Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_H09
(213 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL513304-1|CAH73405.1| 739|Homo sapiens adenosine deaminase, RN... 36 0.018
AL392083-3|CAH72171.1| 739|Homo sapiens adenosine deaminase, RN... 36 0.018
AF034837-1|AAF78094.1| 739|Homo sapiens double-stranded RNA spe... 36 0.018
BC108731-1|AAI08732.1| 589|Homo sapiens STRBP protein protein. 30 1.6
BC017732-1|AAH17732.1| 672|Homo sapiens spermatid perinuclear R... 30 1.6
BC002693-1|AAH02693.2| 615|Homo sapiens STRBP protein protein. 30 1.6
AL365338-5|CAH70300.1| 672|Homo sapiens spermatid perinuclear R... 30 1.6
AL365338-4|CAH70299.1| 658|Homo sapiens spermatid perinuclear R... 30 1.6
AK027890-1|BAB55434.1| 672|Homo sapiens protein ( Homo sapiens ... 30 1.6
AK024285-1|BAB14873.1| 405|Homo sapiens protein ( Homo sapiens ... 30 1.6
AK002169-1|BAA92120.1| 490|Homo sapiens spermatid perinuclear R... 30 1.6
AF333337-1|AAK20832.1| 673|Homo sapiens spermatid perinuclear R... 30 1.6
S81585-1|AAB36122.1| 131|Homo sapiens Mutant, 132 nt]. protein. 29 2.7
M59815-1|AAA51855.1| 1744|Homo sapiens complement component C4A ... 29 2.7
K02403-1|AAB59537.1| 1754|Homo sapiens complement component C4A ... 29 2.7
BX679671-6|CAM26069.1| 1744|Homo sapiens complement component C4... 29 2.7
BX679671-3|CAM26066.1| 1744|Homo sapiens complement component C4... 29 2.7
BC151204-1|AAI51205.1| 1744|Homo sapiens complement component 4A... 29 2.7
BC146673-1|AAI46674.1| 1698|Homo sapiens C4B protein protein. 29 2.7
BC063289-1|AAH63289.1| 1744|Homo sapiens complement component 4A... 29 2.7
AY379959-1|AAR89163.1| 1744|Homo sapiens C4B1 protein. 29 2.7
AL929593-4|CAI41782.1| 1744|Homo sapiens complement component 4A... 29 2.7
AL844853-21|CAI41869.1| 1744|Homo sapiens complement component 4... 29 2.7
AL662849-17|CAI17475.1| 1744|Homo sapiens complement component 4... 29 2.7
AL645922-22|CAI41750.1| 1744|Homo sapiens complement component 4... 29 2.7
AL645922-17|CAI41744.1| 1744|Homo sapiens complement component 4... 29 2.7
AL049547-8|CAB89302.1| 1744|Homo sapiens dJ34F7.4 (complement co... 29 2.7
AF019413-3|AAB67980.1| 1744|Homo sapiens complement component C4... 29 2.7
AB209989-1|BAE06071.1| 1751|Homo sapiens C4A variant protein pro... 29 2.7
>AL513304-1|CAH73405.1| 739|Homo sapiens adenosine deaminase,
RNA-specific, B2 (RED2 homolog rat) protein.
Length = 739
Score = 36.3 bits (80), Expect = 0.018
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +2
Query: 68 TFTVALDLDGNTYIGKASSKREARKEAGRVACYELFKVEFGPNA 199
+F +A+ +DG T+ G SK+ AR +A + A ELF ++ +A
Sbjct: 305 SFVMAVSVDGRTFEGSGRSKKLARGQAAQAALQELFDIQMPGHA 348
>AL392083-3|CAH72171.1| 739|Homo sapiens adenosine deaminase,
RNA-specific, B2 (RED2 homolog rat) protein.
Length = 739
Score = 36.3 bits (80), Expect = 0.018
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +2
Query: 68 TFTVALDLDGNTYIGKASSKREARKEAGRVACYELFKVEFGPNA 199
+F +A+ +DG T+ G SK+ AR +A + A ELF ++ +A
Sbjct: 305 SFVMAVSVDGRTFEGSGRSKKLARGQAAQAALQELFDIQMPGHA 348
>AF034837-1|AAF78094.1| 739|Homo sapiens double-stranded RNA
specific adenosine deaminase protein.
Length = 739
Score = 36.3 bits (80), Expect = 0.018
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +2
Query: 68 TFTVALDLDGNTYIGKASSKREARKEAGRVACYELFKVEFGPNA 199
+F +A+ +DG T+ G SK+ AR +A + A ELF ++ +A
Sbjct: 305 SFVMAVSVDGRTFEGSGRSKKLARGQAAQAALQELFDIQMPGHA 348
>BC108731-1|AAI08732.1| 589|Homo sapiens STRBP protein protein.
Length = 589
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 65 PTFTVALDLDGNTYIGKASSKREAR 139
P FT+++D+DG TY SK+ A+
Sbjct: 416 PVFTMSVDVDGTTYEASGPSKKTAK 440
>BC017732-1|AAH17732.1| 672|Homo sapiens spermatid perinuclear RNA
binding protein protein.
