Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_H23
         (480 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X67309-1|CAA47719.1|  249|Homo sapiens ribosomal protein S6 prot...   128   1e-29
M77232-1|AAA60289.1|  249|Homo sapiens ribosomal protein S6 prot...   128   1e-29
BC094826-1|AAH94826.1|  249|Homo sapiens ribosomal protein S6 pr...   128   1e-29
BC071908-1|AAH71908.1|  249|Homo sapiens ribosomal protein S6 pr...   128   1e-29
BC071907-1|AAH71907.1|  249|Homo sapiens ribosomal protein S6 pr...   128   1e-29
BC009427-1|AAH09427.2|  247|Homo sapiens RPS6 protein protein.        128   1e-29
BC000524-1|AAH00524.1|  249|Homo sapiens ribosomal protein S6 pr...   128   1e-29
AL391834-6|CAM21143.1|  249|Homo sapiens ribosomal protein S6 pr...   128   1e-29
AL391834-5|CAM21142.1|  218|Homo sapiens ribosomal protein S6 pr...   128   1e-29
AB062123-1|BAB93455.1|  249|Homo sapiens ribosomal protein S6 pr...   128   1e-29
BC027620-1|AAH27620.1|  249|Homo sapiens ribosomal protein S6 pr...   126   3e-29
BC013296-1|AAH13296.1|  249|Homo sapiens ribosomal protein S6 pr...   126   3e-29
M20020-1|AAA60288.1|  249|Homo sapiens RPS6 protein.                  125   7e-29
J03537-1|AAA60287.1|  249|Homo sapiens RPS6 protein.                  121   1e-27
AF274945-1|AAK07522.1|   79|Homo sapiens PNAS-20 protein.              48   2e-05

>X67309-1|CAA47719.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score =  128 bits (308), Expect = 1e-29
 Identities = 71/114 (62%), Positives = 82/114 (71%)
 Frame = -3

Query: 478 QEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAP 299
           ++IPGLTD  VPRRLGPKRAS+IRKLFNL KEDDVR+YVV++ L  KEGK   KPR KAP
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAP 174

Query: 298 KIQRLVTPVVLQXXXXXXXXXXXXXXXXKSAEADYAKLLAQRKKESKVRRQEEI 137
           KIQRLVTP VLQ                K   A+YAKLLA+R KE+K +RQE+I
Sbjct: 175 KIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228


>M77232-1|AAA60289.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score =  128 bits (308), Expect = 1e-29
 Identities = 71/114 (62%), Positives = 82/114 (71%)
 Frame = -3

Query: 478 QEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAP 299
           ++IPGLTD  VPRRLGPKRAS+IRKLFNL KEDDVR+YVV++ L  KEGK   KPR KAP
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAP 174

Query: 298 KIQRLVTPVVLQXXXXXXXXXXXXXXXXKSAEADYAKLLAQRKKESKVRRQEEI 137
           KIQRLVTP VLQ                K   A+YAKLLA+R KE+K +RQE+I
Sbjct: 175 KIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228


>BC094826-1|AAH94826.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score =  128 bits (308), Expect = 1e-29
 Identities = 71/114 (62%), Positives = 82/114 (71%)
 Frame = -3

Query: 478 QEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAP 299
           ++IPGLTD  VPRRLGPKRAS+IRKLFNL KEDDVR+YVV++ L  KEGK   KPR KAP
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAP 174

Query: 298 KIQRLVTPVVLQXXXXXXXXXXXXXXXXKSAEADYAKLLAQRKKESKVRRQEEI 137
           KIQRLVTP VLQ                K   A+YAKLLA+R KE+K +RQE+I
Sbjct: 175 KIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228


>BC071908-1|AAH71908.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score =  128 bits (308), Expect = 1e-29
 Identities = 71/114 (62%), Positives = 82/114 (71%)
 Frame = -3

Query: 478 QEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAP 299
           ++IPGLTD  VPRRLGPKRAS+IRKLFNL KEDDVR+YVV++ L  KEGK   KPR KAP
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAP 174

