Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_H20
(319 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0348 - 2607315-2607424,2608634-2609030 202 5e-53
06_01_0428 + 3055163-3055573 202 5e-53
06_01_0427 - 3054204-3054614 202 5e-53
06_01_0423 - 3039527-3039937 202 5e-53
05_04_0449 - 21355439-21355849 202 5e-53
04_03_0909 + 20748653-20749063 202 5e-53
01_06_1456 + 37507156-37507566 202 5e-53
06_01_0217 - 1644696-1645034,1645143-1645214 201 1e-52
06_01_0425 - 3045557-3046004,3046852-3046856 197 1e-51
03_03_0212 + 15479850-15479921,15479965-15480083,15480175-154802... 196 3e-51
02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596 179 5e-46
12_02_0048 - 12852335-12852745 170 2e-43
02_03_0107 - 15303890-15304060,15304158-15304248,15304505-153046... 164 1e-41
12_02_0047 - 12836779-12837189 162 5e-41
05_05_0297 - 23921648-23921758,23922011-23922089,23922774-239228... 116 5e-27
04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392 85 2e-17
03_01_0575 + 4247431-4247489,4248475-4248547,4248792-4249229,425... 29 0.79
04_02_0033 - 8997041-8997754 28 1.4
03_06_0307 + 33027012-33027167,33028505-33028615,33028927-330290... 28 1.4
08_02_0850 + 21862110-21862394,21862555-21862723,21862901-218629... 27 4.2
04_04_1478 - 33882625-33883639,33883725-33883849,33883935-338841... 26 5.6
01_06_1753 - 39664219-39665445 26 5.6
11_04_0097 + 13448740-13450725 26 7.4
03_05_0267 - 22538631-22539452 26 7.4
01_01_1163 + 9258427-9258451,9258581-9258681,9258890-9258967,925... 26 7.4
12_02_0494 + 19689245-19689414,19689605-19689894,19690665-19690747 25 9.7
04_04_1453 + 33710202-33710516 25 9.7
03_05_0495 - 24907659-24908747 25 9.7
03_05_0336 - 23265283-23265462,23266023-23266118,23266571-23267020 25 9.7
01_06_0206 + 27526171-27526815 25 9.7
01_02_0110 + 11210174-11210292,11211635-11211752,11212426-112125... 25 9.7
>11_01_0348 - 2607315-2607424,2608634-2609030
Length = 168
Score = 202 bits (493), Expect = 5e-53
Identities = 96/103 (93%), Positives = 102/103 (99%)
Frame = +1
Query: 10 ATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKT 189
ATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKT
Sbjct: 22 ATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKT 81
Query: 190 DLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKD 318
DLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKD
Sbjct: 82 DLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKD 124
>06_01_0428 + 3055163-3055573
Length = 136
Score = 202 bits (493), Expect = 5e-53
Identities = 96/103 (93%), Positives = 102/103 (99%)
Frame = +1
Query: 10 ATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKT 189
ATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKT
Sbjct: 22 ATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKT 81
Query: 190 DLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKD 318
DLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKD
Sbjct: 82 DLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKD 124
>06_01_0427 - 3054204-3054614
Length = 136
Score = 202 bits (493), Expect = 5e-53
Identities = 96/103 (93%), Positives = 102/103 (99%)
Frame = +1
Query: 10 ATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKT 189
ATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKT
Sbjct: 22 ATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKT 81
Query: 190 DLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKD 318
DLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKD
Sbjct: 82 DLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKD 124
>06_01_0423 - 3039527-3039937
Length = 136
Score = 202 bits (493), Expect = 5e-53
Identities = 96/103 (93%), Positives = 102/103 (99%)
Frame = +1
Query: 10 ATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKT 189
ATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKT
Sbjct: 22 ATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKT 81
Query: 190 DLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKD 318
DLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKD
