Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_G24
         (400 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113556-1|AAM29561.1|  171|Drosophila melanogaster RH04289p pro...    85   4e-17
AY071728-1|AAL49350.1|  171|Drosophila melanogaster RH44771p pro...    85   4e-17
AE014297-1254|AAF54602.2|  171|Drosophila melanogaster CG6666-PA...    85   4e-17
AY089360-1|AAL90098.1|  261|Drosophila melanogaster AT18465p pro...    60   8e-10
AE014297-1237|AAF54585.1|  261|Drosophila melanogaster CG6629-PA...    60   8e-10
AE014135-75|AAF59348.3| 1140|Drosophila melanogaster CG2052-PB, ...    29   3.0  
AY070797-1|AAL48419.2|  182|Drosophila melanogaster AT18217p pro...    27   9.2  

>AY113556-1|AAM29561.1|  171|Drosophila melanogaster RH04289p
           protein.
          Length = 171

 Score = 84.6 bits (200), Expect = 4e-17
 Identities = 47/102 (46%), Positives = 61/102 (59%)
 Frame = +2

Query: 95  ATLSRFPATLSTVNYAQSAAGVPKITFKNYEPPKEEHHDIKNARMNRPLSPHLTIYSIQL 274
           ++L R PA    +  A ++  V        E  K+E    KN R+ R LSPHLTIY  QL
Sbjct: 6   SSLIRSPALRQGLQMAAASRQVSMKVVSVAETQKDESFFEKNERLGRELSPHLTIYQPQL 65

Query: 275 TSMLSLTHRTTGLILTTYVSALGIGALVLPNDISYYMAIVEG 400
           TSMLS+ HR TGL L   V  LG+GAL+  +DIS+Y+ +VEG
Sbjct: 66  TSMLSICHRGTGLALGVGVWGLGLGALISSHDISHYVTMVEG 107


>AY071728-1|AAL49350.1|  171|Drosophila melanogaster RH44771p
           protein.
          Length = 171

 Score = 84.6 bits (200), Expect = 4e-17
 Identities = 47/102 (46%), Positives = 61/102 (59%)
 Frame = +2

Query: 95  ATLSRFPATLSTVNYAQSAAGVPKITFKNYEPPKEEHHDIKNARMNRPLSPHLTIYSIQL 274
           ++L R PA    +  A ++  V        E  K+E    KN R+ R LSPHLTIY  QL
Sbjct: 6   SSLIRSPALRQGLQMAAASRPVSMKVVSVAETQKDESFFEKNERLGRELSPHLTIYQPQL 65

Query: 275 TSMLSLTHRTTGLILTTYVSALGIGALVLPNDISYYMAIVEG 400
           TSMLS+ HR TGL L   V  LG+GAL+  +DIS+Y+ +VEG
Sbjct: 66  TSMLSICHRGTGLALGVGVWGLGLGALISSHDISHYVTMVEG 107


>AE014297-1254|AAF54602.2|  171|Drosophila melanogaster CG6666-PA
           protein.
          Length = 171

 Score = 84.6 bits (200), Expect = 4e-17
 Identities = 47/102 (46%), Positives = 61/102 (59%)
 Frame = +2

Query: 95  ATLSRFPATLSTVNYAQSAAGVPKITFKNYEPPKEEHHDIKNARMNRPLSPHLTIYSIQL 274
           ++L R PA    +  A ++  V        E  K+E    KN R+ R LSPHLTIY  QL
Sbjct: 6   SSLIRSPALRQGLQMAAASRPVSMKVVSVAETQKDESFFEKNERLGRELSPHLTIYQPQL 65

Query: 275 TSMLSLTHRTTGLILTTYVSALGIGALVLPNDISYYMAIVEG 400
           TSMLS+ HR TGL L   V  LG+GAL+  +DIS+Y+ +VEG
Sbjct: 66  TSMLSICHRGTGLALGVGVWGLGLGALISSHDISHYVTMVEG 107


>AY089360-1|AAL90098.1|  261|Drosophila melanogaster AT18465p
           protein.
          Length = 261

 Score = 60.5 bits (140), Expect = 8e-10
 Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
 Frame = +2

Query: 158 VPKITFK--NYEPPKEEHHDIKNARMNRPLSPHLTIYSIQLTSMLSLTHRTTGLILTTYV 331
           VP +T K   +  P +  +D +N  + R LSPHL+IY IQLTS LS   R +G +L  +V
Sbjct: 57  VPPVTLKVIPFRMPPDLPYDDRNMLLGRQLSPHLSIYKIQLTSTLSAFLRISGFVLAVFV 116

Query: 332 SALGIGALVLPNDISYYMAIVE 397
             +GI  L L  D+  ++  VE
Sbjct: 117 WFVGISGLCLQGDMEGFIKKVE 138


>AE014297-1237|AAF54585.1|  261|Drosophila melanogaster CG6629-PA
           protein.
          Length = 261

 Score = 60.5 bits (140), Expect = 8e-10
 Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
 Frame = +2

Query: 158 VPKITFK--NYEPPKEEHHDIKNARMNRPLSPHLTIYSIQLTSMLSLTHRTTGLILTTYV 331
           VP +T K   +  P +  +D +N  + R LSPHL+IY IQLTS LS   R +G +L  +V
Sbjct: 57  VPPVTLKVIPFRMPPDLPYDDRNMLLGRQLSPHLSIYKIQLTSTLSAFLRISGFVLAVFV 116

Query: 332 SALGIGALVLPNDISYYMAIVE 397
             +GI  L L  D+  ++  VE
Sbjct: 117 WFVGISGLCLQGDMEGFIKKVE 138


>AE014135-75|AAF59348.3| 1140|Drosophila melanogaster CG2052-PB,
           isoform B protein.
          Length = 1140

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = -3

Query: 146 TEHS*RCLTSQE--TCLGSPEPTYCPICH 66
           TE S R  TS++    +G P  T CP+CH
Sbjct: 542 TESSLRTHTSKQHAALIGGPNATSCPVCH 570


>AY070797-1|AAL48419.2|  182|Drosophila melanogaster AT18217p
           protein.
          Length = 182

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +1

Query: 40  SVNHGFVVLWQIGQ*VGSGDPKQVSCDVK 126
           S+NH FVV+WQI +    G PK  +  +K
Sbjct: 6   SLNHSFVVVWQIER---QGKPKMDAPTIK 31


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,248,235
Number of Sequences: 53049
Number of extensions: 342610
Number of successful extensions: 748
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)