Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_H11
(327 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032631-5|CAA21573.1| 113|Caenorhabditis elegans Hypothetical ... 173 3e-44
L17337-6|AAA28221.2| 44|Caenorhabditis elegans Hypothetical pr... 31 0.26
Z71186-8|CAA94917.2| 1322|Caenorhabditis elegans Hypothetical pr... 29 1.0
U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain, un... 27 3.2
AF016655-4|AAY55854.1| 144|Caenorhabditis elegans Hypothetical ... 27 4.2
Z70285-2|CAA94289.2| 183|Caenorhabditis elegans Hypothetical pr... 26 5.6
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 26 5.6
U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical pr... 26 5.6
Z49126-2|CAA88939.2| 411|Caenorhabditis elegans Hypothetical pr... 26 7.4
U00065-9|AAA50738.2| 1009|Caenorhabditis elegans Hypothetical pr... 25 9.7
>AL032631-5|CAA21573.1| 113|Caenorhabditis elegans Hypothetical
protein Y106G6H.3 protein.
Length = 113
Score = 173 bits (420), Expect = 3e-44
Identities = 78/102 (76%), Positives = 92/102 (90%)
Frame = +2
Query: 14 KKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLA 193
+K E+INSRL++VMK+G+Y LGYKQTLK+L GKAKLVIIA N PPLRKSEIEYYA+LA
Sbjct: 8 QKNAENINSRLSMVMKTGQYVLGYKQTLKSLLNGKAKLVIIANNTPPLRKSEIEYYAMLA 67
Query: 194 KTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLP 319
KTGVHHY+GNNIELGTACG+ +RVCTLA+TD GDSDII ++P
Sbjct: 68 KTGVHHYNGNNIELGTACGRLFRVCTLAVTDAGDSDIILSVP 109
>L17337-6|AAA28221.2| 44|Caenorhabditis elegans Hypothetical
protein ZK686.1 protein.
Length = 44
Score = 30.7 bits (66), Expect = 0.26
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +2
Query: 50 LVMKSGKYCLGYKQTLKTLRQGKAKLVI 133
+VMK+G+Y L Y+Q LK+L AKLVI
Sbjct: 1 MVMKTGQYVL-YEQKLKSLLNENAKLVI 27
>Z71186-8|CAA94917.2| 1322|Caenorhabditis elegans Hypothetical
protein F23D12.2 protein.
Length = 1322
Score = 28.7 bits (61), Expect = 1.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 148 ASSEEVGDRILCSPSQNRCPPLQ 216
+S+E+VG +LC P Q PPL+
Sbjct: 344 SSTEDVGITVLCVPHQELIPPLE 366
>U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 6 protein.
Length = 2098
Score = 27.1 bits (57), Expect = 3.2
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 176 YYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSD 301
+Y LLA G+ + +ELGTA YY + +T G D
Sbjct: 252 FYCLLA--GLSREEKSELELGTAADYYYLIQGKTLTAEGRDD 291
>AF016655-4|AAY55854.1| 144|Caenorhabditis elegans Hypothetical
protein C17F4.11 protein.
Length = 144
Score = 26.6 bits (56), Expect = 4.2
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +2
Query: 95 LKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKT-GVHHYSGNNIELGTACGKYYRVCT 271
L+T L II P+ + Y + KT GV HY GN +L + K+ R
Sbjct: 15 LRTYENSNQLLQIIVNARKPVL---VFGYPVSNKTKGVVHYEGNEFDLRSFLKKFNRQME 71
Query: 272 LAITDPGDSDIITTLPEA 325
+ + +D + TL A
Sbjct: 72 IFFKESESNDWLFTLYNA 89
>Z70285-2|CAA94289.2| 183|Caenorhabditis elegans Hypothetical
protein F56C4.2 protein.
Length = 183
Score = 26.2 bits (55), Expect = 5.6
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -2
Query: 251 FRKQYRAQYCFHCSGGHLFWLGEHNILSPT 162
FR YR YCF+ S + + H + +PT
Sbjct: 79 FRFYYRRSYCFYNSRCYSLTMSCHPVATPT 108
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 26.2 bits (55), Expect = 5.6
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 145 CASSEEVGDRILCSPSQNRCPPLQWKQ 225
C + EE D CSP N+C ++ Q
Sbjct: 475 CQNEEECVDHSYCSPETNKCECMKASQ 501
>U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical
protein F48E3.8b protein.
Length = 1299
Score = 26.2 bits (55), Expect = 5.6
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 145 CASSEEVGDRILCSPSQNRCPPLQWKQ 225
C + EE D CSP N+C ++ Q
Sbjct: 475 CQNEEECVDHSYCSPETNKCECMKASQ 501
>Z49126-2|CAA88939.2| 411|Caenorhabditis elegans Hypothetical
protein DH11.2 protein.
Length = 411
Score = 25.8 bits (54), Expect = 7.4
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 17 KTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVI 133
KT++ IN + L C G+++ L+ L++ KL +
Sbjct: 182 KTLQEINLDIVLSDNEDVTCAGFRELLRFLKEISYKLTV 220
>U00065-9|AAA50738.2| 1009|Caenorhabditis elegans Hypothetical
protein D1044.6 protein.
Length = 1009
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/46 (21%), Positives = 25/46 (54%)
Frame = +1
Query: 133 HRQECASSEEVGDRILCSPSQNRCPPLQWKQY*ARYCLRKILQSMY 270
H ++ A ++ + D +C P ++ PP ++ + +C +L S++
Sbjct: 857 HTRDAAYADYMHD--VCKPYEDMLPPTEYHEIFNEWCFTPMLASLH 900
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,066,672
Number of Sequences: 27780
Number of extensions: 159988
Number of successful extensions: 381
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 381
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 398409266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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