Length = 672
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 65 PTFTVALDLDGNTYIGKASSKREAR 139
P FT+++D+DG TY SK+ A+
Sbjct: 416 PVFTMSVDVDGTTYEASGPSKKTAK 440
>BC002693-1|AAH02693.2| 615|Homo sapiens STRBP protein protein.
Length = 615
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 65 PTFTVALDLDGNTYIGKASSKREAR 139
P FT+++D+DG TY SK+ A+
Sbjct: 359 PVFTMSVDVDGTTYEASGPSKKTAK 383
>AL365338-5|CAH70300.1| 672|Homo sapiens spermatid perinuclear RNA
binding protein protein.
Length = 672
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 65 PTFTVALDLDGNTYIGKASSKREAR 139
P FT+++D+DG TY SK+ A+
Sbjct: 416 PVFTMSVDVDGTTYEASGPSKKTAK 440
>AL365338-4|CAH70299.1| 658|Homo sapiens spermatid perinuclear RNA
binding protein protein.
Length = 658
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 65 PTFTVALDLDGNTYIGKASSKREAR 139
P FT+++D+DG TY SK+ A+
Sbjct: 402 PVFTMSVDVDGTTYEASGPSKKTAK 426
>AK027890-1|BAB55434.1| 672|Homo sapiens protein ( Homo sapiens
cDNA FLJ14984 fis, clone Y79AA1000349, highly similar to
M.musculus Spnr mRNA for RNA binding protein. ).
Length = 672
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 65 PTFTVALDLDGNTYIGKASSKREAR 139
P FT+++D+DG TY SK+ A+
Sbjct: 416 PVFTMSVDVDGTTYEASGPSKKTAK 440
>AK024285-1|BAB14873.1| 405|Homo sapiens protein ( Homo sapiens
cDNA FLJ14223 fis, clone NT2RP3004013, highly similar to
M.musculus Spnr mRNA for RNA binding protein. ).
Length = 405
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 65 PTFTVALDLDGNTYIGKASSKREAR 139
P FT+++D+DG TY SK+ A+
Sbjct: 149 PVFTMSVDVDGTTYEASGPSKKTAK 173
>AK002169-1|BAA92120.1| 490|Homo sapiens spermatid perinuclear
RNA-binding protein. protein.
Length = 490
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 65 PTFTVALDLDGNTYIGKASSKREAR 139
P FT+++D+DG TY SK+ A+
Sbjct: 234 PVFTMSVDVDGTTYEASGPSKKTAK 258
>AF333337-1|AAK20832.1| 673|Homo sapiens spermatid perinuclear
RNA-binding protein protein.
Length = 673
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 65 PTFTVALDLDGNTYIGKASSKREAR 139
P FT+++D+DG TY SK+ A+
Sbjct: 417 PVFTMSVDVDGTTYEASGPSKKTAK 441
>S81585-1|AAB36122.1| 131|Homo sapiens Mutant, 132 nt]. protein.
Length = 131
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 89 LDGNTYIGKASSKREARKEAGRVACYEL--FKVEFGPNACDL 208
LD N++I + S+R R R AC +L F E+G C +
Sbjct: 90 LDSNSWIEEMPSERLCRSTRQRAACAQLNDFLQEYGTQGCQV 131
>M59815-1|AAA51855.1| 1744|Homo sapiens complement component C4A
protein.
Length = 1744
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 89 LDGNTYIGKASSKREARKEAGRVACYEL--FKVEFGPNACDL 208
LD N++I + S+R R R AC +L F E+G C +
Sbjct: 1703 LDSNSWIEEMPSERLCRSTRQRAACAQLNDFLQEYGTQGCQV 1744
>K02403-1|AAB59537.1| 1754|Homo sapiens complement component C4A
protein.
Length = 1754
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 89 LDGNTYIGKASSKREARKEAGRVACYEL--FKVEFGPNACDL 208
LD N++I + S+R R R AC +L F E+G C +
Sbjct: 1713 LDSNSWIEEMPSERLCRSTRQRAACAQLNDFLQEYGTQGCQV 1754
>BX679671-6|CAM26069.1| 1744|Homo sapiens complement component C4B
(Childo blood group) 2 protein.
Length = 1744
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 89 LDGNTYIGKASSKREARKEAGRVACYEL--FKVEFGPNACDL 208
LD N++I + S+R R R AC +L F E+G C +
Sbjct: 1703 LDSNSWIEEMPSERLCRSTRQRAACAQLNDFLQEYGTQGCQV 1744
>BX679671-3|CAM26066.1| 1744|Homo sapiens complement component C4B
(Childo blood group) protein.
Length = 1744
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 89 LDGNTYIGKASSKREARKEAGRVACYEL--FKVEFGPNACDL 208
LD N++I + S+R R R AC +L F E+G C +
Sbjct: 1703 LDSNSWIEEMPSERLCRSTRQRAACAQLNDFLQEYGTQGCQV 1744
>BC151204-1|AAI51205.1| 1744|Homo sapiens complement component 4A
(Rodgers blood group) protein.
