Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_G12
(398 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical... 29 0.93
U97012-4|AAK39148.1| 340|Caenorhabditis elegans Serpentine rece... 29 1.2
AC084197-9|AAK95894.1| 322|Caenorhabditis elegans Hypothetical ... 29 1.6
AF098996-4|AAC68705.1| 888|Caenorhabditis elegans Hypothetical ... 28 2.1
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 28 2.8
Z70756-12|CAA94796.2| 180|Caenorhabditis elegans Hypothetical p... 27 3.7
U64833-8|AAB04820.1| 432|Caenorhabditis elegans Hypothetical pr... 27 3.7
AF303262-1|AAG50220.1| 362|Caenorhabditis elegans gap junction ... 27 5.0
AF067219-9|AAX88822.1| 266|Caenorhabditis elegans Innexin prote... 27 5.0
AF067219-8|AAC17025.1| 362|Caenorhabditis elegans Innexin prote... 27 5.0
Z75714-6|CAE54930.1| 532|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z75714-5|CAB00065.2| 581|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z66524-3|CAB54303.1| 475|Caenorhabditis elegans Hypothetical pr... 27 6.5
AF098994-5|AAC67473.3| 579|Caenorhabditis elegans Hypothetical ... 27 6.5
AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical ... 27 6.5
Z81465-4|CAB03866.3| 613|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z73898-9|CAA98066.2| 913|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z68159-2|CAD89732.1| 354|Caenorhabditis elegans Hypothetical pr... 26 8.7
AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical ... 26 8.7
AL032646-13|CAA21687.3| 613|Caenorhabditis elegans Hypothetical... 26 8.7
AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical ... 26 8.7
>AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical
protein Y18H1A.9 protein.
Length = 488
Score = 29.5 bits (63), Expect = 0.93
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 207 CCKLFDGNRSMDWEGAMVAR*TRICGERYRG 299
CC+ D NR+ DW V T C E Y+G
Sbjct: 269 CCQGVDLNRNFDWFFGQVGSSTDPCSEIYQG 299
>U97012-4|AAK39148.1| 340|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 16 protein.
Length = 340
Score = 29.1 bits (62), Expect = 1.2
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +1
Query: 100 SAWSRDISYDYRNITILKIRFDHNNFKAMGNCCASCVVNFLTGIVLWT 243
S WS IS+ YR + + K F NN + A +FL + WT
Sbjct: 108 SIWSLLISFAYRYLILFKTTFKRNNILLV--ILAFYFPSFLQAVTYWT 153
>AC084197-9|AAK95894.1| 322|Caenorhabditis elegans Hypothetical
protein Y73B6BL.29 protein.
Length = 322
Score = 28.7 bits (61), Expect = 1.6
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 88 ISRGSAWSRDIS-YDYRNITILKIRFDHNNFKAMGNCCASCVVNF 219
+S+G A+S + YDY N+TI+ F + M SC+VN+
Sbjct: 221 LSKGEAYSMENDIYDYYNVTIVAKSFVREQIRRM----MSCLVNY 261
>AF098996-4|AAC68705.1| 888|Caenorhabditis elegans Hypothetical
protein T11F1.8 protein.
Length = 888
Score = 28.3 bits (60), Expect = 2.1
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = +1
Query: 94 RGSAWSRDISYDYRNITILKIRFDHNNFKAMGNCCASCVVNFLTGIV--LWTG-KGLWLL 264
RG + D +Y+N T+L +NF ++ A V F+ G V W G K L L
Sbjct: 624 RGDLITTDNIQEYQNCTVLNGGLRLSNFTSVDQLTALSEVTFIKGDVEISWNGFKDLSFL 683
Query: 265 AKL 273
KL
Sbjct: 684 GKL 686
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 27.9 bits (59), Expect = 2.8
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -1
Query: 389 PVIALAVARAM--LLPASTLPVKAIADALRLPATIPLAANPSLASNHSPFPVHRTIPVK 219
P +AL +R LL S LP+ + A R + P N SN+SP P ++IP++
Sbjct: 818 PNVALPSSRPSKTLLTPSELPIISNLPASRQSTSAPSVPN---VSNNSPSPPSQSIPIE 873
>Z70756-12|CAA94796.2| 180|Caenorhabditis elegans Hypothetical
protein T06E4.10 protein.
