Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_G13
(222 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein. 29 0.34
AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated... 29 0.34
AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated... 29 0.34
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 29 0.34
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 0.34
AL110478-4|CAB54346.1| 546|Caenorhabditis elegans Hypothetical ... 27 1.4
U64859-1|AAC69092.2| 468|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z81119-8|CAB03340.1| 504|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z92825-4|CAB07312.1| 467|Caenorhabditis elegans Hypothetical pr... 26 3.1
U23455-6|AAC46536.2| 518|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z54327-12|CAD56557.1| 543|Caenorhabditis elegans Hypothetical p... 26 4.2
Z54327-11|CAD56556.1| 589|Caenorhabditis elegans Hypothetical p... 26 4.2
Z54307-8|CAD56577.1| 543|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z54307-7|CAD56576.1| 589|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z54307-5|CAD56575.1| 513|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z54307-4|CAD56574.1| 510|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z54307-3|CAD56573.1| 516|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z54307-2|CAD56572.1| 503|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z54307-1|CAA91092.2| 493|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z79759-4|CAB02139.2| 395|Caenorhabditis elegans Hypothetical pr... 25 5.5
U67737-1|AAC63596.1| 395|Caenorhabditis elegans MEL-26 protein. 25 5.5
AF303255-1|AAG50213.1| 573|Caenorhabditis elegans putative guan... 25 5.5
AC024817-8|AAU05551.1| 535|Caenorhabditis elegans Hypothetical ... 25 5.5
AC024817-7|AAK68527.1| 573|Caenorhabditis elegans Hypothetical ... 25 5.5
Z92827-5|CAB07325.1| 732|Caenorhabditis elegans Hypothetical pr... 25 7.3
U51993-1|AAB36851.2| 377|Caenorhabditis elegans Hypothetical pr... 25 7.3
U88168-10|AAC24399.1| 407|Caenorhabditis elegans Hypothetical p... 25 9.6
AF016430-11|AAB65375.1| 387|Caenorhabditis elegans Hypothetical... 25 9.6
>AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein.
Length = 1338
Score = 29.5 bits (63), Expect = 0.34
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -1
Query: 84 WDLDEFYIPVEPITMKNDLNGLG 16
W EF+IP P+T+++D+ G+G
Sbjct: 1289 WASPEFHIPETPVTVQSDMWGMG 1311
>AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated
protein 89, isoform c protein.
Length = 1393
Score = 29.5 bits (63), Expect = 0.34
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -1
Query: 84 WDLDEFYIPVEPITMKNDLNGLG 16
W EF+IP P+T+++D+ G+G
Sbjct: 1253 WASPEFHIPETPVTVQSDMWGMG 1275
>AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated
protein 89, isoform d protein.
Length = 1396
Score = 29.5 bits (63), Expect = 0.34
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -1
Query: 84 WDLDEFYIPVEPITMKNDLNGLG 16
W EF+IP P+T+++D+ G+G
Sbjct: 1256 WASPEFHIPETPVTVQSDMWGMG 1278
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 29.5 bits (63), Expect = 0.34
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -1
Query: 84 WDLDEFYIPVEPITMKNDLNGLG 16
W EF+IP P+T+++D+ G+G
Sbjct: 7301 WASPEFHIPETPVTVQSDMWGMG 7323
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.5 bits (63), Expect = 0.34
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -1
Query: 84 WDLDEFYIPVEPITMKNDLNGLG 16
W EF+IP P+T+++D+ G+G
Sbjct: 7941 WASPEFHIPETPVTVQSDMWGMG 7963
>AL110478-4|CAB54346.1| 546|Caenorhabditis elegans Hypothetical
protein Y26D4A.10 protein.
Length = 546
Score = 27.5 bits (58), Expect = 1.4
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 57 QGCKIHPSPSHTTFTK 104
Q CKIHP+ HT F++
Sbjct: 504 QKCKIHPTDDHTNFSR 519
>U64859-1|AAC69092.2| 468|Caenorhabditis elegans Hypothetical
protein R09F10.3 protein.
Length = 468
Score = 27.1 bits (57), Expect = 1.8
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = -2
Query: 182 HTLIYITLNNSYKEMAHC--WSYYSFQVF 102
HT+ +I +NN ++M C W+ +FQ F
Sbjct: 224 HTMCHININNLLEKMIDCGNWNEGNFQTF 252
>Z81119-8|CAB03340.1| 504|Caenorhabditis elegans Hypothetical
protein T10H4.10 protein.
