits (36), Expect = 7.5
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +1

Query: 73  YFSSPPLRPRME 108
           Y   PPL PR E
Sbjct: 165 YRFRPPLNPRFE 176


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 18.6 bits (36), Expect = 7.5
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = -1

Query: 131 ESSLLGHASILGRRGGLEKYSPPSPLGHCTTRPGGFA 21
           ESSL   A         ++++ PSP G      G  A
Sbjct: 40  ESSLSAAAVAAAAVNYAQQHNSPSPTGSSPQHSGSSA 76


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 18.6 bits (36), Expect = 7.5
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +1

Query: 73  YFSSPPLRPRME 108
           Y   PPL PR E
Sbjct: 385 YRFRPPLNPRFE 396


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 18.6 bits (36), Expect = 7.5
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -1

Query: 149 SISCLPESSLLGHASILGRRGGLEKY 72
           S S      L   +S+  RRGGLE +
Sbjct: 26  SFSSAKLEKLYRASSLQQRRGGLEYF 51


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 18.6 bits (36), Expect = 7.5
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -3

Query: 129 IFTVGSCLHSGAKRWAGEVFSPIP 58
           I+   +CL + + R   ++ SP P
Sbjct: 639 IYENQNCLDASSSRRGSKIGSPTP 662


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 18.2 bits (35), Expect = 9.9
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 79  SSPPLRPRMEA*PNSEDS 132
           SSP   PR+ + P+S  S
Sbjct: 509 SSPSPNPRIASAPSSSTS 526


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 18.2 bits (35), Expect = 9.9
 Identities = 4/9 (44%), Positives = 6/9 (66%)
 Frame = -2

Query: 106 PFWGEEVGW 80
           P+W   +GW
Sbjct: 525 PWWSHVLGW 533


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 18.2 bits (35), Expect = 9.9
 Identities = 4/9 (44%), Positives = 6/9 (66%)
 Frame = -2

Query: 106 PFWGEEVGW 80
           P+W   +GW
Sbjct: 578 PWWSHVLGW 586


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,109
Number of Sequences: 438
Number of extensions: 1739
Number of successful extensions: 22
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 30
effective length of database: 133,203
effective search space used:  2664060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)