Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_H02
(337 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U91985-1|AAC51249.1| 331|Homo sapiens DNA fragmentation factor-... 40 0.003
BT006980-1|AAP35626.1| 331|Homo sapiens DNA fragmentation facto... 40 0.003
BC007721-1|AAH07721.1| 331|Homo sapiens DNA fragmentation facto... 40 0.003
BC007112-1|AAH07112.1| 331|Homo sapiens DNA fragmentation facto... 40 0.003
BC000037-1|AAH00037.1| 331|Homo sapiens DNA fragmentation facto... 40 0.003
AL354956-3|CAI19197.1| 268|Homo sapiens DNA fragmentation facto... 40 0.003
AL354956-2|CAI19196.1| 331|Homo sapiens DNA fragmentation facto... 40 0.003
AK222546-1|BAD96266.1| 331|Homo sapiens DNA fragmentation facto... 40 0.003
AF103799-1|AAF02419.1| 268|Homo sapiens unknown protein. 40 0.003
AF087573-1|AAD32953.1| 268|Homo sapiens DNA fragmentation facto... 40 0.003
AL354873-1|CAI10906.1| 651|Homo sapiens actin binding LIM prote... 31 1.2
AL133384-4|CAI40131.1| 651|Homo sapiens actin binding LIM prote... 31 1.2
BC112238-1|AAI12239.1| 655|Homo sapiens sphingomyelin phosphodi... 28 6.2
AJ250460-1|CAB92964.1| 655|Homo sapiens neutral sphingomyelinas... 28 6.2
DQ424899-1|ABD83664.1| 638|Homo sapiens sphingomyelin phosphodi... 28 8.2
>U91985-1|AAC51249.1| 331|Homo sapiens DNA fragmentation factor-45
protein.
Length = 331
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/66 (37%), Positives = 37/66 (56%)
Frame = +3
Query: 138 AKKKIGVAAENLEELIEKSRTKFWFNASCAECRLFVAEDGTQVDDNDYLATLDYHMTLFI 317
++++ GVAA LE+L K+ + S L +AEDGT VDD+DY L + T F+
Sbjct: 28 SREQHGVAASCLEDLRSKACDILAIDKSLTPVTLVLAEDGTIVDDDDYFLCLPSN-TKFV 86
Query: 318 *LKKSE 335
L +E
Sbjct: 87 ALASNE 92
>BT006980-1|AAP35626.1| 331|Homo sapiens DNA fragmentation factor,
45kDa, alpha polypeptide protein.
Length = 331
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/66 (37%), Positives = 37/66 (56%)
Frame = +3
Query: 138 AKKKIGVAAENLEELIEKSRTKFWFNASCAECRLFVAEDGTQVDDNDYLATLDYHMTLFI 317
++++ GVAA LE+L K+ + S L +AEDGT VDD+DY L + T F+
Sbjct: 28 SREQHGVAASCLEDLRSKACDILAIDKSLTPVTLVLAEDGTIVDDDDYFLCLPSN-TKFV 86
Query: 318 *LKKSE 335
L +E
Sbjct: 87 ALASNE 92
>BC007721-1|AAH07721.1| 331|Homo sapiens DNA fragmentation factor,
45kDa, alpha polypeptide protein.
Length = 331
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/66 (37%), Positives = 37/66 (56%)
Frame = +3
Query: 138 AKKKIGVAAENLEELIEKSRTKFWFNASCAECRLFVAEDGTQVDDNDYLATLDYHMTLFI 317
++++ GVAA LE+L K+ + S L +AEDGT VDD+DY L + T F+
Sbjct: 28 SREQHGVAASCLEDLRSKACDILAIDKSLTPVTLVLAEDGTIVDDDDYFLCLPSN-TKFV 86
Query: 318 *LKKSE 335
L +E
Sbjct: 87 ALASNE 92
>BC007112-1|AAH07112.1| 331|Homo sapiens DNA fragmentation factor,
45kDa, alpha polypeptide protein.
Length = 331
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/66 (37%), Positives = 37/66 (56%)
Frame = +3
Query: 138 AKKKIGVAAENLEELIEKSRTKFWFNASCAECRLFVAEDGTQVDDNDYLATLDYHMTLFI 317
++++ GVAA LE+L K+ + S L +AEDGT VDD+DY L + T F+
Sbjct: 28 SREQHGVAASCLEDLRSKACDILAIDKSLTPVTLVLAEDGTIVDDDDYFLCLPSN-TKFV 86
Query: 318 *LKKSE 335
L +E
Sbjct: 87 ALASNE 92
>BC000037-1|AAH00037.1| 331|Homo sapiens DNA fragmentation factor,
45kDa, alpha polypeptide protein.
Length = 331
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/66 (37%), Positives = 37/66 (56%)
Frame = +3
Query: 138 AKKKIGVAAENLEELIEKSRTKFWFNASCAECRLFVAEDGTQVDDNDYLATLDYHMTLFI 317
++++ GVAA LE+L K+ + S L +AEDGT VDD+DY L + T F+
Sbjct: 28 SREQHGVAASCLEDLRSKACDILAIDKSLTPVTLVLAEDGTIVDDDDYFLCLPSN-TKFV 86
Query: 318 *LKKSE 335
L +E
Sbjct: 87 ALASNE 92
>AL354956-3|CAI19197.1| 268|Homo sapiens DNA fragmentation factor,
45kDa, alpha polypeptide protein.