Length = 504
Score = 26.6 bits (56), Expect = 2.4
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +2
Query: 107 PENYNKTNNGPSLYRSCSALYISTYVKSDDPSDDID 214
P NY N S+ R + L +V SDDP D +D
Sbjct: 244 PFNYILELNKKSIARRVAQLKADEHVLSDDPDDFLD 279
>Z92825-4|CAB07312.1| 467|Caenorhabditis elegans Hypothetical
protein C13C4.6 protein.
Length = 467
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 35 FFIVMGSTGM*NSSKSQSHNIHKTPENYNKTNNGPSLYRSCSALYISTYV 184
+FI++ +T + S+ Q + + N GP+ Y++CSA ++S +
Sbjct: 17 WFILLATTALICSNIMQWVSFSAQIDQTNMFFCGPNEYKNCSAAFLSNQI 66
>U23455-6|AAC46536.2| 518|Caenorhabditis elegans Hypothetical
protein F55E10.7 protein.
Length = 518
Score = 26.2 bits (55), Expect = 3.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 194 HQI*HTLIYITLNNSYKEMAHCWSYYSF 111
H I LIYI + +Y + A W +YSF
Sbjct: 334 HNIEIALIYILHSLTYAQSAFNWLFYSF 361
>Z54327-12|CAD56557.1| 543|Caenorhabditis elegans Hypothetical
protein F14F11.1c protein.
Length = 543
Score = 25.8 bits (54), Expect = 4.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 77 KSQSHNIHKTPENYNKTNNGPSLY 148
KS S ++ P N+ N GPS++
Sbjct: 511 KSSSATFNQPPANFKNANGGPSMH 534
>Z54327-11|CAD56556.1| 589|Caenorhabditis elegans Hypothetical
protein F14F11.1b protein.
Length = 589
Score = 25.8 bits (54), Expect = 4.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 77 KSQSHNIHKTPENYNKTNNGPSLY 148
KS S ++ P N+ N GPS++
Sbjct: 557 KSSSATFNQPPANFKNANGGPSMH 580
>Z54307-8|CAD56577.1| 543|Caenorhabditis elegans Hypothetical
protein F14F11.1c protein.
Length = 543
Score = 25.8 bits (54), Expect = 4.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 77 KSQSHNIHKTPENYNKTNNGPSLY 148
KS S ++ P N+ N GPS++
Sbjct: 511 KSSSATFNQPPANFKNANGGPSMH 534
>Z54307-7|CAD56576.1| 589|Caenorhabditis elegans Hypothetical
protein F14F11.1b protein.
Length = 589
Score = 25.8 bits (54), Expect = 4.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 77 KSQSHNIHKTPENYNKTNNGPSLY 148
KS S ++ P N+ N GPS++
Sbjct: 557 KSSSATFNQPPANFKNANGGPSMH 580
>Z54307-5|CAD56575.1| 513|Caenorhabditis elegans Hypothetical
protein F14F11.1g protein.
Length = 513
Score = 25.8 bits (54), Expect = 4.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 77 KSQSHNIHKTPENYNKTNNGPSLY 148
KS S ++ P N+ N GPS++
Sbjct: 481 KSSSATFNQPPANFKNANGGPSMH 504
>Z54307-4|CAD56574.1| 510|Caenorhabditis elegans Hypothetical
protein F14F11.1f protein.
Length = 510
Score = 25.8 bits (54), Expect = 4.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 77 KSQSHNIHKTPENYNKTNNGPSLY 148
KS S ++ P N+ N GPS++
Sbjct: 478 KSSSATFNQPPANFKNANGGPSMH 501
>Z54307-3|CAD56573.1| 516|Caenorhabditis elegans Hypothetical
protein F14F11.1e protein.
Length = 516
Score = 25.8 bits (54), Expect = 4.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 77 KSQSHNIHKTPENYNKTNNGPSLY 148
KS S ++ P N+ N GPS++
Sbjct: 484 KSSSATFNQPPANFKNANGGPSMH 507
>Z54307-2|CAD56572.1| 503|Caenorhabditis elegans Hypothetical
protein F14F11.1d protein.
