Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_H12
         (289 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    22   1.7  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    22   1.7  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    20   7.0  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    19   9.2  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     19   9.2  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    19   9.2  

>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.8 bits (44), Expect = 1.7
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = -3

Query: 284 HHWRLCQRLQRSNPRASASSCGVPHGTK 201
           H   LC    R N ++   SC  P G K
Sbjct: 42  HCSHLCLPAPRINSKSPLLSCACPDGLK 69


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 21.8 bits (44), Expect = 1.7
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = -3

Query: 284 HHWRLCQRLQRSNPRASASSCGVPHGTK 201
           H   LC    R N ++   SC  P G K
Sbjct: 42  HCSHLCLPAPRINSKSPLLSCACPDGLK 69


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 19.8 bits (39), Expect = 7.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 6   RHEGWVSTSII 38
           R E WV+TS+I
Sbjct: 271 RVESWVNTSVI 281


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = -1

Query: 79  LRLNFGAPNFPVVFMIDVDTHPSCRI 2
           + L     N PVV     + HP+C +
Sbjct: 161 ISLGLHRANEPVVLDDSKEEHPTCAL 186


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +1

Query: 139 QVQPDHPTEIVYEPYQP 189
           QV PD  + + Y  Y P
Sbjct: 415 QVSPDRTSPMEYRLYNP 431


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -1

Query: 286 HIIGDCAND 260
           HI+ DC ND
Sbjct: 170 HILDDCDND 178


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,410
Number of Sequences: 438
Number of extensions: 1156
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5744526
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)