Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_H10
(270 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 29 0.013
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 29 0.013
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 27 0.031
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 27 0.031
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 27 0.031
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 26 0.072
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 23 0.67
AY526236-1|AAS20469.1| 85|Apis mellifera epoxide hydrolase pro... 23 0.88
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 0.88
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 1.5
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 1.5
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 21 2.7
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 3.6
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 3.6
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 20 4.7
AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier... 20 6.2
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 19 8.2
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 28.7 bits (61), Expect = 0.013
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +3
Query: 87 KNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPNY 212
KN++ +++Y+ K R +T+ K + N YN NY
Sbjct: 273 KNEREYRKYRETSKGRSRDRTERERSKETKIISSNNYNYKNY 314
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 28.7 bits (61), Expect = 0.013
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +3
Query: 87 KNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPNY 212
KN++ +++Y+ K R +T+ K + N YN NY
Sbjct: 284 KNEREYRKYRETSKGRSRDRTERERSKETKIISSNNYNYKNY 325
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 27.5 bits (58), Expect = 0.031
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +3
Query: 78 KVVKNKQYFKRYQVKFKRRREGKTDYYARK--RLVVQDKNK--YNTPNYRLIVRLSNKDV 245
K KN+ +++Y+ +K R +T+ + +++ NK +N NY+ +N +
Sbjct: 48 KSYKNENSYRKYRETWKERSRDRTERERSREPKIISSLSNKTIHNNNNYKYNYNNNNYNN 107
Query: 246 TCKVAY 263
CK Y
Sbjct: 108 NCKKLY 113
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 27.5 bits (58), Expect = 0.031
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +3
Query: 78 KVVKNKQYFKRYQVKFKRRREGKTDYYARK--RLVVQDKNK--YNTPNYRLIVRLSNKDV 245
K KN+ +++Y+ +K R +T+ + +++ NK +N NY+ +N +
Sbjct: 48 KSYKNENSYRKYRETWKERSRDRTERERSREPKIISSLSNKTIHNNNNYKYNYNNNNYNN 107
Query: 246 TCKVAY 263
CK Y
Sbjct: 108 NCKKLY 113
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 27.5 bits (58), Expect = 0.031
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +3
Query: 78 KVVKNKQYFKRYQVKFKRRREGKTDYYARK--RLVVQDKNK--YNTPNYRLIVRLSNKDV 245
K KN+ +++Y+ +K R +T+ + +++ NK +N NY+ +N +
Sbjct: 48 KSYKNENSYRKYRETWKERSRDRTERERSREPKIISSLSNKTIHNNNNYKYNYNNNNYNN 107
Query: 246 TCKVAY 263
CK Y
Sbjct: 108 NCKKLY 113
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 26.2 bits (55), Expect = 0.072
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +3
Query: 78 KVVKNKQYFKRYQVKFKRRREGKTDYYARK--RLVVQDKNK--YNTPNYRLIVRLSNKDV 245
K KN+ +++Y+ +K R +T+ + +++ N+ +N NY+ +N +
Sbjct: 48 KSYKNENSYRKYRETWKERSRDRTERERSREPKIISSLSNRTIHNNNNYKYNYNNNNYNN 107
Query: 246 TCKVAY 263
CK Y
Sbjct: 108 NCKKLY 113
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 23.0 bits (47), Expect = 0.67
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = +3
Query: 147 TDYYARKRLVVQDKNKYNTPNYRLIVRLSNKDVTCKVAY 263
TD RK ++ +++ K ++ ++V + N+D +AY
Sbjct: 288 TDTLIRKYIIPKEQVKEDSLYTNIVVDIRNEDCGSAIAY 326
>AY526236-1|AAS20469.1| 85|Apis mellifera epoxide hydrolase
protein.
Length = 85
Score = 22.6 bits (46), Expect = 0.88
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 189 FYPGQRGVCEHSSQFFP 139
++P G EH S+FFP
Sbjct: 45 YFPSLIGANEHYSKFFP 61
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 22.6 bits (46), Expect = 0.88
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 78 KVVKNKQYFKRYQVKFKRRREGKTDYYARK--RLVVQDKNKY--NTPNY 212
K KN+ +++Y+ K R KT+ K +++ N Y N NY
Sbjct: 286 KSYKNENSYRKYRETSKERSRDKTERERSKERKIISSLSNNYISNISNY 334
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 1.5
Identities = 12/50 (24%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +3
Query: 78 KVVKNKQYFKRYQV----KFKRRREGKTDYYARKRLVVQDKNKYNTPNYR 215
K KN++ +++Y+ +F+ RRE + ++ + +K +N NY+
Sbjct: 281 KSYKNEREYRKYRETSKERFRDRRERERSKESKIISSLSNKTIHNNNNYK 330
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 1.5
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = -1
Query: 195 ICFYPGQRGVCEHSSQFFPH 136
+C +PG +CE F H
Sbjct: 282 VCKWPGCEVICEDYQAFLKH 301
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 21.0 bits (42), Expect = 2.7
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -3
Query: 199 LYLFLSWTTRRLRA**SVFPSRRLLNLTW 113
++L SW RLR ++ R+L++ W
Sbjct: 55 IFLAQSWRDSRLRLPENMSEDYRILDVDW 83
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 20.6 bits (41), Expect = 3.6
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 224 YNQSVVWSVVFVFILDNEAF 165
Y SV W ++ V + NEAF
Sbjct: 196 YYISVEWDIIKVPAVRNEAF 215
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 20.6 bits (41), Expect = 3.6
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +3
Query: 105 KRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPNYR 215
++ Q + ++ ++ + +Y A LVVQ + YN+ N R
Sbjct: 1534 QQQQQQQQQPQQQQKEYGAVSGLVVQLQRGYNSGNNR 1570
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 20.2 bits (40), Expect = 4.7
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 5 FGTRVLWALCGYFDFRNI 58
FGTR +++ GY+ I
Sbjct: 62 FGTRWIFSCIGYYKLNKI 79
>AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier
protein JHBP-1 protein.
Length = 253
Score = 19.8 bits (39), Expect = 6.2
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -1
Query: 84 LLSRIPFSKIF 52
+ +R+PF KIF
Sbjct: 240 IFNRVPFDKIF 250
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 19.4 bits (38), Expect = 8.2
Identities = 8/31 (25%), Positives = 15/31 (48%)
Frame = -3
Query: 199 LYLFLSWTTRRLRA**SVFPSRRLLNLTWYR 107
++ +W RLR ++ RLL + W +
Sbjct: 86 IFFAQTWKDNRLRLPENMTSEYRLLEVDWLK 116
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,294
Number of Sequences: 438
Number of extensions: 1627
Number of successful extensions: 25
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used: 5138079
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
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