Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_G20
         (165 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    20   2.4  
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    20   2.4  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        18   9.7  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        18   9.7  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        18   9.7  

>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6
          variant 2 precursor protein.
          Length = 94

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 5/10 (50%), Positives = 7/10 (70%)
 Frame = -2

Query: 38 ICVLICKPSC 9
          +C+ IC P C
Sbjct: 62 LCIKICAPGC 71


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6
          variant 1 precursor protein.
          Length = 92

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 5/10 (50%), Positives = 7/10 (70%)
 Frame = -2

Query: 38 ICVLICKPSC 9
          +C+ IC P C
Sbjct: 62 LCIKICAPGC 71


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 56  KDLYNRICVLICKP 15
           K+ Y+ +C L  KP
Sbjct: 212 KETYSNMCALCEKP 225


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 56  KDLYNRICVLICKP 15
           K+ Y+ +C L  KP
Sbjct: 212 KETYSNMCALCEKP 225


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 56  KDLYNRICVLICKP 15
           K+ Y+ +C L  KP
Sbjct: 212 KETYSNMCALCEKP 225


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,155
Number of Sequences: 438
Number of extensions: 836
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 34
effective length of database: 131,451
effective search space used:  2629020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)