Length = 180
Score = 27.5 bits (58), Expect = 3.7
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = -1
Query: 389 PVIALAVARAMLLPASTLPVKAIADALRLPATIP---LAANPSLASNHSPFPVHRTIP 225
P A A+ PA P A A L PA P +AA P+LA ++P PV P
Sbjct: 51 PAYAPALGAPAYAPALAAP--AYAPGLAAPAFAPAPVVAAAPALAPAYAPAPVVAAAP 106
>U64833-8|AAB04820.1| 432|Caenorhabditis elegans Hypothetical
protein B0507.3 protein.
Length = 432
Score = 27.5 bits (58), Expect = 3.7
Identities = 17/69 (24%), Positives = 30/69 (43%)
Frame = -1
Query: 398 LITPVIALAVARAMLLPASTLPVKAIADALRLPATIPLAANPSLASNHSPFPVHRTIPVK 219
+I P L + PAS PV + P A PSL +++ P + P +
Sbjct: 144 VIPPPPTLVTGPLKVAPASLAPVPMEIQSQEQPIKKSPAPTPSLDASNKPVAALASTPQQ 203
Query: 218 KFTTQEAQQ 192
K +T++ ++
Sbjct: 204 KESTKKTEK 212
>AF303262-1|AAG50220.1| 362|Caenorhabditis elegans gap junction
innexin protein.
Length = 362
Score = 27.1 bits (57), Expect = 5.0
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +2
Query: 152 RFDSIITILKQWGTVALLVL*TF*RESFYGLGRGYGCSLNSDLRREVSWLEVSKHPR 322
R + I K T+ + + F + F GLG YG ++ D+ + W E PR
Sbjct: 179 RLTTCILATKFLATILIFISMGF-LDYFMGLGPMYGWTITKDILQGRQWQESGSFPR 234
>AF067219-9|AAX88822.1| 266|Caenorhabditis elegans Innexin protein
17, isoform b protein.
Length = 266
Score = 27.1 bits (57), Expect = 5.0
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +2
Query: 152 RFDSIITILKQWGTVALLVL*TF*RESFYGLGRGYGCSLNSDLRREVSWLEVSKHPR 322
R + I K T+ + + F + F GLG YG ++ D+ + W E PR
Sbjct: 179 RLTTCILATKFLATILIFISMGF-LDYFMGLGPMYGWTITKDILQGRQWQESGSFPR 234
>AF067219-8|AAC17025.1| 362|Caenorhabditis elegans Innexin protein
17, isoform a protein.
Length = 362
Score = 27.1 bits (57), Expect = 5.0
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +2
Query: 152 RFDSIITILKQWGTVALLVL*TF*RESFYGLGRGYGCSLNSDLRREVSWLEVSKHPR 322
R + I K T+ + + F + F GLG YG ++ D+ + W E PR
Sbjct: 179 RLTTCILATKFLATILIFISMGF-LDYFMGLGPMYGWTITKDILQGRQWQESGSFPR 234
>Z75714-6|CAE54930.1| 532|Caenorhabditis elegans Hypothetical
protein ZC434.9b protein.
Length = 532
Score = 26.6 bits (56), Expect = 6.5
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +3
Query: 207 CCKLFDGNRSMDWEGAMVAR*TRICGERYRG 299
CC D NR+ DW T C E Y+G
Sbjct: 280 CCGGVDLNRNYDWHFGETGSSTDKCSEIYQG 310
>Z75714-5|CAB00065.2| 581|Caenorhabditis elegans Hypothetical
protein ZC434.9a protein.
Length = 581
Score = 26.6 bits (56), Expect = 6.5
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +3
Query: 207 CCKLFDGNRSMDWEGAMVAR*TRICGERYRG 299
CC D NR+ DW T C E Y+G
Sbjct: 280 CCGGVDLNRNYDWHFGETGSSTDKCSEIYQG 310
>Z66524-3|CAB54303.1| 475|Caenorhabditis elegans Hypothetical
protein T13H5.6 protein.
Length = 475
Score = 26.6 bits (56), Expect = 6.5
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -1
Query: 302 PATIPLAANPSLASNHSPFPV 240
P IPL+++PS+ N S +PV
Sbjct: 447 PNEIPLSSDPSVVENESNYPV 467
>AF098994-5|AAC67473.3| 579|Caenorhabditis elegans Hypothetical
protein T06A4.1a protein.
