Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_G12
         (398 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   5.2  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   5.2  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          20   9.1  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      20   9.1  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 123 LRLSKYYHIKDSIR 164
           + L +Y HIKD +R
Sbjct: 119 ISLDRYIHIKDPLR 132



 Score = 20.6 bits (41), Expect = 6.9
 Identities = 11/41 (26%), Positives = 18/41 (43%)
 Frame = +1

Query: 214 NFLTGIVLWTGKGLWLLAKLGFAARGIVAGSLKASAMAFTG 336
           N L  + ++T +GL  +  L  A+  I    +    M F G
Sbjct: 43  NILVCVAIYTDRGLRRIGNLFLASLAIADLFVGCLVMTFAG 83


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 301 GSLKASAMAFTGNVEAGSNIARATASAM 384
           GSL+A+A    GN     NI   T S++
Sbjct: 395 GSLQAAARKLLGNAPEVENIWDYTPSSL 422


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = -1

Query: 260 NHSPFPVHRTIPVKK 216
           NH PF  H TI   K
Sbjct: 496 NHKPFNFHITINADK 510


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = -1

Query: 260 NHSPFPVHRTIPVKK 216
           NH PF  H TI   K
Sbjct: 496 NHKPFNFHITINADK 510


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,494
Number of Sequences: 438
Number of extensions: 2548
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9885360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)