Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_I04
(249 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 26 0.081
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 26 0.081
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 25 0.11
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 25 0.11
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 25 0.14
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 21 1.7
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 21 1.7
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 20 5.3
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 19 7.1
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 19 9.3
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 19 9.3
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 19 9.3
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 25.8 bits (54), Expect = 0.081
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = +2
Query: 53 VFYNIPFLDPIISPSCVYRPL-ISRW 127
VFY IPF P I P +PL I W
Sbjct: 61 VFYGIPFAKPPIGPLRFRKPLPIEPW 86
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 25.8 bits (54), Expect = 0.081
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = +2
Query: 53 VFYNIPFLDPIISPSCVYRPL-ISRW 127
VFY IPF P I P +PL I W
Sbjct: 61 VFYGIPFAKPPIGPLRFRKPLPIEPW 86
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.4 bits (53), Expect = 0.11
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 32 YCNRAPLVFYNIPFLDPIISPSCVY 106
YCN ++YNI +++ I P +Y
Sbjct: 100 YCNNYKKLYYNINYIEQIPIPVPIY 124
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.4 bits (53), Expect = 0.11
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 32 YCNRAPLVFYNIPFLDPIISPSCVY 106
YCN ++YNI +++ I P +Y
Sbjct: 100 YCNNYKKLYYNINYIEQIPIPVPIY 124
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.0 bits (52), Expect = 0.14
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 32 YCNRAPLVFYNIPFLDPIISPSCVY 106
YCN ++YNI +++ I P +Y
Sbjct: 100 YCNNYRKLYYNINYIEQIPIPVPIY 124
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 21.4 bits (43), Expect = 1.7
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +1
Query: 13 RGDFPDVLQ*GPTRFLQYTFS*PYHLAFM 99
RG+ +V++ PT+ L + F Y F+
Sbjct: 74 RGNLANVIRYFPTQALNFAFKDKYKQVFL 102
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 21.4 bits (43), Expect = 1.7
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +1
Query: 13 RGDFPDVLQ*GPTRFLQYTFS*PYHLAFM 99
RG+ +V++ PT+ L + F Y F+
Sbjct: 74 RGNLANVIRYFPTQALNFAFKDKYKQVFL 102
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 19.8 bits (39), Expect = 5.3
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = -2
Query: 62 CKKRVGPYCSTSGK 21
C +R P C+++GK
Sbjct: 110 CPRRHRPVCASNGK 123
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 19.4 bits (38), Expect = 7.1
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 11 HEEISPTYCNRAPLV 55
HE++SPT+ PLV
Sbjct: 497 HEDVSPTF--EKPLV 509
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 19.0 bits (37), Expect = 9.3
Identities = 6/16 (37%), Positives = 10/16 (62%)
Frame = +1
Query: 121 PMVVLSFEVTRY*SVH 168
PMV ++++ Y VH
Sbjct: 78 PMVDFGYDISNYTDVH 93
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 19.0 bits (37), Expect = 9.3
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -3
Query: 199 VYDTINVRYSYALINT 152
+Y+ + +YS A+INT
Sbjct: 94 LYNNADPQYSSAVINT 109
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 19.0 bits (37), Expect = 9.3
Identities = 6/16 (37%), Positives = 10/16 (62%)
Frame = +1
Query: 121 PMVVLSFEVTRY*SVH 168
PMV ++++ Y VH
Sbjct: 78 PMVDFGYDISNYTDVH 93
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,826
Number of Sequences: 438
Number of extensions: 1481
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used: 4401495
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
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