Sbjct: 82 DLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKD 124
>05_04_0449 - 21355439-21355849
Length = 136
Score = 202 bits (493), Expect = 5e-53
Identities = 96/103 (93%), Positives = 102/103 (99%)
Frame = +1
Query: 10 ATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKT 189
ATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKT
Sbjct: 22 ATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKT 81
Query: 190 DLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKD 318
DLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKD
Sbjct: 82 DLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKD 124
>04_03_0909 + 20748653-20749063
Length = 136
Score = 202 bits (493), Expect = 5e-53
Identities = 96/103 (93%), Positives = 102/103 (99%)
Frame = +1
Query: 10 ATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKT 189
ATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKT
Sbjct: 22 ATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKT 81
Query: 190 DLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKD 318
DLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKD
Sbjct: 82 DLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKD 124
>01_06_1456 + 37507156-37507566
Length = 136
Score = 202 bits (493), Expect = 5e-53
Identities = 96/103 (93%), Positives = 102/103 (99%)
Frame = +1
Query: 10 ATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKT 189
ATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKT
Sbjct: 22 ATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKT 81
Query: 190 DLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKD 318
DLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKD
Sbjct: 82 DLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKD 124
>06_01_0217 - 1644696-1645034,1645143-1645214
Length = 136
Score = 201 bits (490), Expect = 1e-52
Identities = 97/103 (94%), Positives = 101/103 (98%)
Frame = +1
Query: 10 ATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKT 189
ATKAARKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKT
Sbjct: 22 ATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKT 81
Query: 190 DLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKD 318
DLRFQS A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKD
Sbjct: 82 DLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKD 124
>06_01_0425 - 3045557-3046004,3046852-3046856
Length = 150
Score = 197 bits (481), Expect = 1e-51
Identities = 94/103 (91%), Positives = 100/103 (97%)
Frame = +1
Query: 10 ATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKT 189
ATKA KSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKT
Sbjct: 36 ATKATCKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKT 95
Query: 190 DLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKD 318
DLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKD
Sbjct: 96 DLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKD 138
>03_03_0212 +
15479850-15479921,15479965-15480083,15480175-15480265,
15480363-15480533
Length = 150
Score = 196 bits (478), Expect = 3e-51
Identities = 94/103 (91%), Positives = 100/103 (97%)
Frame = +1
Query: 10 ATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKT 189
+ +AARKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKT
Sbjct: 36 SVQAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKT 95
Query: 190 DLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKD 318
DLRFQS A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKD
Sbjct: 96 DLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKD 138
>02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596
Length = 115
Score = 179 bits (435), Expect = 5e-46
Identities = 87/100 (87%), Positives = 93/100 (93%)
Frame = +1
Query: 19 AARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 198
AARKSAP GGVKKPHRYRPGTVALREIR+YQK+TELLIRKLPFQRLVREIAQ FK D+R
Sbjct: 4 AARKSAPCIGGVKKPHRYRPGTVALREIRKYQKNTELLIRKLPFQRLVREIAQLFKHDMR 63
Query: 199 FQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKD 318
FQS A+ ALQEA+EAYLVGLFEDTNLCAIH+KRVTIM KD