Query: 298 KIQRLVTPVVLQXXXXXXXXXXXXXXXXKSAEADYAKLLAQRKKESKVRRQEEI 137
           KIQRLVTP VLQ                K   A+YAKLLA+R KE+K +RQE+I
Sbjct: 175 KIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228


>BC071907-1|AAH71907.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score =  128 bits (308), Expect = 1e-29
 Identities = 71/114 (62%), Positives = 82/114 (71%)
 Frame = -3

Query: 478 QEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAP 299
           ++IPGLTD  VPRRLGPKRAS+IRKLFNL KEDDVR+YVV++ L  KEGK   KPR KAP
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAP 174

Query: 298 KIQRLVTPVVLQXXXXXXXXXXXXXXXXKSAEADYAKLLAQRKKESKVRRQEEI 137
           KIQRLVTP VLQ                K   A+YAKLLA+R KE+K +RQE+I
Sbjct: 175 KIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228


>BC009427-1|AAH09427.2|  247|Homo sapiens RPS6 protein protein.
          Length = 247

 Score =  128 bits (308), Expect = 1e-29
 Identities = 71/114 (62%), Positives = 82/114 (71%)
 Frame = -3

Query: 478 QEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAP 299
           ++IPGLTD  VPRRLGPKRAS+IRKLFNL KEDDVR+YVV++ L  KEGK   KPR KAP
Sbjct: 117 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAP 172

Query: 298 KIQRLVTPVVLQXXXXXXXXXXXXXXXXKSAEADYAKLLAQRKKESKVRRQEEI 137
           KIQRLVTP VLQ                K   A+YAKLLA+R KE+K +RQE+I
Sbjct: 173 KIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 226


>BC000524-1|AAH00524.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score =  128 bits (308), Expect = 1e-29
 Identities = 71/114 (62%), Positives = 82/114 (71%)
 Frame = -3

Query: 478 QEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAP 299
           ++IPGLTD  VPRRLGPKRAS+IRKLFNL KEDDVR+YVV++ L  KEGK   KPR KAP
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAP 174

Query: 298 KIQRLVTPVVLQXXXXXXXXXXXXXXXXKSAEADYAKLLAQRKKESKVRRQEEI 137
           KIQRLVTP VLQ                K   A+YAKLLA+R KE+K +RQE+I
Sbjct: 175 KIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228


>AL391834-6|CAM21143.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score =  128 bits (308), Expect = 1e-29
 Identities = 71/114 (62%), Positives = 82/114 (71%)
 Frame = -3

Query: 478 QEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAP 299
           ++IPGLTD  VPRRLGPKRAS+IRKLFNL KEDDVR+YVV++ L  KEGK   KPR KAP
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAP 174

Query: 298 KIQRLVTPVVLQXXXXXXXXXXXXXXXXKSAEADYAKLLAQRKKESKVRRQEEI 137
           KIQRLVTP VLQ                K   A+YAKLLA+R KE+K +RQE+I
Sbjct: 175 KIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228


>AL391834-5|CAM21142.1|  218|Homo sapiens ribosomal protein S6
           protein.
          Length = 218

 Score =  128 bits (308), Expect = 1e-29
 Identities = 71/114 (62%), Positives = 82/114 (71%)
 Frame = -3

Query: 478 QEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAP 299
           ++IPGLTD  VPRRLGPKRAS+IRKLFNL KEDDVR+YVV++ L  KEGK   KPR KAP
Sbjct: 88  KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAP 143

Query: 298 KIQRLVTPVVLQXXXXXXXXXXXXXXXXKSAEADYAKLLAQRKKESKVRRQEEI 137
           KIQRLVTP VLQ                K   A+YAKLLA+R KE+K +RQE+I
Sbjct: 144 KIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 197


>AB062123-1|BAB93455.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score =  128 bits (308), Expect = 1e-29
 Identities = 71/114 (62%), Positives = 82/114 (71%)
 Frame = -3

