BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_H21
(278 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 23 2.9
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein. 21 8.7
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 22.6 bits (46), Expect = 2.9
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3
Query: 228 CFLNKKSNRRTLDVCH 275
C SNR++ DVCH
Sbjct: 78 CVQTGYSNRKSCDVCH 93
>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
Length = 1459
Score = 21.0 bits (42), Expect = 8.7
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 186 SRL*THLSWHLYERCFLNKKSNRRTLD 266
S + THL W R L + +NR LD
Sbjct: 600 SHIPTHLQWLDLHRNELTELTNRYGLD 626
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 262,847
Number of Sequences: 2352
Number of extensions: 4391
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 16604898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -