Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_H01
(165 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 51 1e-07
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 51 1e-07
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 51 1e-07
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 51 1e-07
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 51 1e-07
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 51 1e-07
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 51 1e-07
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 51 1e-07
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 50 2e-07
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 50 2e-07
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 50 2e-07
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 50 2e-07
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 50 2e-07
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 48 7e-07
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 48 9e-07
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 30 0.25
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 30 0.25
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 30 0.25
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 30 0.25
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 29 0.33
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 29 0.33
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 29 0.59
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 28 0.77
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 25 5.5
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 25 5.5
Z48009-5|CAA88086.1| 329|Caenorhabditis elegans Hypothetical pr... 25 7.2
U39674-6|AAA80416.1| 291|Caenorhabditis elegans Hypothetical pr... 25 7.2
AF003389-10|AAC71135.2| 289|Caenorhabditis elegans Hypothetical... 25 7.2
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 50.8 bits (116), Expect = 1e-07
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = +2
Query: 95 MRECISVHVGQAGVQIGNACWEL 163
MRE IS+HVGQAGVQIGNACWEL
Sbjct: 1 MREVISIHVGQAGVQIGNACWEL 23
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 50.8 bits (116), Expect = 1e-07
Identities = 23/27 (85%), Positives = 24/27 (88%), Gaps = 1/27 (3%)
Frame = +2
Query: 86 QYK-MRECISVHVGQAGVQIGNACWEL 163
QYK RE IS+HVGQAGVQIGNACWEL
Sbjct: 3 QYKGSREVISIHVGQAGVQIGNACWEL 29
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 50.8 bits (116), Expect = 1e-07
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = +2
Query: 95 MRECISVHVGQAGVQIGNACWEL 163
MRE IS+HVGQAGVQIGNACWEL
Sbjct: 1 MREVISIHVGQAGVQIGNACWEL 23
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 50.8 bits (116), Expect = 1e-07
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = +2
Query: 95 MRECISVHVGQAGVQIGNACWEL 163
MRE IS+HVGQAGVQIGNACWEL
Sbjct: 1 MREVISIHVGQAGVQIGNACWEL 23
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 50.8 bits (116), Expect = 1e-07
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = +2
Query: 95 MRECISVHVGQAGVQIGNACWEL 163
MRE IS+HVGQAGVQIGNACWEL
Sbjct: 1 MREVISIHVGQAGVQIGNACWEL 23
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 50.8 bits (116), Expect = 1e-07
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = +2
Query: 95 MRECISVHVGQAGVQIGNACWEL 163
MRE IS+HVGQAGVQIGNACWEL
Sbjct: 1 MREVISIHVGQAGVQIGNACWEL 23
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 50.8 bits (116), Expect = 1e-07
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = +2
Query: 95 MRECISVHVGQAGVQIGNACWEL 163
MRE IS+HVGQAGVQIGNACWEL
Sbjct: 1 MREVISIHVGQAGVQIGNACWEL 23
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 50.8 bits (116), Expect = 1e-07
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = +2
Query: 95 MRECISVHVGQAGVQIGNACWEL 163
MRE IS+HVGQAGVQIGNACWEL
Sbjct: 1 MREVISIHVGQAGVQIGNACWEL 23
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 50.4 bits (115), Expect = 2e-07
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +2
Query: 98 RECISVHVGQAGVQIGNACWEL 163
REC+S+H+GQAG QIGNACWEL
Sbjct: 6 RECVSIHIGQAGAQIGNACWEL 27
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 50.4 bits (115), Expect = 2e-07
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +2
Query: 95 MRECISVHVGQAGVQIGNACWEL 163
MRE IS+H+GQAGVQIGNACWEL
Sbjct: 1 MREVISIHIGQAGVQIGNACWEL 23
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 50.4 bits (115), Expect = 2e-07
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +2
Query: 95 MRECISVHVGQAGVQIGNACWEL 163
MRE IS+H+GQAGVQIGNACWEL
Sbjct: 1 MREVISIHIGQAGVQIGNACWEL 23
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 50.4 bits (115), Expect = 2e-07