Query: 478 QEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAP 299
           ++IPGLTD  VPRRLGPKRAS+IRKLFNL KEDDVR+YVV++ L  KEGK   KPR KAP
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAP 174

Query: 298 KIQRLVTPVVLQXXXXXXXXXXXXXXXXKSAEADYAKLLAQRKKESKVRRQEEI 137
           KIQRLVTP VLQ                K   A+YAKLLA+R KE+K +RQE+I
Sbjct: 175 KIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228


>BC027620-1|AAH27620.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score =  126 bits (305), Expect = 3e-29
 Identities = 70/114 (61%), Positives = 82/114 (71%)
 Frame = -3

Query: 478 QEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAP 299
           ++IPGLTD  VPRRLGPKRAS+IRKLFNL KEDDVR+YVV++ L  KEGK   KPR KAP
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAP 174

Query: 298 KIQRLVTPVVLQXXXXXXXXXXXXXXXXKSAEADYAKLLAQRKKESKVRRQEEI 137
           KIQRLVTP VLQ                K   A+YAKLLA+R KE++ +RQE+I
Sbjct: 175 KIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAREKRQEQI 228


>BC013296-1|AAH13296.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score =  126 bits (305), Expect = 3e-29
 Identities = 70/114 (61%), Positives = 82/114 (71%)
 Frame = -3

Query: 478 QEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAP 299
           ++IPGLTD  VPRRLGPKRAS+IRKLFNL KEDDVR+YVV++ L  KEGK   KPR +AP
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTRAP 174

Query: 298 KIQRLVTPVVLQXXXXXXXXXXXXXXXXKSAEADYAKLLAQRKKESKVRRQEEI 137
           KIQRLVTP VLQ                K   A+YAKLLA+R KE+K +RQE+I
Sbjct: 175 KIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228


>M20020-1|AAA60288.1|  249|Homo sapiens RPS6 protein.
          Length = 249

 Score =  125 bits (302), Expect = 7e-29
 Identities = 70/114 (61%), Positives = 81/114 (71%)
 Frame = -3

Query: 478 QEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAP 299
           ++IPGLTD  VPRRLGPKRAS+IRK FNL KEDDVR+YVV++ L  KEGK   KPR KAP
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKRFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAP 174

Query: 298 KIQRLVTPVVLQXXXXXXXXXXXXXXXXKSAEADYAKLLAQRKKESKVRRQEEI 137
           KIQRLVTP VLQ                K   A+YAKLLA+R KE+K +RQE+I
Sbjct: 175 KIQRLVTPRVLQHKRRRIALKQQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228


>J03537-1|AAA60287.1|  249|Homo sapiens RPS6 protein.
          Length = 249

 Score =  121 bits (292), Expect = 1e-27
 Identities = 68/114 (59%), Positives = 80/114 (70%)
 Frame = -3

Query: 478 QEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAP 299
           ++IPGLTD  VPRRLGPKRAS+IRKLFNL KEDDVR  VV++ L  KEGK   +PR KAP
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRECVVRKPL-NKEGK---RPRTKAP 174

Query: 298 KIQRLVTPVVLQXXXXXXXXXXXXXXXXKSAEADYAKLLAQRKKESKVRRQEEI 137
           KIQRLVTP VLQ                K   A+YAKLLA+R K++K +RQE+I
Sbjct: 175 KIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKQAKEKRQEQI 228


>AF274945-1|AAK07522.1|   79|Homo sapiens PNAS-20 protein.
          Length = 79

 Score = 48.0 bits (109), Expect = 2e-05
 Identities = 21/27 (77%), Positives = 24/27 (88%)
 Frame = -3

Query: 478 QEIPGLTDGEVPRRLGPKRASKIRKLF 398
           ++IPGLTD  VPRRLGPK AS+IRKLF
Sbjct: 48  KDIPGLTDTTVPRRLGPKEASRIRKLF 74


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,288,799
Number of Sequences: 237096
Number of extensions: 885618
Number of successful extensions: 1702
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1674
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4270724850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)