Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_H23
(480 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal prot... 135 3e-32
L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal prot... 135 3e-32
L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal prot... 135 3e-32
L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal prot... 135 3e-32
AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p pro... 135 3e-32
AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-P... 135 3e-32
AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-P... 135 3e-32
AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-P... 135 3e-32
L02074-3|AAB05984.1| 200|Drosophila melanogaster protein ( Dros... 32 5e-04
L02074-2|AAB05983.1| 200|Drosophila melanogaster protein ( Dros... 32 5e-04
BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p pro... 32 5e-04
BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p pro... 32 5e-04
AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-P... 32 6e-04
AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-P... 32 6e-04
AY075483-1|AAL68293.1| 313|Drosophila melanogaster RE39480p pro... 29 3.3
AE013599-905|AAF58912.1| 313|Drosophila melanogaster CG12926-PA... 29 3.3
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 28 7.6
>L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 135 bits (327), Expect = 3e-32
Identities = 71/112 (63%), Positives = 81/112 (72%)
Frame = -3
Query: 478 QEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAP 299
++IPGLTD +PRRLGPKRASKIRKL+NL KEDDVRR+VV+R LPA K+N K KAP
Sbjct: 119 KDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPA---KDNKKATSKAP 175
Query: 298 KIQRLVTPVVLQXXXXXXXXXXXXXXXXKSAEADYAKLLAQRKKESKVRRQE 143
KIQRL+TPVVLQ K A ADYAKLL QRKKESK +R+E
Sbjct: 176 KIQRLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE 227
>L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 135 bits (327), Expect = 3e-32
Identities = 71/112 (63%), Positives = 81/112 (72%)
Frame = -3
Query: 478 QEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAP 299
++IPGLTD +PRRLGPKRASKIRKL+NL KEDDVRR+VV+R LPA K+N K KAP
Sbjct: 119 KDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPA---KDNKKATSKAP 175
Query: 298 KIQRLVTPVVLQXXXXXXXXXXXXXXXXKSAEADYAKLLAQRKKESKVRRQE 143
KIQRL+TPVVLQ K A ADYAKLL QRKKESK +R+E
Sbjct: 176 KIQRLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE 227
>L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 135 bits (327), Expect = 3e-32
Identities = 71/112 (63%), Positives = 81/112 (72%)
Frame = -3
Query: 478 QEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAP 299
++IPGLTD +PRRLGPKRASKIRKL+NL KEDDVRR+VV+R LPA K+N K KAP
Sbjct: 119 KDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPA---KDNKKATSKAP 175
Query: 298 KIQRLVTPVVLQXXXXXXXXXXXXXXXXKSAEADYAKLLAQRKKESKVRRQE 143
KIQRL+TPVVLQ K A ADYAKLL QRKKESK +R+E
Sbjct: 176 KIQRLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE 227
>L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 135 bits (327), Expect = 3e-32
Identities = 71/112 (63%), Positives = 81/112 (72%)
Frame = -3
Query: 478 QEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAP 299
++IPGLTD +PRRLGPKRASKIRKL+NL KEDDVRR+VV+R LPA K+N K KAP
Sbjct: 119 KDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPA---KDNKKATSKAP 175
Query: 298 KIQRLVTPVVLQXXXXXXXXXXXXXXXXKSAEADYAKLLAQRKKESKVRRQE 143
KIQRL+TPVVLQ K A ADYAKLL QRKKESK +R+E
Sbjct: 176 KIQRLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE 227
>AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p
protein.
Length = 217
Score = 135 bits (327), Expect = 3e-32
Identities = 71/112 (63%), Positives = 81/112 (72%)
Frame = -3
Query: 478 QEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAP 299
++IPGLTD +PRRLGPKRASKIRKL+NL KEDDVRR+VV+R LPA K+N K KAP
Sbjct: 88 KDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPA---KDNKKATSKAP 144
Query: 298 KIQRLVTPVVLQXXXXXXXXXXXXXXXXKSAEADYAKLLAQRKKESKVRRQE 143
KIQRL+TPVVLQ K A ADYAKLL QRKKESK +R+E
Sbjct: 145 KIQRLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE 196
>AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-PA,
isoform A protein.
Length = 217
Score = 135 bits (327), Expect = 3e-32
Identities = 71/112 (63%), Positives = 81/112 (72%)
Frame = -3
Query: 478 QEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAP 299
++IPGLTD +PRRLGPKRASKIRKL+NL KEDDVRR+VV+R LPA K+N K KAP
Sbjct: 88 KDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPA---KDNKKATSKAP 144
Query: 298 KIQRLVTPVVLQXXXXXXXXXXXXXXXXKSAEADYAKLLAQRKKESKVRRQE 143
KIQRL+TPVVLQ K A ADYAKLL QRKKESK +R+E
Sbjct: 145 KIQRLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE 196
>AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-PC,
isoform C protein.
Length = 251
Score = 135 bits (327), Expect = 3e-32
Identities = 71/112 (63%), Positives = 81/112 (72%)
Frame = -3
Query: 478 QEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAP 299
++IPGLTD +PRRLGPKRASKIRKL+NL KEDDVRR+VV+R LPA K+N K KAP
Sbjct: 122 KDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPA---KDNKKATSKAP 178
Query: 298 KIQRLVTPVVLQXXXXXXXXXXXXXXXXKSAEADYAKLLAQRKKESKVRRQE 143
KIQRL+TPVVLQ K A ADYAKLL QRKKESK +R+E
Sbjct: 179 KIQRLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE 230
>AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-PB,
isoform B protein.