Sbjct: 64 FQSHAVLALQEAAEAYLVGLFEDTNLCAIHSKRVTIMSKD 103
>12_02_0048 - 12852335-12852745
Length = 136
Score = 170 bits (414), Expect = 2e-43
Identities = 80/101 (79%), Positives = 92/101 (91%)
Frame = +1
Query: 16 KAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDL 195
K ARKSAP+ G+KKPHR++PGTVALREIR YQKSTELLIRKLPFQRLV+EIAQD ++ +
Sbjct: 24 KVARKSAPTMAGLKKPHRFKPGTVALREIRTYQKSTELLIRKLPFQRLVQEIAQDVRSYV 83
Query: 196 RFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKD 318
RFQS+A+ ALQEA+E YLVGLF+DTNLC IHAKRVTIMPKD
Sbjct: 84 RFQSSAVVALQEAAETYLVGLFKDTNLCVIHAKRVTIMPKD 124
>02_03_0107 -
15303890-15304060,15304158-15304248,15304505-15304614,
15304715-15304784,15306365-15306558
Length = 211
Score = 164 bits (399), Expect = 1e-41
Identities = 82/99 (82%), Positives = 89/99 (89%)
Frame = +1
Query: 22 ARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRF 201
ARKS P G VKKP R+RPGTVALREIR+YQK+TELLIRKLPFQRLVREIAQ FK D+RF
Sbjct: 102 ARKSVPFIG-VKKPRRHRPGTVALREIRKYQKNTELLIRKLPFQRLVREIAQHFKHDMRF 160
Query: 202 QSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKD 318
QS A+ ALQEA+EAYLVGLFEDTNLCAIH+KRVTIM KD
Sbjct: 161 QSHAVLALQEAAEAYLVGLFEDTNLCAIHSKRVTIMSKD 199
>12_02_0047 - 12836779-12837189
Length = 136
Score = 162 bits (394), Expect = 5e-41
Identities = 77/101 (76%), Positives = 86/101 (85%)
Frame = +1
Query: 16 KAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDL 195
K ARKSAP G+KKPHR+ P VALREIR YQKSTELLIRKLPFQRLV+EI QD ++ +
Sbjct: 24 KVARKSAPMMAGLKKPHRFNPWIVALREIRTYQKSTELLIRKLPFQRLVQEITQDIRSYV 83
Query: 196 RFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKD 318
RFQS+A+ LQEA+E YLVGLFEDTNLC IHAKRVTIMPKD
Sbjct: 84 RFQSSAMAVLQEAAETYLVGLFEDTNLCVIHAKRVTIMPKD 124
>05_05_0297 -
23921648-23921758,23922011-23922089,23922774-23922822,
23923180-23923255,23923693-23923767,23923862-23923992,
23924830-23924935
Length = 208
Score = 116 bits (278), Expect = 5e-27
Identities = 58/89 (65%), Positives = 71/89 (79%), Gaps = 1/89 (1%)
Frame = +1
Query: 55 KKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDL-RFQSAAIGALQE 231
+KPHR+RPGTVALREIR++QK+TELLI PF RLVREI + D+ R+ A+ ALQE
Sbjct: 45 RKPHRFRPGTVALREIRKFQKTTELLIPFAPFSRLVREITDFYSKDVSRWTLEALLALQE 104
Query: 232 ASEAYLVGLFEDTNLCAIHAKRVTIMPKD 318
A+E +LV +FE +NLCAIHAKRVTIM KD
Sbjct: 105 AAEYHLVDIFEVSNLCAIHAKRVTIMQKD 133
>04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392
Length = 106
Score = 84.6 bits (200), Expect = 2e-17
Identities = 40/44 (90%), Positives = 42/44 (95%)
Frame = +1
Query: 187 TDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKD 318
TDLRFQS A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKD
Sbjct: 51 TDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKD 94
Score = 49.6 bits (113), Expect = 5e-07
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = +1
Query: 10 ATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRK 141
ATKAARKSAP+TGGVKKPHRY P R+Q L +++
Sbjct: 22 ATKAARKSAPTTGGVKKPHRYPPWKRCSSTDLRFQSHAVLALQE 65
>03_01_0575 +
4247431-4247489,4248475-4248547,4248792-4249229,
4252122-4253339
Length = 595
Score = 29.1 bits (62), Expect = 0.79
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 73 RPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLV 252
RP V L + Y+ + EL + K F L R+ + + L FQS + E+Y+
Sbjct: 171 RPRPVYLIDFACYKPADELKVSKAEFIDLARKSGKFDEDSLAFQSRLLAKSGIGDESYMP 230
Query: 253 G-LFEDTNLCA 282
+FE CA
Sbjct: 231 RCVFEPGTNCA 241
>04_02_0033 - 8997041-8997754
Length = 237
Score = 28.3 bits (60), Expect = 1.4
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 266 TPTFAPSTPNA*PLCLK 316
TPT PSTPN P C++
Sbjct: 156 TPTATPSTPNGDPFCIR 172
>03_06_0307 +
33027012-33027167,33028505-33028615,33028927-33029065,
33029215-33029323,33029422-33029425
Length = 172
Score = 28.3 bits (60), Expect = 1.4
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Frame = +1
Query: 1 ARGATKAARK----SAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRK-LPFQRLVR 165
A G A R+ SA S G + R R ++ +STE L+RK +R++R
Sbjct: 2 AHGRAAAVRRPKSSSASSAGAAAERKRKRAAAAKTVSLKNQIRSTERLLRKRRKIERMIR 61
