SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_H09
         (213 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z96100-3|CAD60418.1|  893|Caenorhabditis elegans Hypothetical pr...    33   0.021
Z96100-2|CAD60417.1|  912|Caenorhabditis elegans Hypothetical pr...    33   0.021
Z96100-1|CAB09530.2|  964|Caenorhabditis elegans Hypothetical pr...    33   0.021
AY150817-1|AAN61051.1|  893|Caenorhabditis elegans ADR-1E protein.     33   0.021
AY150816-1|AAN61050.1|  912|Caenorhabditis elegans ADR-1D protein.     33   0.021
AY150815-1|AAN61049.1|  964|Caenorhabditis elegans ADR-1C protein.     33   0.021
AL031635-3|CAB54383.1|  149|Caenorhabditis elegans Hypothetical ...    26   3.2  
AL031635-2|CAA21040.1|  164|Caenorhabditis elegans Hypothetical ...    26   3.2  
U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical pr...    25   5.5  
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans...    25   5.5  
AF025462-7|AAB71003.1|  805|Caenorhabditis elegans Hypothetical ...    25   5.5  
Z66515-2|CAA91353.1|  543|Caenorhabditis elegans Hypothetical pr...    25   7.3  
Z34799-2|CAA84318.1|  692|Caenorhabditis elegans Hypothetical pr...    25   7.3  
S66757-1|AAB28819.1|  581|Caenorhabditis elegans Egl-43 protein.       25   7.3  
AL132858-4|CAB60479.2|  338|Caenorhabditis elegans Hypothetical ...    25   7.3  
AF381627-1|AAL12000.1|  332|Caenorhabditis elegans homeodomain p...    25   7.3  
AF016683-1|AAB66199.3| 1360|Caenorhabditis elegans Hypothetical ...    25   7.3  
AF003141-3|AAK21484.1|  135|Caenorhabditis elegans Lipid binding...    25   7.3  
AC024211-5|AAF36063.2| 1119|Caenorhabditis elegans Hypothetical ...    25   7.3  
Z93388-8|CAB07656.1|  127|Caenorhabditis elegans Hypothetical pr...    25   9.7  
Z92789-4|CAB07221.1|  127|Caenorhabditis elegans Hypothetical pr...    25   9.7  
Z83245-10|CAB05838.1|  127|Caenorhabditis elegans Hypothetical p...    25   9.7  
Z83245-6|CAB05836.1|  127|Caenorhabditis elegans Hypothetical pr...    25   9.7  
Z82271-4|CAB05212.1|  127|Caenorhabditis elegans Hypothetical pr...    25   9.7  
Z81495-2|CAB04056.1|  127|Caenorhabditis elegans Hypothetical pr...    25   9.7  
Z81128-6|CAB03399.1|  127|Caenorhabditis elegans Hypothetical pr...    25   9.7  
Z79695-2|CAB01971.2| 1008|Caenorhabditis elegans Hypothetical pr...    25   9.7  
Z73102-8|CAA97414.1|  127|Caenorhabditis elegans Hypothetical pr...    25   9.7  
Z70750-11|CAA94747.1|  127|Caenorhabditis elegans Hypothetical p...    25   9.7  
X15633-1|CAA33641.1|  127|Caenorhabditis elegans histone protein...    25   9.7  
U64845-8|AAC48024.1|  127|Caenorhabditis elegans Histone protein...    25   9.7  
U64843-8|AAF98222.1|  127|Caenorhabditis elegans Histone protein...    25   9.7  
U64843-5|AAF98219.1|  127|Caenorhabditis elegans Histone protein...    25   9.7  
U58750-7|AAB00647.1|  127|Caenorhabditis elegans Histone protein...    25   9.7  
U40934-9|AAA81686.1|  127|Caenorhabditis elegans Histone protein...    25   9.7  
AF067946-3|AAC17682.1|  288|Caenorhabditis elegans Hypothetical ...    25   9.7  
AF047656-4|AAC05100.1|  127|Caenorhabditis elegans Histone prote...    25   9.7  
AC024696-8|AAK84512.1|  127|Caenorhabditis elegans Histone prote...    25   9.7  
AC024696-5|AAK84506.1|  127|Caenorhabditis elegans Histone prote...    25   9.7  