Length = 248
Score = 135 bits (327), Expect = 3e-32
Identities = 71/112 (63%), Positives = 81/112 (72%)
Frame = -3
Query: 478 QEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAP 299
++IPGLTD +PRRLGPKRASKIRKL+NL KEDDVRR+VV+R LPA K+N K KAP
Sbjct: 119 KDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPA---KDNKKATSKAP 175
Query: 298 KIQRLVTPVVLQXXXXXXXXXXXXXXXXKSAEADYAKLLAQRKKESKVRRQE 143
KIQRL+TPVVLQ K A ADYAKLL QRKKESK +R+E
Sbjct: 176 KIQRLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE 227
>L02074-3|AAB05984.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 31.9 bits (69), Expect(2) = 5e-04
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = -3
Query: 445 PRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAPK 296
P RLGP R+S I K++ L +EDD ++P K + + K R A K
Sbjct: 119 PCRLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 161
Score = 29.1 bits (62), Expect(2) = 5e-04
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 208 AEADYAKLLAQRKKESKVRR 149
A A+Y KLL +RKKESK R
Sbjct: 163 AIAEYVKLLVKRKKESKANR 182
>L02074-2|AAB05983.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 31.9 bits (69), Expect(2) = 5e-04
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = -3
Query: 445 PRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAPK 296
P RLGP R+S I K++ L +EDD ++P K + + K R A K
Sbjct: 119 PCRLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 161
Score = 29.1 bits (62), Expect(2) = 5e-04
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 208 AEADYAKLLAQRKKESKVRR 149
A A+Y KLL +RKKESK R
Sbjct: 163 AIAEYVKLLVKRKKESKANR 182
>BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p
protein.
Length = 149
Score = 31.9 bits (69), Expect(2) = 5e-04
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = -3
Query: 445 PRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAPK 296
P RLGP R+S I K++ L +EDD ++P K + + K R A K
Sbjct: 68 PCRLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 110
Score = 29.1 bits (62), Expect(2) = 5e-04
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 208 AEADYAKLLAQRKKESKVRR 149
A A+Y KLL +RKKESK R
Sbjct: 112 AIAEYVKLLVKRKKESKANR 131
>BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p
protein.
Length = 147
Score = 31.9 bits (69), Expect(2) = 5e-04
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = -3
Query: 445 PRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAPK 296
P RLGP R+S I K++ L +EDD ++P K + + K R A K
Sbjct: 66 PCRLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 108
Score = 29.1 bits (62), Expect(2) = 5e-04
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 208 AEADYAKLLAQRKKESKVRR 149
A A+Y KLL +RKKESK R
Sbjct: 110 AIAEYVKLLVKRKKESKANR 129
>AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-PA
protein.
Length = 135
Score = 31.9 bits (69), Expect(2) = 6e-04
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = -3
Query: 445 PRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAPK 296
P RLGP R+S I K++ L +EDD ++P K + + K R A K
Sbjct: 54 PCRLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 96
Score = 29.1 bits (62), Expect(2) = 6e-04
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 208 AEADYAKLLAQRKKESKVRR 149
A A+Y KLL +RKKESK R
Sbjct: 98 AIAEYVKLLVKRKKESKANR 117
>AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-PA
protein.
Length = 135
Score = 31.9 bits (69), Expect(2) = 6e-04
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = -3
Query: 445 PRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAPK 296
P RLGP R+S I K++ L +EDD ++P K + + K R A K
Sbjct: 54 PCRLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 96
Score = 29.1 bits (62), Expect(2) = 6e-04
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 208 AEADYAKLLAQRKKESKVRR 149
A A+Y KLL +RKKESK R
Sbjct: 98 AIAEYVKLLVKRKKESKANR 117
>AY075483-1|AAL68293.1| 313|Drosophila melanogaster RE39480p
protein.
Length = 313
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -3
Query: 421 ASKIRKLFNL-KKEDDVRRYVVKRLLPAKEGKEN 323
+ KIRK F++ K D + +YV K LPA+ G N
Sbjct: 223 SEKIRKRFHIHSKLDSLYKYVPKECLPAEYGGSN 256
>AE013599-905|AAF58912.1| 313|Drosophila melanogaster CG12926-PA
protein.
Length = 313
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -3
Query: 421 ASKIRKLFNL-KKEDDVRRYVVKRLLPAKEGKEN 323
+ KIRK F++ K D + +YV K LPA+ G N
Sbjct: 223 SEKIRKRFHIHSKLDSLYKYVPKECLPAEYGGSN 256
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = -2
Query: 386 RRRCASLCCKTPFTCQRGQGKCKTQIQGA*NPE 288
+ RC + C TC R GKC + NP+
Sbjct: 1312 KERCEGVVCGIGATCDRNNGKCICEPNFVGNPD 1344
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,623,247
Number of Sequences: 53049
Number of extensions: 265363
Number of successful extensions: 791
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1663799760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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