Length = 579
Score = 26.6 bits (56), Expect = 6.5
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 6/46 (13%)
Frame = +3
Query: 204 LCCKLFDGNRSMDWEGAMVAR*TRICGERYRGW------KSQSIRD 323
+CC D NR+ DW A + C + Y G +SQ++RD
Sbjct: 262 VCCSGVDLNRNFDWFWASTGSSSDPCHDTYHGSAAFSEPESQAVRD 307
>AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical
protein T06A4.1b protein.
Length = 606
Score = 26.6 bits (56), Expect = 6.5
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 6/46 (13%)
Frame = +3
Query: 204 LCCKLFDGNRSMDWEGAMVAR*TRICGERYRGW------KSQSIRD 323
+CC D NR+ DW A + C + Y G +SQ++RD
Sbjct: 262 VCCSGVDLNRNFDWFWASTGSSSDPCHDTYHGSAAFSEPESQAVRD 307
>Z81465-4|CAB03866.3| 613|Caenorhabditis elegans Hypothetical
protein Y54E2A.1 protein.
Length = 613
Score = 26.2 bits (55), Expect = 8.7
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +1
Query: 115 DISYDYRNITILKIRFDHNNFKAMGNCCASCVVNFLTGIVLWTGKGLWLLAKLGFAARGI 294
D ++D+ N+T + H K + C + C V T T + L+ +A GF +
Sbjct: 23 DETFDWSNMTAMDCNCTHPLHKYLEVCISRCTVPDDTVFFSMTDEELFEIALPGFLYLTV 82
Query: 295 -VAGSLKASAMAFTGN 339
+ G++ S + F N
Sbjct: 83 FLVGTIGNSMVIFVVN 98
>Z73898-9|CAA98066.2| 913|Caenorhabditis elegans Hypothetical
protein ZK822.1 protein.
Length = 913
Score = 26.2 bits (55), Expect = 8.7
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 301 QPRYLSPQIRV*RATIAPSQSIERFPSKSLQH 206
+PR L PQ + R T +P +S R P+ S +H
Sbjct: 867 RPRTLEPQTSIPRITTSPPES--RIPTPSSRH 896
>Z68159-2|CAD89732.1| 354|Caenorhabditis elegans Hypothetical
protein C33D9.3a protein.
Length = 354
Score = 26.2 bits (55), Expect = 8.7
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 318 GCFETSSHDTSRRKSEFSEQP*PLPSP*NDSRQKVYNTRSATVPHCFK 175
GC ET+S ++ RKS+ S+ PL SP ++ S T C K
Sbjct: 72 GCPETTSFSSTSRKSKSSKSS-PLASPTRLVASELNRNVSKTYSDCEK 118
>AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical
protein Y43D4A.5 protein.
Length = 1648
Score = 26.2 bits (55), Expect = 8.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 305 LPATIPLAANPSLASNHSPFP 243
L T+P AA PS +H PFP
Sbjct: 958 LGPTLPPAAAPSKPGSHEPFP 978
>AL032646-13|CAA21687.3| 613|Caenorhabditis elegans Hypothetical
protein Y54E2A.1 protein.
Length = 613
Score = 26.2 bits (55), Expect = 8.7
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +1
Query: 115 DISYDYRNITILKIRFDHNNFKAMGNCCASCVVNFLTGIVLWTGKGLWLLAKLGFAARGI 294
D ++D+ N+T + H K + C + C V T T + L+ +A GF +
Sbjct: 23 DETFDWSNMTAMDCNCTHPLHKYLEVCISRCTVPDDTVFFSMTDEELFEIALPGFLYLTV 82
Query: 295 -VAGSLKASAMAFTGN 339
+ G++ S + F N
Sbjct: 83 FLVGTIGNSMVIFVVN 98
>AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical
protein Y39H10A.6 protein.
Length = 684
Score = 26.2 bits (55), Expect = 8.7
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 272 SDLRREVSWLEVSKHPRWLL 331
SDL++E WL + P W+L
Sbjct: 661 SDLKQEQEWLNQAARPDWIL 680
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,066,396
Number of Sequences: 27780
Number of extensions: 181448
Number of successful extensions: 505
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 505
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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