>Z96100-3|CAD60418.1|  893|Caenorhabditis elegans Hypothetical
           protein H15N14.1e protein.
          Length = 893

 Score = 33.5 bits (73), Expect = 0.021
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +2

Query: 26  YRDVAAVYDGAPTPTFTVALDLDG-NTYIGKASSKREARKEAGRVACYELFKVEFGP 193
           ++D      G  T TF     +D  + YIG   SK+ A+ EA   A  +LFK+++ P
Sbjct: 479 FKDNVPPVAGQATTTFYCECVIDETDRYIGVGRSKKLAKSEAAMQALKKLFKIDYDP 535


>Z96100-2|CAD60417.1|  912|Caenorhabditis elegans Hypothetical
           protein H15N14.1d protein.
          Length = 912

 Score = 33.5 bits (73), Expect = 0.021
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +2

Query: 26  YRDVAAVYDGAPTPTFTVALDLDG-NTYIGKASSKREARKEAGRVACYELFKVEFGP 193
           ++D      G  T TF     +D  + YIG   SK+ A+ EA   A  +LFK+++ P
Sbjct: 479 FKDNVPPVAGQATTTFYCECVIDETDRYIGVGRSKKLAKSEAAMQALKKLFKIDYDP 535


>Z96100-1|CAB09530.2|  964|Caenorhabditis elegans Hypothetical
           protein H15N14.1c protein.
          Length = 964

 Score = 33.5 bits (73), Expect = 0.021
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +2

Query: 26  YRDVAAVYDGAPTPTFTVALDLDG-NTYIGKASSKREARKEAGRVACYELFKVEFGP 193
           ++D      G  T TF     +D  + YIG   SK+ A+ EA   A  +LFK+++ P
Sbjct: 550 FKDNVPPVAGQATTTFYCECVIDETDRYIGVGRSKKLAKSEAAMQALKKLFKIDYDP 606


>AY150817-1|AAN61051.1|  893|Caenorhabditis elegans ADR-1E protein.
          Length = 893

 Score = 33.5 bits (73), Expect = 0.021
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +2

Query: 26  YRDVAAVYDGAPTPTFTVALDLDG-NTYIGKASSKREARKEAGRVACYELFKVEFGP 193
           ++D      G  T TF     +D  + YIG   SK+ A+ EA   A  +LFK+++ P
Sbjct: 479 FKDNVPPVAGQATTTFYCECVIDETDRYIGVGRSKKLAKSEAAMQALKKLFKIDYDP 535


>AY150816-1|AAN61050.1|  912|Caenorhabditis elegans ADR-1D protein.
          Length = 912

 Score = 33.5 bits (73), Expect = 0.021
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +2

Query: 26  YRDVAAVYDGAPTPTFTVALDLDG-NTYIGKASSKREARKEAGRVACYELFKVEFGP 193
           ++D      G  T TF     +D  + YIG   SK+ A+ EA   A  +LFK+++ P
Sbjct: 479 FKDNVPPVAGQATTTFYCECVIDETDRYIGVGRSKKLAKSEAAMQALKKLFKIDYDP 535


>AY150815-1|AAN61049.1|  964|Caenorhabditis elegans ADR-1C protein.
          Length = 964

 Score = 33.5 bits (73), Expect = 0.021
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +2

Query: 26  YRDVAAVYDGAPTPTFTVALDLDG-NTYIGKASSKREARKEAGRVACYELFKVEFGP 193
           ++D      G  T TF     +D  + YIG   SK+ A+ EA   A  +LFK+++ P
Sbjct: 550 FKDNVPPVAGQATTTFYCECVIDETDRYIGVGRSKKLAKSEAAMQALKKLFKIDYDP 606


