Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_H05
         (242 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              25   0.10 
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   0.54 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   0.54 
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    21   1.6  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    21   1.6  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    21   1.6  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    21   1.6  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    21   1.6  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    21   1.6  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    21   1.6  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    20   3.8  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    19   6.7  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    19   6.7  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    19   6.7  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    19   6.7  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    19   6.7  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           19   6.7  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    19   6.7  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    19   6.7  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           19   6.7  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    19   8.8  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    19   8.8  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 25.4 bits (53), Expect = 0.10
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +2

Query: 89  TARAADPCSTAQHSTAQQCSASPLYLISKC 178
           ++R+ DPC++      ++C  SP   I+ C
Sbjct: 75  SSRSIDPCASKYCGIGKECELSPNSTIAVC 104


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.0 bits (47), Expect = 0.54
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 58  CSSKSVPRGKNGARCGPV 111
           C+ +S PR K  A  GP+
Sbjct: 53  CADRSAPRVKKTASAGPI 70


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.0 bits (47), Expect = 0.54
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 58  CSSKSVPRGKNGARCGPV 111
           C+ +S PR K  A  GP+
Sbjct: 143 CADRSAPRVKKTASAGPI 160


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 1.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 207 NNEYRDKNRAHFEIKYKGE 151
           N EYR+KNR + ++  + E
Sbjct: 9   NREYREKNRRYEKLHNEKE 27


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 1.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 207 NNEYRDKNRAHFEIKYKGE 151
           N EYR+KNR + ++  + E
Sbjct: 9   NREYREKNRRYEKLHNEKE 27


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 1.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 207 NNEYRDKNRAHFEIKYKGE 151
           N EYR+KNR + ++  + E
Sbjct: 9   NREYREKNRRYEKLHNEKE 27


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 1.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 207 NNEYRDKNRAHFEIKYKGE 151
           N EYR+KNR + ++  + E
Sbjct: 9   NREYREKNRRYEKLHNEKE 27


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 1.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 207 NNEYRDKNRAHFEIKYKGE 151
           N EYR+KNR + ++  + E
Sbjct: 9   NREYREKNRRYEKLHNEKE 27


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 1.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 207 NNEYRDKNRAHFEIKYKGE 151
           N EYR+KNR + ++  + E
Sbjct: 9   NREYREKNRRYEKLHNEKE 27


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 1.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 207 NNEYRDKNRAHFEIKYKGE 151
           N EYR+KNR + ++  + E
Sbjct: 9   NREYREKNRRYEKLHNEKE 27


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 20.2 bits (40), Expect = 3.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -3

Query: 198 YRDKNRAHFEIKYKG 154
           YR K R   E+K KG
Sbjct: 574 YRVKERGEIEVKGKG 588


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 19.4 bits (38), Expect = 6.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 207 NNEYRDKNRAHFEIKYKGE 151
           N EYR+K+R + ++  + E
Sbjct: 9   NREYREKDRRYEKLHNEKE 27


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 19.4 bits (38), Expect = 6.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 207 NNEYRDKNRAHFEIKYKGE 151
           N EYR+K+R + ++  + E
Sbjct: 9   NREYREKDRRYEKLHNEKE 27


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 19.4 bits (38), Expect = 6.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 207 NNEYRDKNRAHFEIKYKGE 151
           N EYR+K+R + ++  + E
Sbjct: 9   NREYREKDRRYEKLHNEKE 27


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 19.4 bits (38), Expect = 6.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 207 NNEYRDKNRAHFEIKYKGE 151
           N EYR+K+R + ++  + E
Sbjct: 9   NREYREKDRRYEKLHNEKE 27


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 19.4 bits (38), Expect = 6.7
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 50  RNVVVVSRCREVRTARA 100
           RNV  + RC   R ARA
Sbjct: 264 RNVKEMIRCLRYRPARA 280


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 19.4 bits (38), Expect = 6.7
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 50  RNVVVVSRCREVRTARA 100
           RNV  + RC   R ARA
Sbjct: 135 RNVKEMIRCLRYRPARA 151


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 19.4 bits (38), Expect = 6.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 207 NNEYRDKNRAHFEIKYKGE 151
           N EYR+K+R + ++  + E
Sbjct: 242 NREYREKDRRYEKLHNEKE 260


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 19.4 bits (38), Expect = 6.7
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +2

Query: 155 PLYLISKCA 181
           P YL SKCA
Sbjct: 159 PAYLASKCA 167


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 19.4 bits (38), Expect = 6.7
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 50  RNVVVVSRCREVRTARA 100
           RNV  + RC   R ARA
Sbjct: 264 RNVKEMIRCLRYRPARA 280


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 19.0 bits (37), Expect = 8.8
 Identities = 11/44 (25%), Positives = 15/44 (34%)
 Frame = -3

Query: 138 CAVLCCAVLHGSAARAVLTSRHXXXXXXXXXXXXXTKRPEPSCR 7
           C + C A  H  + RAV                  TK P+P  +
Sbjct: 213 CRLYCYAQKHVKSIRAVTKLPDTSMAKSFVRKVHATKPPKPQTK 256


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 19.0 bits (37), Expect = 8.8
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 207 NNEYRDKNRAHFE 169
           NN+ + KN+AH +
Sbjct: 425 NNQNKYKNQAHLD 437


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,884
Number of Sequences: 438
Number of extensions: 806
Number of successful extensions: 22
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4149981
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)