Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_H06
(186 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC002651-1|AAH02651.1| 348|Homo sapiens arsA arsenite transport... 29 2.7
AY304483-1|AAP45050.1| 348|Homo sapiens arsA arsenite transport... 29 2.7
AK223363-1|BAD97083.1| 348|Homo sapiens arsA arsenite transport... 29 2.7
AF047469-1|AAC03551.1| 348|Homo sapiens arsenite translocating ... 29 2.7
D87328-1|BAA13332.1| 726|Homo sapiens HCS protein. 28 4.6
D23672-1|BAA04902.1| 726|Homo sapiens holocarboxylase synthetas... 28 4.6
BC060787-1|AAH60787.1| 726|Homo sapiens holocarboxylase synthet... 28 4.6
AP001727-1|BAA95511.1| 484|Homo sapiens holocarboxylase synthet... 28 4.6
AP000697-2|BAA89434.1| 726|Homo sapiens holocarboxylase synthet... 28 4.6
AB063285-1|BAB68550.1| 726|Homo sapiens holocarboxylase synthet... 28 4.6
>BC002651-1|AAH02651.1| 348|Homo sapiens arsA arsenite transporter,
ATP-binding, homolog 1 (bacterial) protein.
Length = 348
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2
Query: 116 EDTNELPSLEPSLRNVIEQTSLR 184
ED ++ LEP+L N+IEQ SL+
Sbjct: 16 EDAPDVEPLEPTLSNIIEQRSLK 38
>AY304483-1|AAP45050.1| 348|Homo sapiens arsA arsenite transporter,
ATP-binding, homolog 1 (bacterial) protein.
Length = 348
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2
Query: 116 EDTNELPSLEPSLRNVIEQTSLR 184
ED ++ LEP+L N+IEQ SL+
Sbjct: 16 EDAPDVEPLEPTLSNIIEQRSLK 38
>AK223363-1|BAD97083.1| 348|Homo sapiens arsA arsenite transporter,
ATP-binding, homolog 1 variant protein.
Length = 348
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2
Query: 116 EDTNELPSLEPSLRNVIEQTSLR 184
ED ++ LEP+L N+IEQ SL+
Sbjct: 16 EDAPDVEPLEPTLSNIIEQRSLK 38
>AF047469-1|AAC03551.1| 348|Homo sapiens arsenite translocating
ATPase protein.
Length = 348
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2
Query: 116 EDTNELPSLEPSLRNVIEQTSLR 184
ED ++ LEP+L N+IEQ SL+
Sbjct: 16 EDAPDVEPLEPTLSNIIEQRSLK 38
>D87328-1|BAA13332.1| 726|Homo sapiens HCS protein.
Length = 726
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 29 LHYINVHECLRLRLFTIKFC*EIKFVITMEDTNELP-SLEPSLRNVIEQTS 178
LH + HECL L TI+ +KF + E+ +LP SL +V ++TS
Sbjct: 101 LHLSSCHECLELENSTIE---SVKFA-SAENIPDLPYDYSSSLESVADETS 147
>D23672-1|BAA04902.1| 726|Homo sapiens holocarboxylase synthetase
protein.
Length = 726
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 29 LHYINVHECLRLRLFTIKFC*EIKFVITMEDTNELP-SLEPSLRNVIEQTS 178
LH + HECL L TI+ +KF + E+ +LP SL +V ++TS
Sbjct: 101 LHLSSCHECLELENSTIE---SVKFA-SAENIPDLPYDYSSSLESVADETS 147
>BC060787-1|AAH60787.1| 726|Homo sapiens holocarboxylase synthetase
(biotin-(proprionyl-Coenzyme A-carboxylase (ATP-hydr
protein.
Length = 726
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 29 LHYINVHECLRLRLFTIKFC*EIKFVITMEDTNELP-SLEPSLRNVIEQTS 178
LH + HECL L TI+ +KF + E+ +LP SL +V ++TS
Sbjct: 101 LHLSSCHECLELENSTIE---SVKFA-SAENIPDLPYDYSSSLESVADETS 147
>AP001727-1|BAA95511.1| 484|Homo sapiens holocarboxylase synthetase
protein.
Length = 484
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 29 LHYINVHECLRLRLFTIKFC*EIKFVITMEDTNELP-SLEPSLRNVIEQTS 178
LH + HECL L TI+ +KF + E+ +LP SL +V ++TS
Sbjct: 101 LHLSSCHECLELENSTIE---SVKFA-SAENIPDLPYDYSSSLESVADETS 147
>AP000697-2|BAA89434.1| 726|Homo sapiens holocarboxylase synthetase
(biotin-[proprionyl-Coenzyme A-carboxylase (ATP-hydr
protein.
Length = 726
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 29 LHYINVHECLRLRLFTIKFC*EIKFVITMEDTNELP-SLEPSLRNVIEQTS 178
LH + HECL L TI+ +KF + E+ +LP SL +V ++TS
Sbjct: 101 LHLSSCHECLELENSTIE---SVKFA-SAENIPDLPYDYSSSLESVADETS 147
>AB063285-1|BAB68550.1| 726|Homo sapiens holocarboxylase synthetase
protein.
Length = 726
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 29 LHYINVHECLRLRLFTIKFC*EIKFVITMEDTNELP-SLEPSLRNVIEQTS 178
LH + HECL L TI+ +KF + E+ +LP SL +V ++TS
Sbjct: 101 LHLSSCHECLELENSTIE---SVKFA-SAENIPDLPYDYSSSLESVADETS 147
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,214,214
Number of Sequences: 237096
Number of extensions: 255334
Number of successful extensions: 348
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 348
length of database: 76,859,062
effective HSP length: 41
effective length of database: 67,138,126
effective search space used: 1342762520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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