>AL031635-3|CAB54383.1|  149|Caenorhabditis elegans Hypothetical
          protein Y47D3B.2b protein.
          Length = 149

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -3

Query: 91 EVERDSEGGGGRAVIHRR 38
          E+E D + GG RA++H+R
Sbjct: 27 ELEEDEKRGGARAMLHKR 44


>AL031635-2|CAA21040.1|  164|Caenorhabditis elegans Hypothetical
          protein Y47D3B.2a protein.
          Length = 164

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -3

Query: 91 EVERDSEGGGGRAVIHRR 38
          E+E D + GG RA++H+R
Sbjct: 27 ELEEDEKRGGARAMLHKR 44


>U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical protein
            C27F2.8 protein.
          Length = 1715

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -1

Query: 189  PNSTLKSS*QATRPASLRAS 130
            P S++K    ATRP++LRAS
Sbjct: 1121 PESSIKKPTPATRPSTLRAS 1140


>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
           transcriptase protein.
          Length = 1066

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 26  YRDVAAVYDGAPTPTFTVALDLDGNTYIGK 115
           + D + VY G+P+PT T   D+D   Y+G+
Sbjct: 844 FADPSKVYFGSPSPT-TQLDDVDEYIYLGR 872


>AF025462-7|AAB71003.1|  805|Caenorhabditis elegans Hypothetical
           protein K10F12.5 protein.
          Length = 805

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 26  YRDVAAVYDGAPTPTFTVALDLDGNTYIGK 115
           + D + VY G+P+PT T   D+D   Y+G+
Sbjct: 583 FADPSKVYFGSPSPT-TQLDDVDEYIYLGR 611


>Z66515-2|CAA91353.1|  543|Caenorhabditis elegans Hypothetical
           protein R53.3a protein.
          Length = 543

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 61  HPHLHCRARPRRQHL 105
           H H+HC  +P R HL
Sbjct: 177 HSHIHCSLKPFRCHL 191


>Z34799-2|CAA84318.1|  692|Caenorhabditis elegans Hypothetical
           protein F34D10.4 protein.
          Length = 692

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 14/27 (51%), Positives = 14/27 (51%)
 Frame = -1

Query: 99  LPSRSSATVKVGVGAPSYTAATSRYPR 19
           L SRS AT  VG  APS   A S   R
Sbjct: 372 LESRSRATASVGARAPSRAPAPSSTSR 398


>S66757-1|AAB28819.1|  581|Caenorhabditis elegans Egl-43 protein.
          Length = 581

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 61  HPHLHCRARPRRQHL 105
           H H+HC  +P R HL
Sbjct: 177 HSHIHCSLKPFRCHL 191


>AL132858-4|CAB60479.2|  338|Caenorhabditis elegans Hypothetical
           protein Y113G7A.6b protein.
          Length = 338

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -1

Query: 114 FPM*VLPSRSSATVKVGVGAPSYTAATSRYP 22
           FPM  +P+ SSAT        +Y    S YP
Sbjct: 66  FPMSYIPNVSSATTVAAANMSAYFNQKSAYP 96


>AF381627-1|AAL12000.1|  332|Caenorhabditis elegans homeodomain
           protein TTX-1 protein.
          Length = 332

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -1

Query: 114 FPM*VLPSRSSATVKVGVGAPSYTAATSRYP 22
           FPM  +P+ SSAT        +Y    S YP
Sbjct: 60  FPMSYIPNVSSATTVAAANMSAYFNQKSAYP 90


>AF016683-1|AAB66199.3| 1360|Caenorhabditis elegans Hypothetical
            protein K09F6.3 protein.
          Length = 1360

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 47   YDGAPTPTFTVALDLDGNTYIGKASSKREARKEA 148
            +DG+   T  +ALD DG+    K   K+  +K A
Sbjct: 1285 FDGSDGKTVDIALDEDGHGIPEKKGKKKTNKKAA 1318


