Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_H14
(352 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M81757-1|AAA89070.1| 145|Homo sapiens S19 ribosomal protein pro... 124 6e-29
BC018616-1|AAH18616.1| 145|Homo sapiens ribosomal protein S19 p... 124 6e-29
BC007615-1|AAH07615.1| 145|Homo sapiens ribosomal protein S19 p... 124 6e-29
BC000023-1|AAH00023.1| 145|Homo sapiens ribosomal protein S19 p... 124 6e-29
AF092907-1|AAD13668.1| 145|Homo sapiens ribosomal protein S19 p... 124 6e-29
BC017386-1|AAH17386.1| 157|Homo sapiens ribosomal protein S19 p... 123 1e-28
BC150265-1|AAI50266.1| 1481|Homo sapiens CRKRS protein protein. 29 3.1
AF227198-1|AAF36401.1| 1490|Homo sapiens CrkRS protein. 29 3.1
AB020711-1|BAA74927.2| 1535|Homo sapiens KIAA0904 protein protein. 29 3.1
DQ231553-1|ABB70145.1| 124|Homo sapiens immunoglobulin heavy ch... 29 4.1
BC051309-1|AAH51309.1| 149|Homo sapiens zinc finger protein 69 ... 29 5.5
BC063800-1|AAH63800.1| 1000|Homo sapiens SEC23 interacting prote... 28 9.5
AB019435-1|BAA77392.1| 1000|Homo sapiens phospholipase protein. 28 9.5
>M81757-1|AAA89070.1| 145|Homo sapiens S19 ribosomal protein
protein.
Length = 145
Score = 124 bits (300), Expect = 6e-29
Identities = 56/96 (58%), Positives = 72/96 (75%)
Frame = +1
Query: 64 MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 243
M VTVKDV Q + V+ +AA LKK GK+KVP+ +D VK A+ KELAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 244 LRHIYIRSPVGVKTVTRIFGGRKRNGVTPSHFWRSS 351
RH+Y+R GV ++T+I+GGR+RNGV PSHF R S
Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGS 96
>BC018616-1|AAH18616.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 124 bits (300), Expect = 6e-29
Identities = 56/96 (58%), Positives = 72/96 (75%)
Frame = +1
Query: 64 MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 243
M VTVKDV Q + V+ +AA LKK GK+KVP+ +D VK A+ KELAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 244 LRHIYIRSPVGVKTVTRIFGGRKRNGVTPSHFWRSS 351
RH+Y+R GV ++T+I+GGR+RNGV PSHF R S
Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGS 96
>BC007615-1|AAH07615.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 124 bits (300), Expect = 6e-29
Identities = 56/96 (58%), Positives = 72/96 (75%)
Frame = +1
Query: 64 MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 243
M VTVKDV Q + V+ +AA LKK GK+KVP+ +D VK A+ KELAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 244 LRHIYIRSPVGVKTVTRIFGGRKRNGVTPSHFWRSS 351
RH+Y+R GV ++T+I+GGR+RNGV PSHF R S
Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGS 96
>BC000023-1|AAH00023.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 124 bits (300), Expect = 6e-29
Identities = 56/96 (58%), Positives = 72/96 (75%)
Frame = +1
Query: 64 MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 243
M VTVKDV Q + V+ +AA LKK GK+KVP+ +D VK A+ KELAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 244 LRHIYIRSPVGVKTVTRIFGGRKRNGVTPSHFWRSS 351
RH+Y+R GV ++T+I+GGR+RNGV PSHF R S
Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGS 96
>AF092907-1|AAD13668.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 124 bits (300), Expect = 6e-29
Identities = 56/96 (58%), Positives = 72/96 (75%)
Frame = +1
Query: 64 MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 243
M VTVKDV Q + V+ +AA LKK GK+KVP+ +D VK A+ KELAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 244 LRHIYIRSPVGVKTVTRIFGGRKRNGVTPSHFWRSS 351
RH+Y+R GV ++T+I+GGR+RNGV PSHF R S
Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGS 96
>BC017386-1|AAH17386.1| 157|Homo sapiens ribosomal protein S19
protein.
