Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_H05
         (242 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK093494-1|BAC04184.1|  476|Homo sapiens protein ( Homo sapiens ...    28   6.3  
AL133227-3|CAI40553.1|  196|Homo sapiens solute carrier family 3...    27   8.4  

>AK093494-1|BAC04184.1|  476|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36175 fis, clone TESTI2026453, weakly similar to
           PUTATIVE SERINE/THREONINE-PROTEIN KINASE PKWA (EC
           2.7.1.-). ).
          Length = 476

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 12/23 (52%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = -3

Query: 174 FEIKYKGEAE-HCCAVLCCAVLH 109
           FE+KYK     HC  VL CA  H
Sbjct: 227 FELKYKSTLSGHCAPVLACAFSH 249


>AL133227-3|CAI40553.1|  196|Homo sapiens solute carrier family 35,
           member C2 protein.
          Length = 196

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = +2

Query: 74  CREVRTARA--ADPCSTAQHSTAQQCSASPLYL-ISKC 178
           CR + +A    + PCST  HS +   S S LYL +S C
Sbjct: 142 CRRLNSASRIPSTPCSTCSHSCSWGSSLSLLYLKVSIC 179


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,827,919
Number of Sequences: 237096
Number of extensions: 430125
Number of successful extensions: 1087
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1087
length of database: 76,859,062
effective HSP length: 58
effective length of database: 63,107,494
effective search space used: 1388364868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)