Length = 1744
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 89 LDGNTYIGKASSKREARKEAGRVACYEL--FKVEFGPNACDL 208
LD N++I + S+R R R AC +L F E+G C +
Sbjct: 1703 LDSNSWIEEMPSERLCRSTRQRAACAQLNDFLQEYGTQGCQV 1744
>BC146673-1|AAI46674.1| 1698|Homo sapiens C4B protein protein.
Length = 1698
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 89 LDGNTYIGKASSKREARKEAGRVACYEL--FKVEFGPNACDL 208
LD N++I + S+R R R AC +L F E+G C +
Sbjct: 1657 LDSNSWIEEMPSERLCRSTRQRAACAQLNDFLQEYGTQGCQV 1698
>BC063289-1|AAH63289.1| 1744|Homo sapiens complement component 4A
(Rodgers blood group) protein.
Length = 1744
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 89 LDGNTYIGKASSKREARKEAGRVACYEL--FKVEFGPNACDL 208
LD N++I + S+R R R AC +L F E+G C +
Sbjct: 1703 LDSNSWIEEMPSERLCRSTRQRAACAQLNDFLQEYGTQGCQV 1744
>AY379959-1|AAR89163.1| 1744|Homo sapiens C4B1 protein.
Length = 1744
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 89 LDGNTYIGKASSKREARKEAGRVACYEL--FKVEFGPNACDL 208
LD N++I + S+R R R AC +L F E+G C +
Sbjct: 1703 LDSNSWIEEMPSERLCRSTRQRAACAQLNDFLQEYGTQGCQV 1744
>AL929593-4|CAI41782.1| 1744|Homo sapiens complement component 4A
(Rodgers blood group) protein.
Length = 1744
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 89 LDGNTYIGKASSKREARKEAGRVACYEL--FKVEFGPNACDL 208
LD N++I + S+R R R AC +L F E+G C +
Sbjct: 1703 LDSNSWIEEMPSERLCRSTRQRAACAQLNDFLQEYGTQGCQV 1744
>AL844853-21|CAI41869.1| 1744|Homo sapiens complement component 4A
protein.
Length = 1744
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 89 LDGNTYIGKASSKREARKEAGRVACYEL--FKVEFGPNACDL 208
LD N++I + S+R R R AC +L F E+G C +
Sbjct: 1703 LDSNSWIEEMPSERLCRSTRQRAACAQLNDFLQEYGTQGCQV 1744
>AL662849-17|CAI17475.1| 1744|Homo sapiens complement component 4B
(Childo blood group) protein.
Length = 1744
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 89 LDGNTYIGKASSKREARKEAGRVACYEL--FKVEFGPNACDL 208
LD N++I + S+R R R AC +L F E+G C +
Sbjct: 1703 LDSNSWIEEMPSERLCRSTRQRAACAQLNDFLQEYGTQGCQV 1744
>AL645922-22|CAI41750.1| 1744|Homo sapiens complement component 4A
(Rodgers blood group) protein.
Length = 1744
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 89 LDGNTYIGKASSKREARKEAGRVACYEL--FKVEFGPNACDL 208
LD N++I + S+R R R AC +L F E+G C +
Sbjct: 1703 LDSNSWIEEMPSERLCRSTRQRAACAQLNDFLQEYGTQGCQV 1744
>AL645922-17|CAI41744.1| 1744|Homo sapiens complement component 4B
(Childo blood group) protein.
Length = 1744
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 89 LDGNTYIGKASSKREARKEAGRVACYEL--FKVEFGPNACDL 208
LD N++I + S+R R R AC +L F E+G C +
Sbjct: 1703 LDSNSWIEEMPSERLCRSTRQRAACAQLNDFLQEYGTQGCQV 1744
>AL049547-8|CAB89302.1| 1744|Homo sapiens dJ34F7.4 (complement
component 4A) protein.
Length = 1744
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 89 LDGNTYIGKASSKREARKEAGRVACYEL--FKVEFGPNACDL 208
LD N++I + S+R R R AC +L F E+G C +
Sbjct: 1703 LDSNSWIEEMPSERLCRSTRQRAACAQLNDFLQEYGTQGCQV 1744
>AF019413-3|AAB67980.1| 1744|Homo sapiens complement component C4
protein.
Length = 1744
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 89 LDGNTYIGKASSKREARKEAGRVACYEL--FKVEFGPNACDL 208
LD N++I + S+R R R AC +L F E+G C +
Sbjct: 1703 LDSNSWIEEMPSERLCRSTRQRAACAQLNDFLQEYGTQGCQV 1744
>AB209989-1|BAE06071.1| 1751|Homo sapiens C4A variant protein protein.
Length = 1751
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 89 LDGNTYIGKASSKREARKEAGRVACYEL--FKVEFGPNACDL 208
LD N++I + S+R R R AC +L F E+G C +
Sbjct: 1710 LDSNSWIEEMPSERLCRSTRQRAACAQLNDFLQEYGTQGCQV 1751
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,793,801
Number of Sequences: 237096
Number of extensions: 348734
Number of successful extensions: 1128
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1128
length of database: 76,859,062
effective HSP length: 49
effective length of database: 65,241,358
effective search space used: 1370068518
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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