Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_H02
         (337 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00043-11|AAN65290.1|  641|Caenorhabditis elegans Hypothetical p...    29   0.83 
U00043-10|AAC77505.1|  779|Caenorhabditis elegans Hypothetical p...    29   0.83 
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr...    28   1.4  
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr...    28   1.4  
Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical pr...    28   1.9  
Z19157-4|CAA79570.1| 1474|Caenorhabditis elegans Hypothetical pr...    27   2.5  
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr...    27   2.5  
AC024799-7|AAW88388.1|  295|Caenorhabditis elegans Hypothetical ...    27   2.5  
Z82260-12|CAB05141.2|  129|Caenorhabditis elegans Hypothetical p...    27   3.3  
Z81463-1|CAB03850.1|  342|Caenorhabditis elegans Hypothetical pr...    26   7.7  
U40409-8|AAA81389.1|  156|Caenorhabditis elegans Hypothetical pr...    26   7.7  
U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical pr...    26   7.7  
U13071-2|AAL65793.1|  988|Caenorhabditis elegans Hypothetical pr...    26   7.7  
AF025452-1|AAB70944.1|  411|Caenorhabditis elegans C-type lectin...    26   7.7  

>U00043-11|AAN65290.1|  641|Caenorhabditis elegans Hypothetical
           protein T26A5.2b protein.
          Length = 641

 Score = 29.1 bits (62), Expect = 0.83
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -1

Query: 202 FVRDFSINSSKFSAATPIFFFAFDICNFISFFHFYTKIN 86
           F R+   NS  F  +   ++  FD+ +F+   H Y+ +N
Sbjct: 311 FTRNLVRNSKDFELSKAFYYVDFDLAHFVESDHCYSLLN 349


>U00043-10|AAC77505.1|  779|Caenorhabditis elegans Hypothetical
           protein T26A5.2a protein.
          Length = 779

 Score = 29.1 bits (62), Expect = 0.83
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -1

Query: 202 FVRDFSINSSKFSAATPIFFFAFDICNFISFFHFYTKIN 86
           F R+   NS  F  +   ++  FD+ +F+   H Y+ +N
Sbjct: 449 FTRNLVRNSKDFELSKAFYYVDFDLAHFVESDHCYSLLN 487


>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical
           protein C52A11.4d protein.
          Length = 2491

 Score = 28.3 bits (60), Expect = 1.4
 Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -1

Query: 190 FSINSSK-FSAATPIFFFAFDICNFISFFHF 101
           FS +SS  FSA  P FFF F +  FI  FHF
Sbjct: 9   FSTSSSSIFSAFIPSFFFTFPLFFFI--FHF 37


>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical
           protein C52A11.4d protein.
          Length = 2491

 Score = 28.3 bits (60), Expect = 1.4
 Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -1

Query: 190 FSINSSK-FSAATPIFFFAFDICNFISFFHF 101
           FS +SS  FSA  P FFF F +  FI  FHF
Sbjct: 9   FSTSSSSIFSAFIPSFFFTFPLFFFI--FHF 37


>Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical
           protein ZC84.1 protein.
          Length = 1556

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 10/32 (31%), Positives = 21/32 (65%)
 Frame = +3

Query: 201 KFWFNASCAECRLFVAEDGTQVDDNDYLATLD 296
           ++W+NA   +C++F    G Q +DN++ + +D
Sbjct: 541 RYWYNARTRQCQMF-EYTGCQGNDNNFDSIMD 571


>Z19157-4|CAA79570.1| 1474|Caenorhabditis elegans Hypothetical
           protein ZC84.6 protein.
          Length = 1474

 Score = 27.5 bits (58), Expect = 2.5
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = +3

Query: 186 EKSRTKFWFNASCAECRLFVAEDGTQVDDNDYLATLD 296
           ++S  ++W++A+  EC+ F    G Q +DN++   +D
Sbjct: 449 DRSVRRYWYSAATRECQSF-EYTGCQGNDNNFETLVD 484