Length = 268
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/66 (37%), Positives = 37/66 (56%)
Frame = +3
Query: 138 AKKKIGVAAENLEELIEKSRTKFWFNASCAECRLFVAEDGTQVDDNDYLATLDYHMTLFI 317
++++ GVAA LE+L K+ + S L +AEDGT VDD+DY L + T F+
Sbjct: 28 SREQHGVAASCLEDLRSKACDILAIDKSLTPVTLVLAEDGTIVDDDDYFLCLPSN-TKFV 86
Query: 318 *LKKSE 335
L +E
Sbjct: 87 ALASNE 92
>AL354956-2|CAI19196.1| 331|Homo sapiens DNA fragmentation factor,
45kDa, alpha polypeptide protein.
Length = 331
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/66 (37%), Positives = 37/66 (56%)
Frame = +3
Query: 138 AKKKIGVAAENLEELIEKSRTKFWFNASCAECRLFVAEDGTQVDDNDYLATLDYHMTLFI 317
++++ GVAA LE+L K+ + S L +AEDGT VDD+DY L + T F+
Sbjct: 28 SREQHGVAASCLEDLRSKACDILAIDKSLTPVTLVLAEDGTIVDDDDYFLCLPSN-TKFV 86
Query: 318 *LKKSE 335
L +E
Sbjct: 87 ALASNE 92
>AK222546-1|BAD96266.1| 331|Homo sapiens DNA fragmentation factor,
45kDa, alpha polypeptide isoform 1 variant protein.
Length = 331
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/66 (37%), Positives = 37/66 (56%)
Frame = +3
Query: 138 AKKKIGVAAENLEELIEKSRTKFWFNASCAECRLFVAEDGTQVDDNDYLATLDYHMTLFI 317
++++ GVAA LE+L K+ + S L +AEDGT VDD+DY L + T F+
Sbjct: 28 SREQHGVAASCLEDLRSKACDILAIDKSLTPVTLVLAEDGTIVDDDDYFLCLPSN-TKFV 86
Query: 318 *LKKSE 335
L +E
Sbjct: 87 ALASNE 92
>AF103799-1|AAF02419.1| 268|Homo sapiens unknown protein.
Length = 268
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/66 (37%), Positives = 37/66 (56%)
Frame = +3
Query: 138 AKKKIGVAAENLEELIEKSRTKFWFNASCAECRLFVAEDGTQVDDNDYLATLDYHMTLFI 317
++++ GVAA LE+L K+ + S L +AEDGT VDD+DY L + T F+
Sbjct: 28 SREQHGVAASCLEDLRSKACDILAIDKSLTPVTLVLAEDGTIVDDDDYFLCLPSN-TKFV 86
Query: 318 *LKKSE 335
L +E
Sbjct: 87 ALASNE 92
>AF087573-1|AAD32953.1| 268|Homo sapiens DNA fragmentation factor
DFF35 protein.
Length = 268
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/66 (37%), Positives = 37/66 (56%)
Frame = +3
Query: 138 AKKKIGVAAENLEELIEKSRTKFWFNASCAECRLFVAEDGTQVDDNDYLATLDYHMTLFI 317
++++ GVAA LE+L K+ + S L +AEDGT VDD+DY L + T F+
Sbjct: 28 SREQHGVAASCLEDLRSKACDILAIDKSLTPVTLVLAEDGTIVDDDDYFLCLPSN-TKFV 86
Query: 318 *LKKSE 335
L +E
Sbjct: 87 ALASNE 92
>AL354873-1|CAI10906.1| 651|Homo sapiens actin binding LIM protein
1 protein.
Length = 651
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 219 SCAECRLFVAEDGTQVDDNDYLATLDYHMTLF 314
+C C +A+ G + + +YL TLDYH F
Sbjct: 59 TCKVCGCDLAQGGFFIKNGEYLCTLDYHPNCF 90
>AL133384-4|CAI40131.1| 651|Homo sapiens actin binding LIM protein
1 protein.
Length = 651
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 219 SCAECRLFVAEDGTQVDDNDYLATLDYHMTLF 314
+C C +A+ G + + +YL TLDYH F
Sbjct: 59 TCKVCGCDLAQGGFFIKNGEYLCTLDYHPNCF 90
>BC112238-1|AAI12239.1| 655|Homo sapiens sphingomyelin
phosphodiesterase 3, neutral membrane protein.
Length = 655
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 223 QLALNQNFVRDFSINSSKFSAATPIFFFAFD-ICNFISF 110
QL L Q+++ DF ++S SAA P AFD +C +F
Sbjct: 475 QLDLLQDWLADFRKSTSSSSAANPEELVAFDVVCGDFNF 513
>AJ250460-1|CAB92964.1| 655|Homo sapiens neutral sphingomyelinase
II protein.
Length = 655
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 223 QLALNQNFVRDFSINSSKFSAATPIFFFAFD-ICNFISF 110
QL L Q+++ DF ++S SAA P AFD +C +F
Sbjct: 475 QLDLLQDWLADFRKSTSSSSAANPEELVAFDVVCGDFNF 513
>DQ424899-1|ABD83664.1| 638|Homo sapiens sphingomyelin
phosphodiesterase 3 protein.
Length = 638
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 223 QLALNQNFVRDFSINSSKFSAATPIFFFAFD-ICNFISF 110
QL L Q+++ DF ++S SAA P AFD +C +F
Sbjct: 475 QLDLLQDWLADFRKSTSPSSAANPEELVAFDVVCGDFNF 513
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,199,752
Number of Sequences: 237096
Number of extensions: 771870
Number of successful extensions: 1364
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1364
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1794632842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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