Length = 157
Score = 123 bits (297), Expect = 1e-28
Identities = 55/93 (59%), Positives = 71/93 (76%)
Frame = +1
Query: 73 VTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAILRH 252
VTVKDV Q + V+ +AA LKK GK+KVP+ +D VK A+ KELAPYD +WFY R A+ RH
Sbjct: 16 VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARH 75
Query: 253 IYIRSPVGVKTVTRIFGGRKRNGVTPSHFWRSS 351
+Y+R GV ++T+I+GGR+RNGV PSHF R S
Sbjct: 76 LYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGS 108
>BC150265-1|AAI50266.1| 1481|Homo sapiens CRKRS protein protein.
Length = 1481
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +3
Query: 120 RSLEKDRQSEGSRSYGLGKDSSFQGTGS 203
++L K+R GS S+ LG+ SS+QGTGS
Sbjct: 1359 QTLVKNRTFSGSLSH-LGESSSYQGTGS 1385
>AF227198-1|AAF36401.1| 1490|Homo sapiens CrkRS protein.
Length = 1490
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +3
Query: 120 RSLEKDRQSEGSRSYGLGKDSSFQGTGS 203
++L K+R GS S+ LG+ SS+QGTGS
Sbjct: 1368 QTLVKNRTFSGSLSH-LGESSSYQGTGS 1394
>AB020711-1|BAA74927.2| 1535|Homo sapiens KIAA0904 protein protein.
Length = 1535
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +3
Query: 120 RSLEKDRQSEGSRSYGLGKDSSFQGTGS 203
++L K+R GS S+ LG+ SS+QGTGS
Sbjct: 1413 QTLVKNRTFSGSLSH-LGESSSYQGTGS 1439
>DQ231553-1|ABB70145.1| 124|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 124
Score = 29.1 bits (62), Expect = 4.1
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = -2
Query: 333 RGCDTIAFATTKNSSDSLNSNRRADIDVTQYSST--AYIKPIRVIGSQFLETSCLYQVHM 160
+G + I + +T N + R + +T +ST AY++ +R +GS +T+ Y
Sbjct: 43 QGLEWIGWVSTYNGRTNYAQKFRGRVTMTTDTSTNTAYME-LRSLGSD--DTAVFYCAR- 98
Query: 159 IWNLHFADLFQVSGYSFDDFVLF 91
D ++ SGY++DDF ++
Sbjct: 99 -------DYYETSGYAYDDFAIW 114
>BC051309-1|AAH51309.1| 149|Homo sapiens zinc finger protein 69
protein.
Length = 149
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = -2
Query: 345 SPEVRGCDTIAFATTKNSSDSLNSNRRADIDVTQYSSTAY 226
SPE++ CD+ + S N N R DI Y Y
Sbjct: 106 SPEIKSCDSFVCGEVGLGNSSFNMNIRGDIGHKAYEYQEY 145
>BC063800-1|AAH63800.1| 1000|Homo sapiens SEC23 interacting protein
protein.
Length = 1000
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = -2
Query: 258 IDVTQYSSTAYIKPIRVIGSQFLETSCLYQVHMIWNLHFADLFQVSGYSFDDFVLFNIL 82
+D+ Y+S Y + I + +E + L+ + M N F V+G+S +LF+IL
Sbjct: 537 LDILFYNSPTYCQTI--VEKVGMEINHLHALFMSRNPDFKGGVSVAGHSLGSLILFDIL 593
>AB019435-1|BAA77392.1| 1000|Homo sapiens phospholipase protein.
Length = 1000
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = -2
Query: 258 IDVTQYSSTAYIKPIRVIGSQFLETSCLYQVHMIWNLHFADLFQVSGYSFDDFVLFNIL 82
+D+ Y+S Y + I + +E + L+ + M N F V+G+S +LF+IL
Sbjct: 537 LDILFYNSPTYCQTI--VEKVGMEINHLHALFMSRNPDFKGGVSVAGHSLGSLILFDIL 593
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,227,075
Number of Sequences: 237096
Number of extensions: 941486
Number of successful extensions: 1996
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1996
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2084089752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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