Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_H11
         (327 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    23   3.9  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    22   6.8  
DQ004400-1|AAY21239.1|  144|Anopheles gambiae lysozyme c-5 protein.    22   6.8  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    22   6.8  
AJ821850-1|CAH25390.1|  426|Anopheles gambiae alpha-2,6-sialyltr...    21   8.9  
AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450 CY...    21   8.9  

>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
 Frame = +2

Query: 8   EQKKTIESINSRLALVMK--SGKYCLGY 85
           + K T+ES+ S+LAL +   +  Y LG+
Sbjct: 153 DDKATLESMGSQLALALANLTANYQLGF 180


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -1

Query: 210 WWTPVLAR 187
           WW+P+LAR
Sbjct: 345 WWSPLLAR 352


>DQ004400-1|AAY21239.1|  144|Anopheles gambiae lysozyme c-5 protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +2

Query: 233 LGTACGKYYRVCTLA 277
           LGT  GK Y  C LA
Sbjct: 14  LGTCSGKIYNRCELA 28


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 45  WLWL*SLANTAWATNKL 95
           WLWL  L +  W T  L
Sbjct: 119 WLWLLWLLSQTWITRHL 135


>AJ821850-1|CAH25390.1|  426|Anopheles gambiae
           alpha-2,6-sialyltransferase protein.
          Length = 426

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = +2

Query: 170 IEYYALLAKTGVHHYSGNNIELGTACGKYY 259
           +EY       G+ HY  + + LG   G ++
Sbjct: 361 VEYIPSTRMNGLCHYYDDELNLGCTFGAWH 390


>AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450
           CYP9L1 protein protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 260 RVCTLAITDPGDSDII 307
           R+C    T PGD DI+
Sbjct: 405 RMCNQDYTIPGDPDIV 420


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 367,811
Number of Sequences: 2352
Number of extensions: 6967
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 22477884
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)