Query: 166 EIAQDFKTDLRFQSAAIGALQEASE 240
+ + +++ S + L+E E
Sbjct: 62 RLEKQQRSNADDASNKLSKLKEDLE 86
>08_02_0850 +
21862110-21862394,21862555-21862723,21862901-21862965,
21863632-21863905,21863998-21864145,21864237-21864346,
21864440-21864495,21864568-21864624,21864733-21864876,
21865304-21865351
Length = 451
Score = 26.6 bits (56), Expect = 4.2
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 176 KTLKPIFVSSLLPLALCKRPVKPIWWVCLKTPTFAPSTP 292
K LK +FV SL P+ P+W + + APS P
Sbjct: 190 KALKELFVPSLRDYVKTFYPLGPVWQPPGSSTSKAPSAP 228
>04_04_1478 -
33882625-33883639,33883725-33883849,33883935-33884144,
33884645-33884650
Length = 451
Score = 26.2 bits (55), Expect = 5.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -2
Query: 279 AKVGVFKQTHQIGFTGLLQSANGSRLETKIGFKVLSN 169
A V QT Q G + NGS ++ ++ FK+LS+
Sbjct: 195 ATVTAIMQTIQSNQNGSMADQNGSTIDQELLFKILSD 231
>01_06_1753 - 39664219-39665445
Length = 408
Score = 26.2 bits (55), Expect = 5.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 1 ARGATKAARKSAPSTGGVKKPHRYR 75
A G AAR + GGVKK + YR
Sbjct: 145 AGGGYAAARHNGAGAGGVKKQYSYR 169
>11_04_0097 + 13448740-13450725
Length = 661
Score = 25.8 bits (54), Expect = 7.4
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +2
Query: 185 KPIFVSSLLPLALCKRPVKPIWWVCLKTPTFAPSTPNA 298
KP+ +S LLPL L RP + + TPT AP+ +A
Sbjct: 5 KPL-LSRLLPLPLPLRPHLRLLCLATATPTPAPTPADA 41
>03_05_0267 - 22538631-22539452
Length = 273
Score = 25.8 bits (54), Expect = 7.4
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +2
Query: 233 PVKPIWWVCLKTPTFAPSTPNA*P 304
P +P WW C +P+ P++P+ P
Sbjct: 175 PARPRWWPC--SPSSPPASPSPSP 196
>01_01_1163 +
9258427-9258451,9258581-9258681,9258890-9258967,
9259625-9259765,9260263-9260329,9261039-9261193,
9261285-9261386,9262022-9262141,9262688-9262855
Length = 318
Score = 25.8 bits (54), Expect = 7.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 22 ARKSAPSTGGVKKPHRYRPGTVALREIRRYQKS 120
AR APS+GG +P R G ++ R R Q +
Sbjct: 233 ARIFAPSSGGSSRPSRSLVGNMSSRTSRAVQNN 265
>12_02_0494 + 19689245-19689414,19689605-19689894,19690665-19690747
Length = 180
Score = 25.4 bits (53), Expect = 9.7
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 304 WLRVWRGWRKGWC 266
WL V GW GWC
Sbjct: 80 WLIVMPGWFSGWC 92
>04_04_1453 + 33710202-33710516
Length = 104
Score = 25.4 bits (53), Expect = 9.7
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +1
Query: 67 RYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQ 228
+Y GTV L RR L + +L RLV E+ + + L +AA G Q
Sbjct: 29 QYCGGTVWLGRRRRPAGRCRLAVSRLVRWRLVAELLRPIRKALMEMAAAAGRRQ 82
>03_05_0495 - 24907659-24908747
Length = 362
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 61 PHRYRPGTVALREIRRYQKS 120
PH YRPG V+ I+ +KS
Sbjct: 312 PHTYRPGEVSASLIKELRKS 331
>03_05_0336 - 23265283-23265462,23266023-23266118,23266571-23267020
Length = 241
Score = 25.4 bits (53), Expect = 9.7
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +1
Query: 22 ARKSAPSTGGVKKPHRYRPGTVALREIRRY 111
AR P GGV P RPG V +RR+
Sbjct: 130 ARGGLPPVGGVLLPLSARPGGVESELLRRW 159
>01_06_0206 + 27526171-27526815
Length = 214
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -1
Query: 298 RVWRGWRKGWCLQTDPPDRLH 236
R+W G KGW + TD LH
Sbjct: 52 RMWIGSAKGWLVTTDDKCGLH 72
>01_02_0110 +
11210174-11210292,11211635-11211752,11212426-11212522,
11212991-11213080,11213174-11213280,11213765-11213887,
11214055-11214208,11214582-11214642,11214748-11215103,
11216535-11218056,11218169-11218415
Length = 997
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 164 EKLLKTLKPIFVSSLLPLALCKRPVKPIWWVCL 262
+KL+ L LLP P+ P W VCL
Sbjct: 177 KKLMWKLNKSIAKELLPTQPVDFPIDPWWGVCL 209
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,329,063
Number of Sequences: 37544
Number of extensions: 172311
Number of successful extensions: 582
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 580
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 398975940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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