Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_H08
         (394 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   1.7  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   3.8  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   6.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   6.7  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    20   8.8  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    20   8.8  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +1

Query: 40  C*RVRELDSRSDSTNRIS*ASTMPFKPADN 129
           C R R+LDS SDS   I   +  P KPA +
Sbjct: 568 CPRFRKLDSPSDS--GIESGTEKPDKPASS 595


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 187 HRQLAPRPRKLISRISG 137
           H QL P PR    ++SG
Sbjct: 378 HSQLCPTPRSTHLKVSG 394


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 322 HSLLVQIYVRGTLCRTVH 269
           HSL     + G  CRT+H
Sbjct: 196 HSLEFSDQIHGYRCRTMH 213


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 322 HSLLVQIYVRGTLCRTVH 269
           HSL     + G  CRT+H
Sbjct: 196 HSLEFSDQIHGYRCRTMH 213


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 9/36 (25%), Positives = 13/36 (36%)
 Frame = -1

Query: 346 GSQRHRRSHSLLVQIYVRGTLCRTVHLRVLSSWSNP 239
           G  +  R H+          +C  +HLR    W  P
Sbjct: 196 GVSKPTRDHNAFEYAMAVMKMCDILHLRHTKIWLRP 231


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +1

Query: 211 FKCGMCQKLLDSTN 252
           ++C +CQK  D  N
Sbjct: 62  YQCLLCQKAFDQKN 75


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,910
Number of Sequences: 438
Number of extensions: 2226
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9638226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)