Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_H03
(232 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 21 2.6
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 21 2.6
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 20 3.5
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 20 3.5
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 20 3.5
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 20 3.5
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 20 3.5
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 20 3.5
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 20 3.5
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 20 3.5
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 20 3.5
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 20 4.6
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 19 6.1
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 19 6.1
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 19 8.0
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 19 8.0
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 19 8.0
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 20.6 bits (41), Expect = 2.6
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +1
Query: 97 SLLNLSCKQIKDFVNGHNYRR 159
S L+ SC ++ N +NY++
Sbjct: 305 SSLSNSCNYSNNYYNNNNYKK 325
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 20.6 bits (41), Expect = 2.6
Identities = 10/37 (27%), Positives = 15/37 (40%)
Frame = +1
Query: 43 RALLILAMVVCIGHVHSKSLLNLSCKQIKDFVNGHNY 153
RA + + C G V + CK + F +G Y
Sbjct: 399 RAFVRILCACCPGRVRRRYQPAFRCKPSQRFASGRYY 435
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 20.2 bits (40), Expect = 3.5
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +2
Query: 131 ISSTDTIIGDNYWLRVRYQDTLLQLK*NIWCGMK 232
+ + I+ N WL++ + D LQ + + G+K
Sbjct: 26 VDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVK 59
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 20.2 bits (40), Expect = 3.5
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +2
Query: 131 ISSTDTIIGDNYWLRVRYQDTLLQLK*NIWCGMK 232
+ + I+ N WL++ + D LQ + + G+K
Sbjct: 26 VDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVK 59
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 20.2 bits (40), Expect = 3.5
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +2
Query: 131 ISSTDTIIGDNYWLRVRYQDTLLQLK*NIWCGMK 232
+ + I+ N WL++ + D LQ + + G+K
Sbjct: 26 VDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVK 59
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 20.2 bits (40), Expect = 3.5
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +2
Query: 131 ISSTDTIIGDNYWLRVRYQDTLLQLK*NIWCGMK 232
+ + I+ N WL++ + D LQ + + G+K
Sbjct: 26 VDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVK 59
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 20.2 bits (40), Expect = 3.5
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +2
Query: 131 ISSTDTIIGDNYWLRVRYQDTLLQLK*NIWCGMK 232
+ + I+ N WL++ + D LQ + + G+K
Sbjct: 26 VDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVK 59
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 20.2 bits (40), Expect = 3.5
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +2
Query: 131 ISSTDTIIGDNYWLRVRYQDTLLQLK*NIWCGMK 232
+ + I+ N WL++ + D LQ + + G+K
Sbjct: 26 VDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVK 59
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 20.2 bits (40), Expect = 3.5
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = -3
Query: 110 KFSRDLLWTCPIHTT 66
+F RDL+WT ++ +
Sbjct: 91 QFVRDLIWTPTVYVS 105
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 20.2 bits (40), Expect = 3.5
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +2
Query: 131 ISSTDTIIGDNYWLRVRYQDTLLQLK*NIWCGMK 232
+ + I+ N WL++ + D LQ + + G+K
Sbjct: 94 VDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVK 127
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 20.2 bits (40), Expect = 3.5
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +2
Query: 131 ISSTDTIIGDNYWLRVRYQDTLLQLK*NIWCGMK 232
+ + I+ N WL++ + D LQ + + G+K
Sbjct: 94 VDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVK 127
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 19.8 bits (39), Expect = 4.6
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +2
Query: 143 DTIIGDNYWLRVRYQDTLLQ 202
D I+ N WL +QD Q
Sbjct: 64 DQILTTNVWLEHEWQDHKFQ 83
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 19.4 bits (38), Expect = 6.1
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -1
Query: 223 TPYISFQLQQG 191
+PY +FQL +G
Sbjct: 1695 SPYATFQLSEG 1705
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 19.4 bits (38), Expect = 6.1
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -1
Query: 223 TPYISFQLQQG 191
+PY +FQL +G
Sbjct: 1691 SPYATFQLSEG 1701
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 19.0 bits (37), Expect = 8.0
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 22 YN*TMAVRALLILAMVVCIGHV 87
Y+ ++ V A IL +C GHV
Sbjct: 770 YDSSVDVYAFGILFWYLCAGHV 791
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 19.0 bits (37), Expect = 8.0
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 22 YN*TMAVRALLILAMVVCIGHV 87
Y+ ++ V A IL +C GHV
Sbjct: 808 YDSSVDVYAFGILFWYLCAGHV 829
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 19.0 bits (37), Expect = 8.0
Identities = 6/20 (30%), Positives = 9/20 (45%)
Frame = +2
Query: 2 HEGSW*HTTEQWPYARFLFW 61
H + H +W FL+W
Sbjct: 320 HRNADTHEMSEWVKVVFLYW 339
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,499
Number of Sequences: 438
Number of extensions: 1222
Number of successful extensions: 21
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used: 3785850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
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