Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_I04
         (249 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   0.31 
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    25   0.54 
AF513636-1|AAM53608.1|  222|Anopheles gambiae glutathione S-tran...    24   0.95 
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    22   2.9  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    21   5.1  
L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier prot...    21   6.7  
L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier prot...    21   6.7  
AY344816-1|AAR02427.1|  257|Anopheles gambiae CP5039 protein.          21   6.7  
AY344815-1|AAR02426.1|  257|Anopheles gambiae CP5039 protein.          21   6.7  
AY227001-1|AAO32818.2|  301|Anopheles gambiae ADP/ATP translocas...    21   6.7  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    21   8.8  
AY344819-1|AAR02430.1|  257|Anopheles gambiae CP5039 protein.          21   8.8  
AY344818-1|AAR02429.1|  257|Anopheles gambiae CP5039 protein.          21   8.8  
AY344817-1|AAR02428.1|  257|Anopheles gambiae CP5039 protein.          21   8.8  
AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...    21   8.8  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 25.4 bits (53), Expect = 0.31
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -2

Query: 68  VYCKKRVGPYCSTSGKSPR 12
           +Y    V PYCST  K PR
Sbjct: 51  IYIPPPVPPYCSTECKGPR 69


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = -2

Query: 248 LSPMSFESTIANTTRSRV 195
           LSP+SF  T++N++ SRV
Sbjct: 753 LSPISFNYTLSNSSLSRV 770


>AF513636-1|AAM53608.1|  222|Anopheles gambiae glutathione
           S-transferase D6 protein.
          Length = 222

 Score = 23.8 bits (49), Expect = 0.95
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 83  IISPSCVYRPLISRWLSCRLKLHGID 160
           IISP C    L ++WL   L L  +D
Sbjct: 10  IISPPCRVVLLFAKWLKLELNLIELD 35


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 10/46 (21%), Positives = 21/46 (45%)
 Frame = -2

Query: 239 MSFESTIANTTRSRVRHNKCEIFICTDQYRVTSNDKTTIG*SEGDI 102
           ++ + T  +      R   C+I I +D Y V +N+   +  + G +
Sbjct: 9   LNHDQTAQDLLLQSARAEGCDILIISDPYWVPNNNSNWVTDTTGRV 54


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 130 QPSANQRAIYT*RRDDRVKKRYIVKNEWGP 41
           QP    RA++   R + ++K  I   EW P
Sbjct: 85  QPDRPMRALFCLTRTNPLRKLCIAIVEWKP 114


>L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +1

Query: 13  RGDFPDVLQ*GPTRFLQYTFS*PYHLAFM 99
           RG+  +V++  PT+ L + F   Y   F+
Sbjct: 74  RGNLANVIRYFPTQALNFAFKDVYKQVFL 102


>L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +1

Query: 13  RGDFPDVLQ*GPTRFLQYTFS*PYHLAFM 99
           RG+  +V++  PT+ L + F   Y   F+
Sbjct: 74  RGNLANVIRYFPTQALNFAFKDVYKQVFL 102


>AY344816-1|AAR02427.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -2

Query: 227 STIANTTRSRVRHNKCEIFICTDQYRVTSNDK 132
           S  A   +  + HN+ E F+ T+Q  + +  K
Sbjct: 179 SNAAGLKQLLLSHNRLERFVATEQVNLAALHK 210


>AY344815-1|AAR02426.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -2

Query: 227 STIANTTRSRVRHNKCEIFICTDQYRVTSNDK 132
           S  A   +  + HN+ E F+ T+Q  + +  K
Sbjct: 179 SNAAGLKQLLLSHNRLERFVATEQVNLAALHK 210


>AY227001-1|AAO32818.2|  301|Anopheles gambiae ADP/ATP translocase
           protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +1

Query: 13  RGDFPDVLQ*GPTRFLQYTFS*PYHLAFM 99
           RG+  +V++  PT+ L + F   Y   F+
Sbjct: 74  RGNLANVIRYFPTQALNFAFKDVYKQVFL 102


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 8   RHEEISPTYCNRAPLVFYNI 67
           RHE+  P      P +F+NI
Sbjct: 227 RHEKYYPCCAEPYPDIFFNI 246


>AY344819-1|AAR02430.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -2

Query: 227 STIANTTRSRVRHNKCEIFICTDQYRVTSNDK 132
           S  A   +  + HN+ E F+ T+Q  + +  K
Sbjct: 179 SNAAGLKQLLLSHNRLERFVVTEQVNLAALHK 210


>AY344818-1|AAR02429.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -2

Query: 227 STIANTTRSRVRHNKCEIFICTDQYRVTSNDK 132
           S  A   +  + HN+ E F+ T+Q  + +  K
Sbjct: 179 SNAAGLKQLLLSHNRLERFVVTEQVNLAALHK 210


>AY344817-1|AAR02428.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -2

Query: 227 STIANTTRSRVRHNKCEIFICTDQYRVTSNDK 132
           S  A   +  + HN+ E F+ T+Q  + +  K
Sbjct: 179 SNAAGLKQLLLSHNRLERFVVTEQVNLAALHK 210


>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 62  CKKRVGPYCSTSGKS 18
           C+K   PYC   GK+
Sbjct: 180 CRKMGVPYCIIKGKA 194


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 279,975
Number of Sequences: 2352
Number of extensions: 5277
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 53
effective length of database: 439,323
effective search space used: 12740367
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)