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +2
Query: 95 MRECISVHVGQAGVQIGNACWEL 163
MRE IS+H+GQAGVQIGNACWEL
Sbjct: 1 MREVISIHIGQAGVQIGNACWEL 23
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 50.0 bits (114), Expect = 2e-07
Identities = 19/23 (82%), Positives = 22/23 (95%)
Frame = +2
Query: 95 MRECISVHVGQAGVQIGNACWEL 163
MRE +S+H+GQAGVQIGNACWEL
Sbjct: 1 MREIVSIHIGQAGVQIGNACWEL 23
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 48.4 bits (110), Expect = 7e-07
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +2
Query: 98 RECISVHVGQAGVQIGNACWEL 163
RE IS+H+GQAGVQIGNACWEL
Sbjct: 1 REVISIHIGQAGVQIGNACWEL 22
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 48.0 bits (109), Expect = 9e-07
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = +2
Query: 92 KMRECISVHVGQAGVQIGNACWEL 163
+ RE IS+HVGQAGVQ+GNACWEL
Sbjct: 5 RSREVISIHVGQAGVQMGNACWEL 28
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 29.9 bits (64), Expect = 0.25
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 95 MRECISVHVGQAGVQIGNACWEL 163
MRE + V GQ G QIG+ WE+
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEV 23
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 29.9 bits (64), Expect = 0.25
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 95 MRECISVHVGQAGVQIGNACWE 160
M+E I+V VGQ G QIG WE
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWE 22
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 29.9 bits (64), Expect = 0.25
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 95 MRECISVHVGQAGVQIGNACWE 160
M+E I+V VGQ G QIG WE
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWE 22
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 29.9 bits (64), Expect = 0.25
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 95 MRECISVHVGQAGVQIGNACWEL 163
MRE + V GQ G QIG+ WE+
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEV 23
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 29.5 bits (63), Expect = 0.33
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 95 MRECISVHVGQAGVQIGNACWEL 163
MRE + + GQ G QIG+ WE+
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEV 23
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 29.5 bits (63), Expect = 0.33
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 95 MRECISVHVGQAGVQIGNACWEL 163
MRE + + GQ G QIG+ WE+
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEV 23
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 28.7 bits (61), Expect = 0.59
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 95 MRECISVHVGQAGVQIGNACWEL 163
MRE + V GQ G QIG WE+
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEV 23
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 28.3 bits (60), Expect = 0.77
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 95 MRECISVHVGQAGVQIGNACWEL 163
MRE + + GQ G QIG WE+
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEV 23
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 25.4 bits (53), Expect = 5.5
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 107 ISVHVGQAGVQIGNACWE 160
++VHVGQ G Q+ A W+
Sbjct: 8 MTVHVGQCGNQLAQAFWK 25
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 25.4 bits (53), Expect = 5.5
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 107 ISVHVGQAGVQIGNACWE 160
++VHVGQ G Q+ A W+
Sbjct: 8 MTVHVGQCGNQLAQAFWK 25
>Z48009-5|CAA88086.1| 329|Caenorhabditis elegans Hypothetical
protein AH6.7 protein.
Length = 329
Score = 25.0 bits (52), Expect = 7.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 112 CTRWPSRSPDRKCLLGAV 165
CT WPS+S DR + ++
Sbjct: 175 CTSWPSKSRDRSTMFFSI 192
>U39674-6|AAA80416.1| 291|Caenorhabditis elegans Hypothetical
protein C06E2.1 protein.
Length = 291
Score = 25.0 bits (52), Expect = 7.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 149 HFRSGLRLGQRVQRCTHAFCIEFFELKCR 63
H S + L + +C+ AF IEF LK R
Sbjct: 209 HALSLIHLENAIVKCSRAFTIEFDYLKLR 237
>AF003389-10|AAC71135.2| 289|Caenorhabditis elegans Hypothetical
protein F23H11.7 protein.
Length = 289
Score = 25.0 bits (52), Expect = 7.2
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +3
Query: 114 YTLAKPESRSEMPAG 158
Y + PESRSE PAG
Sbjct: 30 YQVCAPESRSECPAG 44
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,619,475
Number of Sequences: 27780
Number of extensions: 47876
Number of successful extensions: 143
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 143
length of database: 12,740,198
effective HSP length: 35
effective length of database: 11,767,898
effective search space used: 223590062
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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