>AF003141-3|AAK21484.1|  135|Caenorhabditis elegans Lipid binding
           protein protein 6 protein.
          Length = 135

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 181 NFEEFVAGDAPGLLTRLALTRRFPDVGVAVE 89
           NFEE++     GL+TR A     P + + VE
Sbjct: 16  NFEEYMKEVGVGLITRKAAANLKPTLEIKVE 46


>AC024211-5|AAF36063.2| 1119|Caenorhabditis elegans Hypothetical
           protein Y76B12C.2 protein.
          Length = 1119

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
 Frame = -3

Query: 190 SEFNFEEFVAGDAPGLLTRLALTRRF--PDVGVAVEVERDSEGGGG 59
           SE N E+  AGD+            F  P +   +EV  D EGGGG
Sbjct: 448 SEKNDEKNTAGDSSSSEDEWEEMEHFQPPIIDDNIEVSIDHEGGGG 493


>Z93388-8|CAB07656.1|  127|Caenorhabditis elegans Hypothetical
           protein T10C6.12 protein.
          Length = 127

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 72  KVGVGAPSYTAATSRYPRAE 13
           +VG GAP Y AA   Y  AE
Sbjct: 44  RVGAGAPVYLAAVLEYLAAE 63


>Z92789-4|CAB07221.1|  127|Caenorhabditis elegans Hypothetical
           protein H02I12.7 protein.
          Length = 127

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 72  KVGVGAPSYTAATSRYPRAE 13
           +VG GAP Y AA   Y  AE
Sbjct: 44  RVGAGAPVYLAAVLEYLAAE 63


>Z83245-10|CAB05838.1|  127|Caenorhabditis elegans Hypothetical
           protein ZK131.10 protein.
          Length = 127

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 72  KVGVGAPSYTAATSRYPRAE 13
           +VG GAP Y AA   Y  AE
Sbjct: 44  RVGAGAPVYLAAVLEYLAAE 63


>Z83245-6|CAB05836.1|  127|Caenorhabditis elegans Hypothetical
           protein ZK131.6 protein.
          Length = 127

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 72  KVGVGAPSYTAATSRYPRAE 13
           +VG GAP Y AA   Y  AE
Sbjct: 44  RVGAGAPVYLAAVLEYLAAE 63


>Z82271-4|CAB05212.1|  127|Caenorhabditis elegans Hypothetical
           protein F54E12.5 protein.
          Length = 127

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 72  KVGVGAPSYTAATSRYPRAE 13
           +VG GAP Y AA   Y  AE
Sbjct: 44  RVGAGAPVYLAAVLEYLAAE 63


>Z81495-2|CAB04056.1|  127|Caenorhabditis elegans Hypothetical
           protein F08G2.2 protein.
          Length = 127

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 72  KVGVGAPSYTAATSRYPRAE 13
           +VG GAP Y AA   Y  AE
Sbjct: 44  RVGAGAPVYLAAVLEYLAAE 63


>Z81128-6|CAB03399.1|  127|Caenorhabditis elegans Hypothetical
           protein T23D8.6 protein.
          Length = 127

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 72  KVGVGAPSYTAATSRYPRAE 13
           +VG GAP Y AA   Y  AE
Sbjct: 44  RVGAGAPVYLAAVLEYLAAE 63


>Z79695-2|CAB01971.2| 1008|Caenorhabditis elegans Hypothetical
           protein F27D4.6 protein.
          Length = 1008

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 62  TPTFTVALDLDGNTYIGKASSKREAR 139
           TPT  V++ L GNT++  AS K   +
Sbjct: 739 TPTRIVSMSLLGNTFLHIASEKHREK 764


>Z73102-8|CAA97414.1|  127|Caenorhabditis elegans Hypothetical
           protein B0035.7 protein.
          Length = 127

