Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_H09
         (213 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    37   3e-05
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               22   0.95 
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   0.95 
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   1.3  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   1.3  
AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding pr...    21   1.7  
AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.           20   3.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    20   3.8  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                19   5.1  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       19   6.7  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    19   6.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    19   6.7  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          19   8.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      19   8.9  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 36.7 bits (81), Expect = 3e-05
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = +2

Query: 5   ALNSARGYRDVAAVYDGAPT--PTFTVALDLDGNTYIGKASSKREARKEAGRVA 160
           ALN  +       V    PT  P FT+A+ +DG TY GK  +K+ A+  A  +A
Sbjct: 40  ALNELKSGAVYKVVDQTGPTHAPIFTIAVQIDGQTYEGKGRTKKMAKHAAAELA 93



 Score = 29.9 bits (64), Expect = 0.004
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +2

Query: 50  DGAPTPTFTVALDLDGNTYIGKASSKREARKEAGRVACYELFKV 181
           +G     FT+++ +DG T+ G   SK+ A+  A + A  +L  V
Sbjct: 175 NGESYAKFTISVTIDGETFEGTGPSKKLAKAAASKAALAKLRNV 218


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 21.8 bits (44), Expect = 0.95
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +2

Query: 104 YIGKASSKREARKEAGRVACYELFKVEFG 190
           Y G+A  K++ RKE+ +V+   L K++ G
Sbjct: 19  YFGEADIKKDCRKES-KVSWAALKKMKAG 46


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 0.95
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 154 APGLLTRLALTRRFPDVGVAVEVERDSEG 68
           A  +L   AL  +  D G++ E+E  +EG
Sbjct: 763 ARNVLVNAALVCKIADFGLSREIESATEG 791



 Score = 20.6 bits (41), Expect = 2.2
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 112 PDVGVAVEVERDSEGGGGRAVI 47
           P VGVA      + GGG R+ +
Sbjct: 588 PAVGVAAASAGGAGGGGARSYV 609


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.4 bits (43), Expect = 1.3
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +2

Query: 23  GYRDVAAVYDGAPTPTFTVALDLD 94
           GY  +AA+  G+  P  ++ +D+D
Sbjct: 40  GYAKLAAIKSGSYIPGASLPIDVD 63


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.4 bits (43), Expect = 1.3
 Identities = 7/16 (43%), Positives = 7/16 (43%)
 Frame = +1

Query: 61  HPHLHCRARPRRQHLH 108
           H H H  A P   H H
Sbjct: 421 HGHSHIHATPHHHHSH 436


>AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding
           protein protein.
          Length = 132

 Score = 21.0 bits (42), Expect = 1.7
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -3

Query: 199 RVWSEFNFEEFVAGDAPGLLTR 134
           +++S  NF++F+     G++TR
Sbjct: 10  KLYSSENFDDFMKALGVGIMTR 31


>AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.
          Length = 126

 Score = 19.8 bits (39), Expect = 3.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +2

Query: 89  LDGNTYIGKASSKREARKEAGRVACY 166
           L GN YI  + + R  R + G+V  +
Sbjct: 63  LAGNRYIYLSGTDRVIRAKLGKVGVH 88


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 19.8 bits (39), Expect = 3.8
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 53   GAPTPTFTVALDLDGNTYIGKAS 121
            G  +  F V+L LDG   + KAS
Sbjct: 1565 GLTSDKFDVSLALDGERVMLKAS 1587


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 63  VGAPSYTAAT 34
           +G PSYT AT
Sbjct: 220 MGRPSYTTAT 229


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -3

Query: 64  GGRAVIHRRDVAVPSCRI 11
           GG +V+H+R      C I
Sbjct: 309 GGTSVMHQRGKLSAGCHI 326


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +2

Query: 53  GAPTPTFTVALD 88
           G PTP  T ALD
Sbjct: 447 GNPTPQVTWALD 458


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +2

Query: 53  GAPTPTFTVALD 88
           G PTP  T ALD
Sbjct: 447 GNPTPQVTWALD 458


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 18.6 bits (36), Expect = 8.9
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -3

Query: 202 TRVWSEFNFEE 170
           T VW+ FN  E
Sbjct: 125 TAVWARFNVNE 135


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 18.6 bits (36), Expect = 8.9
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -3

Query: 202 TRVWSEFNFEE 170
           T VW+ FN  E
Sbjct: 125 TAVWARFNVNE 135


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,741
Number of Sequences: 438
Number of extensions: 575
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  3165825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)