Length = 503
Score = 25.8 bits (54), Expect = 4.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 77 KSQSHNIHKTPENYNKTNNGPSLY 148
KS S ++ P N+ N GPS++
Sbjct: 471 KSSSATFNQPPANFKNANGGPSMH 494
>Z54307-1|CAA91092.2| 493|Caenorhabditis elegans Hypothetical
protein F14F11.1a protein.
Length = 493
Score = 25.8 bits (54), Expect = 4.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 77 KSQSHNIHKTPENYNKTNNGPSLY 148
KS S ++ P N+ N GPS++
Sbjct: 461 KSSSATFNQPPANFKNANGGPSMH 484
>Z79759-4|CAB02139.2| 395|Caenorhabditis elegans Hypothetical
protein ZK858.4 protein.
Length = 395
Score = 25.4 bits (53), Expect = 5.5
Identities = 7/16 (43%), Positives = 13/16 (81%)
Frame = +3
Query: 66 KIHPSPSHTTFTKHLK 113
+IHP+PSH+ + ++K
Sbjct: 127 RIHPNPSHSDYVSYIK 142
>U67737-1|AAC63596.1| 395|Caenorhabditis elegans MEL-26 protein.
Length = 395
Score = 25.4 bits (53), Expect = 5.5
Identities = 7/16 (43%), Positives = 13/16 (81%)
Frame = +3
Query: 66 KIHPSPSHTTFTKHLK 113
+IHP+PSH+ + ++K
Sbjct: 127 RIHPNPSHSDYVSYIK 142
>AF303255-1|AAG50213.1| 573|Caenorhabditis elegans putative
guanylate-binding protein protein.
Length = 573
Score = 25.4 bits (53), Expect = 5.5
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +2
Query: 92 NIHKTPENYNKTNNGPSLYRS 154
++ ++ ENY K NNG +L++S
Sbjct: 435 DLQESYENYLKVNNGKNLFKS 455
>AC024817-8|AAU05551.1| 535|Caenorhabditis elegans Hypothetical
protein Y54G2A.2b protein.
Length = 535
Score = 25.4 bits (53), Expect = 5.5
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +2
Query: 92 NIHKTPENYNKTNNGPSLYRS 154
++ ++ ENY K NNG +L++S
Sbjct: 435 DLQESYENYLKVNNGKNLFKS 455
>AC024817-7|AAK68527.1| 573|Caenorhabditis elegans Hypothetical
protein Y54G2A.2a protein.
Length = 573
Score = 25.4 bits (53), Expect = 5.5
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +2
Query: 92 NIHKTPENYNKTNNGPSLYRS 154
++ ++ ENY K NNG +L++S
Sbjct: 435 DLQESYENYLKVNNGKNLFKS 455
>Z92827-5|CAB07325.1| 732|Caenorhabditis elegans Hypothetical
protein C29F7.6 protein.
Length = 732
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 74 SKSQSHNIHKTPENYNK 124
++ +HNIH PEN NK
Sbjct: 104 AQCMAHNIHLLPENTNK 120
>U51993-1|AAB36851.2| 377|Caenorhabditis elegans Hypothetical
protein F56F10.2 protein.
Length = 377
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = -3
Query: 103 FVNXXXXXXX*ILHPCRTHHYEKRLKWTRRSVSR 2
FVN ILH C + + ++ +W R +V +
Sbjct: 57 FVNKLFELLTTILHYCMPYLFTQKQQWYRPAVQK 90
>U88168-10|AAC24399.1| 407|Caenorhabditis elegans Hypothetical
protein K11H12.4 protein.
Length = 407
Score = 24.6 bits (51), Expect = 9.6
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = +2
Query: 125 TNNGPSLYRSCSALYISTYVKSDDPS 202
+NN + R +Y++TY+++ DP+
Sbjct: 95 SNNDTTTSRLSGYIYVTTYLQAQDPT 120
>AF016430-11|AAB65375.1| 387|Caenorhabditis elegans Hypothetical
protein C05C8.8 protein.
Length = 387
Score = 24.6 bits (51), Expect = 9.6
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -2
Query: 161 LNNSYKEMAHCWSYYSFQVFCECCVTGTWMNFTS 60
L N +KE H +S + + + CV TW TS
Sbjct: 32 LINVFKEANHSFSIHLYSHKNKDCVVPTWNRVTS 65
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,237,945
Number of Sequences: 27780
Number of extensions: 92017
Number of successful extensions: 279
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 279
length of database: 12,740,198
effective HSP length: 53
effective length of database: 11,267,858
effective search space used: 225357160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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