>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
            C41A3.1 protein.
          Length = 7829

 Score = 27.5 bits (58), Expect = 2.5
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
 Frame = +3

Query: 156  VAAENLEELIE-KSRTKFWFNASCAECRLFVAEDG---TQVDDNDYLATLDY 299
            ++  N  EL++ ++  K WFN    +  LF A  G   T +  N+YL    Y
Sbjct: 5793 LSVNNNNELLKIRTNKKTWFNGKSPKIALFFAPQGIQFTNILPNEYLKNSAY 5844


>AC024799-7|AAW88388.1|  295|Caenorhabditis elegans Hypothetical
           protein Y49C4A.3 protein.
          Length = 295

 Score = 27.5 bits (58), Expect = 2.5
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = -1

Query: 220 LALNQNFVRDFSINSSKFSAATPIFFFAF--DICNFISFFHF 101
           + LN N V  F++N SK      +F+F F  DI   IS F +
Sbjct: 20  IILNSNLVCKFALNKSKRKNDMHLFYFRFILDIILEISLFMY 61


>Z82260-12|CAB05141.2|  129|Caenorhabditis elegans Hypothetical
           protein C32H11.7a protein.
          Length = 129

 Score = 27.1 bits (57), Expect = 3.3
 Identities = 16/35 (45%), Positives = 17/35 (48%)
 Frame = -1

Query: 181 NSSKFSAATPIFFFAFDICNFISFFHFYTKINK*T 77
           N S  S A  +F F    CNF  FFH Y  I K T
Sbjct: 11  NPSAPSLAKILFNFFSIFCNFSRFFHDYRVILKST 45


>Z81463-1|CAB03850.1|  342|Caenorhabditis elegans Hypothetical
           protein C06B8.1 protein.
          Length = 342

 Score = 25.8 bits (54), Expect = 7.7
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 263 LCTILGHEQATFCAAGIEPKLCARFFNQLF 174
           +C + G  +A     GI  + CA FF + F
Sbjct: 1   MCQVCGAAEADLHFGGISCRACAAFFRRFF 30


>U40409-8|AAA81389.1|  156|Caenorhabditis elegans Hypothetical
           protein F32A6.1 protein.
          Length = 156

 Score = 25.8 bits (54), Expect = 7.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 129 MSNAKKKIGVAAENLEELIEKSRTK 203
           + +  K  GV+ ENLEEL+ K+  K
Sbjct: 86  LDDKNKMEGVSGENLEELLSKAAEK 110


>U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical
           protein F30H5.3 protein.
          Length = 1599

 Score = 25.8 bits (54), Expect = 7.7
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +3

Query: 186 EKSRTKFWFNASCAECRLFVAEDGTQVDDNDYLATLDYHMT 308
           ++S  ++W+NA    C +F    G Q +DN++   L+   T
Sbjct: 573 KQSVRRYWYNAVTRACEIF-DYTGCQGNDNNFETLLECQNT 612


>U13071-2|AAL65793.1|  988|Caenorhabditis elegans Hypothetical
           protein T22F7.3 protein.
          Length = 988

 Score = 25.8 bits (54), Expect = 7.7
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +3

Query: 201 KFWFNASCAECRLFVAEDGTQVDDNDY 281
           ++W+NA+   C +F    G Q +DN++
Sbjct: 462 RYWYNAATRSCEMF-QYTGCQGNDNNF 487


>AF025452-1|AAB70944.1|  411|Caenorhabditis elegans C-type lectin
           protein 2 protein.
          Length = 411

 Score = 25.8 bits (54), Expect = 7.7
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +3

Query: 207 WFNASCAECRLFVAEDGTQVDDNDYLATLDYHMT 308
           W +A C + R FV E  T  +D+ Y    +Y  T
Sbjct: 131 WISADCTDRRSFVCETPTTHEDSCYYNYNNYCYT 164


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,506,332
Number of Sequences: 27780
Number of extensions: 137962
Number of successful extensions: 427
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 427
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 418861482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)