Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_H22
         (291 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    25   0.14 
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          24   0.44 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      24   0.44 
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   1.3  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   1.3  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   2.3  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    20   7.1  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    19   9.4  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    19   9.4  

>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 25.4 bits (53), Expect = 0.14
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 269 WNREESLQKGECSVVVQNIAGYQLNRGTK 183
           WN  +SLQ+    +V QN    Q+  G K
Sbjct: 328 WNEHQSLQRQNLEMVAQNDRTLQMIAGMK 356


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 0.44
 Identities = 15/60 (25%), Positives = 29/60 (48%)
 Frame = -2

Query: 242 GECSVVVQNIAGYQLNRGTKFSCCSTLMQCRHCFTR*ASLNP*LVYFRIYKRVITNEYVY 63
           G    + + I GY L   +K+    + ++    F+  +  +P   ++RIYKR+I   + Y
Sbjct: 379 GSIDTLARKILGYNLEAASKYQIVPSALEI---FST-SMKDP--AFYRIYKRIIDYYHSY 432


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 0.44
 Identities = 15/60 (25%), Positives = 29/60 (48%)
 Frame = -2

Query: 242 GECSVVVQNIAGYQLNRGTKFSCCSTLMQCRHCFTR*ASLNP*LVYFRIYKRVITNEYVY 63
           G    + + I GY L   +K+    + ++    F+  +  +P   ++RIYKR+I   + Y
Sbjct: 379 GSIDTLARKILGYNLEAASKYQIVPSALEI---FST-SMKDP--AFYRIYKRIIDYYHSY 432


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 1.3
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 211 AMFWTTTEHSPFWRDSSRFH 270
           A ++   E  P+W  SS++H
Sbjct: 232 AYYYYMREMLPYWMSSSQYH 251


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 1.3
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 211 AMFWTTTEHSPFWRDSSRFH 270
           A ++   E  P+W  SS++H
Sbjct: 232 AYYYYMREMLPYWMSSSQYH 251


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 2.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 109 TSYGLRDAHLVKQCLHC 159
           T Y +RD   V QC+ C
Sbjct: 613 TQYQIRDHKDVTQCISC 629


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 200 VDSQRCFGPLQNI 238
           VDS  C G L+NI
Sbjct: 196 VDSVECCGALKNI 208


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 274 FDGTVRSLSKRAN 236
           FD  ++ LSK+AN
Sbjct: 184 FDDIIQRLSKKAN 196


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 274 FDGTVRSLSKRAN 236
           FD  ++ LSK+AN
Sbjct: 274 FDDIIQRLSKKAN 286


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,782
Number of Sequences: 438
Number of extensions: 1517
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5869407
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)