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 72  KVGVGAPSYTAATSRYPRAE 13
           +VG GAP Y AA   Y  AE
Sbjct: 44  RVGAGAPVYLAAVLEYLAAE 63


>Z70750-11|CAA94747.1|  127|Caenorhabditis elegans Hypothetical
           protein C50F4.13 protein.
          Length = 127

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 72  KVGVGAPSYTAATSRYPRAE 13
           +VG GAP Y AA   Y  AE
Sbjct: 44  RVGAGAPVYLAAVLEYLAAE 63


>X15633-1|CAA33641.1|  127|Caenorhabditis elegans histone protein
           protein.
          Length = 127

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 72  KVGVGAPSYTAATSRYPRAE 13
           +VG GAP Y AA   Y  AE
Sbjct: 44  RVGAGAPVYLAAVLEYLAAE 63


>U64845-8|AAC48024.1|  127|Caenorhabditis elegans Histone protein 7
           protein.
          Length = 127

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 72  KVGVGAPSYTAATSRYPRAE 13
           +VG GAP Y AA   Y  AE
Sbjct: 44  RVGAGAPVYLAAVLEYLAAE 63


>U64843-8|AAF98222.1|  127|Caenorhabditis elegans Histone protein 19
           protein.
          Length = 127

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 72  KVGVGAPSYTAATSRYPRAE 13
           +VG GAP Y AA   Y  AE
Sbjct: 44  RVGAGAPVYLAAVLEYLAAE 63


>U64843-5|AAF98219.1|  127|Caenorhabditis elegans Histone protein 21
           protein.
          Length = 127

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 72  KVGVGAPSYTAATSRYPRAE 13
           +VG GAP Y AA   Y  AE
Sbjct: 44  RVGAGAPVYLAAVLEYLAAE 63


>U58750-7|AAB00647.1|  127|Caenorhabditis elegans Histone protein 61
           protein.
          Length = 127

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 72  KVGVGAPSYTAATSRYPRAE 13
           +VG GAP Y AA   Y  AE
Sbjct: 44  RVGAGAPVYLAAVLEYLAAE 63


>U40934-9|AAA81686.1|  127|Caenorhabditis elegans Histone protein 30
           protein.
          Length = 127

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 72  KVGVGAPSYTAATSRYPRAE 13
           +VG GAP Y AA   Y  AE
Sbjct: 44  RVGAGAPVYLAAVLEYLAAE 63


>AF067946-3|AAC17682.1|  288|Caenorhabditis elegans Hypothetical
           protein W02G9.4 protein.
          Length = 288

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +2

Query: 5   ALNSARGYRDVAAVYDGAPT 64
           A N+  GY DV +VYDGA T
Sbjct: 173 AFNTEDGY-DVVSVYDGANT 191


>AF047656-4|AAC05100.1|  127|Caenorhabditis elegans Histone protein
           33 protein.
          Length = 127

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 72  KVGVGAPSYTAATSRYPRAE 13
           +VG GAP Y AA   Y  AE
Sbjct: 44  RVGAGAPVYLAAVLEYLAAE 63


>AC024696-8|AAK84512.1|  127|Caenorhabditis elegans Histone protein
           53 protein.
          Length = 127

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 72  KVGVGAPSYTAATSRYPRAE 13
           +VG GAP Y AA   Y  AE
Sbjct: 44  RVGAGAPVYLAAVLEYLAAE 63


>AC024696-5|AAK84506.1|  127|Caenorhabditis elegans Histone protein
           51 protein.
          Length = 127

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 72  KVGVGAPSYTAATSRYPRAE 13
           +VG GAP Y AA   Y  AE
Sbjct: 44  RVGAGAPVYLAAVLEYLAAE 63


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,799,807
Number of Sequences: 27780
Number of extensions: 55852
Number of successful extensions: 228
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 228
length of database: 12,740,198
effective HSP length: 50
effective length of database: 11,351,198
effective search space used: 227023960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -