Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_G19
(316 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC046247-1|AAH46247.1| 802|Homo sapiens carbohydrate (chondroit... 37 0.011
AY358529-1|AAQ88893.1| 802|Homo sapiens CHSY1 protein. 37 0.011
AB071402-1|BAB64936.1| 802|Homo sapiens chondroitin synthase pr... 37 0.011
AB023207-1|BAA76834.2| 883|Homo sapiens KIAA0990 protein protein. 37 0.011
AJ578034-1|CAE17326.1| 882|Homo sapiens chodroitin synthase 2 p... 36 0.019
AJ504664-1|CAD43233.1| 573|Homo sapiens chondroitin synthase 2 ... 36 0.019
AB175496-1|BAF47165.1| 882|Homo sapiens chondroitin synthase-2 ... 36 0.019
AB086062-1|BAC98832.1| 882|Homo sapiens chondroitin sulfate syn... 36 0.019
BC064509-1|AAH64509.1| 666|Homo sapiens CSGlcA-T protein protein. 31 0.54
AY358407-1|AAQ88773.1| 772|Homo sapiens RLSS299 protein. 31 0.54
AB037823-1|BAA92640.1| 788|Homo sapiens KIAA1402 protein protein. 31 0.54
AY358441-1|AAQ88806.1| 532|Homo sapiens MMVR656 protein. 31 0.71
AK002126-1|BAA92093.1| 275|Homo sapiens protein ( Homo sapiens ... 31 0.71
AB081516-1|BAC16217.1| 532|Homo sapiens beta-1,4-N-acetylgalact... 31 0.71
AB071403-1|BAB85992.1| 532|Homo sapiens chondroitin beta1,4 N-a... 31 0.71
BX641073-1|CAE46036.1| 216|Homo sapiens hypothetical protein pr... 28 5.0
BC030268-1|AAH30268.1| 542|Homo sapiens chondroitin sulfate Gal... 28 5.0
AK074474-1|BAB85092.1| 180|Homo sapiens protein ( Homo sapiens ... 28 5.0
AB090811-1|BAC55936.1| 542|Homo sapiens chondroitin beta1,4 N-a... 28 5.0
AB079252-1|BAC55935.1| 542|Homo sapiens beta-1,4-N-acethylgalac... 28 5.0
D31716-1|BAA06524.1| 244|Homo sapiens GC box binding protein pr... 27 8.8
BC074880-1|AAH74880.1| 244|Homo sapiens Kruppel-like factor 9 p... 27 8.8
BC074879-1|AAH74879.1| 244|Homo sapiens Kruppel-like factor 9 p... 27 8.8
BC069431-1|AAH69431.1| 244|Homo sapiens Kruppel-like factor 9 p... 27 8.8
AL162390-2|CAB99349.1| 244|Homo sapiens Kruppel-like factor 9 p... 27 8.8
>BC046247-1|AAH46247.1| 802|Homo sapiens carbohydrate (chondroitin)
synthase 1 protein.
Length = 802
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +1
Query: 7 GSLREAAAVAISSALPRVPRDALLAVVPPHAEFNQEFLNRVRMNTIAGEQWYLPVAFARH 186
G A A+ + S+ + ++LL F EFL R R NT+ G+Q Y P+ F+++
Sbjct: 606 GEFSRALALEVGSS--QFNNESLLFFCDVDLVFTTEFLQRCRANTVLGQQIYFPIIFSQY 663
>AY358529-1|AAQ88893.1| 802|Homo sapiens CHSY1 protein.
Length = 802
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +1
Query: 7 GSLREAAAVAISSALPRVPRDALLAVVPPHAEFNQEFLNRVRMNTIAGEQWYLPVAFARH 186
G A A+ + S+ + ++LL F EFL R R NT+ G+Q Y P+ F+++
Sbjct: 606 GEFSRALALEVGSS--QFNNESLLFFCDVDLVFTTEFLQRCRANTVLGQQIYFPIIFSQY 663
>AB071402-1|BAB64936.1| 802|Homo sapiens chondroitin synthase
protein.
Length = 802
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +1
Query: 7 GSLREAAAVAISSALPRVPRDALLAVVPPHAEFNQEFLNRVRMNTIAGEQWYLPVAFARH 186
G A A+ + S+ + ++LL F EFL R R NT+ G+Q Y P+ F+++
Sbjct: 606 GEFSRALALEVGSS--QFNNESLLFFCDVDLVFTTEFLQRCRANTVLGQQIYFPIIFSQY 663
>AB023207-1|BAA76834.2| 883|Homo sapiens KIAA0990 protein protein.
Length = 883
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +1
Query: 7 GSLREAAAVAISSALPRVPRDALLAVVPPHAEFNQEFLNRVRMNTIAGEQWYLPVAFARH 186
G A A+ + S+ + ++LL F EFL R R NT+ G+Q Y P+ F+++
Sbjct: 687 GEFSRALALEVGSS--QFNNESLLFFCDVDLVFTTEFLQRCRANTVLGQQIYFPIIFSQY 744
>AJ578034-1|CAE17326.1| 882|Homo sapiens chodroitin synthase 2
protein.
Length = 882
Score = 36.3 bits (80), Expect = 0.019
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +1
Query: 31 VAISSALPRVPRDALLAVVPPHAEFNQEFLNRVRMNTIAGEQWYLPVAFARH 186
+ + A + D LL F ++FL R R NTI G+Q Y P+ F+++
Sbjct: 699 LGLEMASAQFDNDTLLLFCDVDLIFREDFLQRCRDNTIQGQQVYYPIIFSQY 750
>AJ504664-1|CAD43233.1| 573|Homo sapiens chondroitin synthase 2
protein.
Length = 573
Score = 36.3 bits (80), Expect = 0.019
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +1
Query: 31 VAISSALPRVPRDALLAVVPPHAEFNQEFLNRVRMNTIAGEQWYLPVAFARH 186
+ + A + D LL F ++FL R R NTI G+Q Y P+ F+++
Sbjct: 390 LGLEMASAQFDNDTLLLFCDVDLIFREDFLQRCRDNTIQGQQVYYPIIFSQY 441
>AB175496-1|BAF47165.1| 882|Homo sapiens chondroitin synthase-2
protein.
Length = 882
Score = 36.3 bits (80), Expect = 0.019
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +1
Query: 31 VAISSALPRVPRDALLAVVPPHAEFNQEFLNRVRMNTIAGEQWYLPVAFARH 186
+ + A + D LL F ++FL R R NTI G+Q Y P+ F+++
Sbjct: 699 LGLEMASAQFDNDTLLLFCDVDLIFREDFLQRCRDNTIQGQQVYYPIIFSQY 750
>AB086062-1|BAC98832.1| 882|Homo sapiens chondroitin sulfate
synthase protein.
Length = 882
Score = 36.3 bits (80), Expect = 0.019
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +1
Query: 31 VAISSALPRVPRDALLAVVPPHAEFNQEFLNRVRMNTIAGEQWYLPVAFARH 186
+ + A + D LL F ++FL R R NTI G+Q Y P+ F+++
Sbjct: 699 LGLEMASAQFDNDTLLLFCDVDLIFREDFLQRCRDNTIQGQQVYYPIIFSQY 750
>BC064509-1|AAH64509.1| 666|Homo sapiens CSGlcA-T protein protein.
Length = 666
Score = 31.5 bits (68), Expect = 0.54
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = +1
Query: 61 PRDALLAVVPPHAEFNQEFLNRVRMNTIAGEQWYLPVAFARHSQYAHPRFLTP 219
P D L + E LNR RMN I+G Q + PV F + P+ P
Sbjct: 585 PVDTLFFLTTVWTRPGPEVLNRCRMNAISGWQAFFPVHFQEFNPALSPQRSPP 637
>AY358407-1|AAQ88773.1| 772|Homo sapiens RLSS299 protein.
Length = 772
Score = 31.5 bits (68), Expect = 0.54
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = +1
Query: 61 PRDALLAVVPPHAEFNQEFLNRVRMNTIAGEQWYLPVAFARHSQYAHPRFLTP 219
P D L + E LNR RMN I+G Q + PV F + P+ P
Sbjct: 585 PVDTLFFLTTVWTRPGPEVLNRCRMNAISGWQAFFPVHFQEFNPALSPQRSPP 637
>AB037823-1|BAA92640.1| 788|Homo sapiens KIAA1402 protein protein.
Length = 788
Score = 31.5 bits (68), Expect = 0.54
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = +1
Query: 61 PRDALLAVVPPHAEFNQEFLNRVRMNTIAGEQWYLPVAFARHSQYAHPRFLTP 219
P D L + E LNR RMN I+G Q + PV F + P+ P
Sbjct: 601 PVDTLFFLTTVWTRPGPEVLNRCRMNAISGWQAFFPVHFQEFNPALSPQRSPP 653
>AY358441-1|AAQ88806.1| 532|Homo sapiens MMVR656 protein.
Length = 532
Score = 31.1 bits (67), Expect = 0.71
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 103 FNQEFLNRVRMNTIAGEQWYLPVAFARHS 189
F EFLN R+NT G++ + PV F++++
Sbjct: 363 FTSEFLNTCRLNTQPGKKVFYPVLFSQYN 391
>AK002126-1|BAA92093.1| 275|Homo sapiens protein ( Homo sapiens
cDNA FLJ11264 fis, clone PLACE1009111. ).
Length = 275
Score = 31.1 bits (67), Expect = 0.71
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 103 FNQEFLNRVRMNTIAGEQWYLPVAFARHS 189
F EFLN R+NT G++ + PV F++++
Sbjct: 106 FTSEFLNTCRLNTQPGKKVFYPVLFSQYN 134
>AB081516-1|BAC16217.1| 532|Homo sapiens
beta-1,4-N-acetylgalactosaminyltransferase protein.
Length = 532
Score = 31.1 bits (67), Expect = 0.71
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 103 FNQEFLNRVRMNTIAGEQWYLPVAFARHS 189
F EFLN R+NT G++ + PV F++++
Sbjct: 363 FTSEFLNTCRLNTQPGKKVFYPVLFSQYN 391
>AB071403-1|BAB85992.1| 532|Homo sapiens chondroitin beta1,4
N-acetylgalactosaminyltransferase protein.
Length = 532
Score = 31.1 bits (67), Expect = 0.71
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 103 FNQEFLNRVRMNTIAGEQWYLPVAFARHS 189
F EFLN R+NT G++ + PV F++++
Sbjct: 363 FTSEFLNTCRLNTQPGKKVFYPVLFSQYN 391
>BX641073-1|CAE46036.1| 216|Homo sapiens hypothetical protein
protein.
Length = 216
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 103 FNQEFLNRVRMNTIAGEQWYLPVAFARHS 189
F+ EFLN R+N G++ + PV F+ ++
Sbjct: 46 FSAEFLNSCRLNAEPGKKVFYPVVFSLYN 74
>BC030268-1|AAH30268.1| 542|Homo sapiens chondroitin sulfate
GalNAcT-2 protein.
Length = 542
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 103 FNQEFLNRVRMNTIAGEQWYLPVAFARHS 189
F+ EFLN R+N G++ + PV F+ ++
Sbjct: 372 FSAEFLNSCRLNAEPGKKVFYPVVFSLYN 400
>AK074474-1|BAB85092.1| 180|Homo sapiens protein ( Homo sapiens
cDNA FLJ23894 fis, clone LNG14612. ).
Length = 180
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 103 FNQEFLNRVRMNTIAGEQWYLPVAFARHS 189
F+ EFLN R+N G++ + PV F+ ++
Sbjct: 10 FSAEFLNSCRLNAEPGKKVFYPVVFSLYN 38
>AB090811-1|BAC55936.1| 542|Homo sapiens chondroitin beta1,4
N-acetylgalactosaminyltransferase-2 protein.
Length = 542
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 103 FNQEFLNRVRMNTIAGEQWYLPVAFARHS 189
F+ EFLN R+N G++ + PV F+ ++
Sbjct: 372 FSAEFLNSCRLNAEPGKKVFYPVVFSLYN 400
>AB079252-1|BAC55935.1| 542|Homo sapiens
beta-1,4-N-acethylgalactosaminyltransferase protein.
Length = 542
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 103 FNQEFLNRVRMNTIAGEQWYLPVAFARHS 189
F+ EFLN R+N G++ + PV F+ ++
Sbjct: 372 FSAEFLNSCRLNAEPGKKVFYPVVFSLYN 400
>D31716-1|BAA06524.1| 244|Homo sapiens GC box binding protein
protein.
Length = 244
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -2
Query: 156 LLARYRVHADPIQELLVELCMRRYHRQQRVTRHARQ 49
L YR H ++ LC +R+ R +T+HAR+
Sbjct: 190 LTRHYRTHTGE-KQFRCPLCEKRFMRSDHLTKHARR 224
>BC074880-1|AAH74880.1| 244|Homo sapiens Kruppel-like factor 9
protein.
Length = 244
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -2
Query: 156 LLARYRVHADPIQELLVELCMRRYHRQQRVTRHARQ 49
L YR H ++ LC +R+ R +T+HAR+
Sbjct: 190 LTRHYRTHTGE-KQFRCPLCEKRFMRSDHLTKHARR 224
>BC074879-1|AAH74879.1| 244|Homo sapiens Kruppel-like factor 9
protein.
Length = 244
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -2
Query: 156 LLARYRVHADPIQELLVELCMRRYHRQQRVTRHARQ 49
L YR H ++ LC +R+ R +T+HAR+
Sbjct: 190 LTRHYRTHTGE-KQFRCPLCEKRFMRSDHLTKHARR 224
>BC069431-1|AAH69431.1| 244|Homo sapiens Kruppel-like factor 9
protein.
Length = 244
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -2
Query: 156 LLARYRVHADPIQELLVELCMRRYHRQQRVTRHARQ 49
L YR H ++ LC +R+ R +T+HAR+
Sbjct: 190 LTRHYRTHTGE-KQFRCPLCEKRFMRSDHLTKHARR 224
>AL162390-2|CAB99349.1| 244|Homo sapiens Kruppel-like factor 9
protein.
Length = 244
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -2
Query: 156 LLARYRVHADPIQELLVELCMRRYHRQQRVTRHARQ 49
L YR H ++ LC +R+ R +T+HAR+
Sbjct: 190 LTRHYRTHTGE-KQFRCPLCEKRFMRSDHLTKHARR 224
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,662,749
Number of Sequences: 237096
Number of extensions: 609951
Number of successful extensions: 2046
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2046
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1453211950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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