Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_I03
         (249 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    24   0.33 
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   1.7  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   3.1  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    20   5.3  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    19   7.1  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    19   7.1  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    19   9.3  

>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 23.8 bits (49), Expect = 0.33
 Identities = 9/37 (24%), Positives = 21/37 (56%)
 Frame = -1

Query: 198 EHLRAGQRAALAHVLHRVEPHTVMRLRHGSEYVENFS 88
           ++L     A+L H L + +P T   ++   ++V+N++
Sbjct: 250 KNLNLSLHASLNHTLTKDQPETYELVKEWRDFVDNYA 286


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 1.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 103 VFGPVTEPHYCVRFNSVE 156
           V G +   HYC+R+N+ +
Sbjct: 2   VSGGMAGQHYCLRWNNYQ 19


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 20.6 bits (41), Expect = 3.1
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 40  QPVSPGMHPRAE 5
           Q   PGMHPR +
Sbjct: 215 QQSQPGMHPRQQ 226


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 19.8 bits (39), Expect = 5.3
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 104 TSKTFPRALAPLSKNRMLSRSTAGVS 27
           TSK F RAL+   K  +L  +  G S
Sbjct: 456 TSKLFGRALSRRIKATVLFATETGTS 481



 Score = 19.0 bits (37), Expect = 9.3
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 139 AHSNAAPSRVRIRRKLFLE 83
           AH    P+ +RI  K FL+
Sbjct: 805 AHDRYLPNSLRILLKRFLD 823


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 19.4 bits (38), Expect = 7.1
 Identities = 12/39 (30%), Positives = 16/39 (41%)
 Frame = -3

Query: 121 PSRVRIRRKLFLEPWLRYPRTECCRDPQPVSPGMHPRAE 5
           P   R+RR+  LE      R      P+P  P +   AE
Sbjct: 82  PPHPRLRREAELEAEPGNNRPVYISQPRPPHPRLRREAE 120



 Score = 19.4 bits (38), Expect = 7.1
 Identities = 12/39 (30%), Positives = 16/39 (41%)
 Frame = -3

Query: 121 PSRVRIRRKLFLEPWLRYPRTECCRDPQPVSPGMHPRAE 5
           P   R+RR+  LE      R      P+P  P +   AE
Sbjct: 138 PPHPRLRREAELEAEPGNNRPVYISQPRPPHPRLRREAE 176


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 19.4 bits (38), Expect = 7.1
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 241 LLGRRSWCDR 212
           ++GRRSW  R
Sbjct: 349 IIGRRSWVTR 358


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 19.0 bits (37), Expect = 9.3
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -1

Query: 144 EPHTVMRLRHGSEYVE 97
           EPH + +L+  SE+++
Sbjct: 273 EPHRIPQLQEVSEFLK 288


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,290
Number of Sequences: 438
Number of extensions: 1095
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4401495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)