Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_G11
(275 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC005187-1|AAH05187.1| 167|Homo sapiens ubiquitin-fold modifier... 84 9e-17
AL590714-1|CAH72141.1| 167|Homo sapiens ubiquitin-fold modifier... 84 9e-17
AF151884-1|AAD34121.1| 167|Homo sapiens CGI-126 protein protein. 84 9e-17
AB154405-1|BAD15374.1| 167|Homo sapiens Ufm1-conjugating enzyme... 84 9e-17
AY496267-1|AAS45470.1| 1165|Homo sapiens RhoGTPase regulating pr... 28 4.6
AY496266-1|AAS45469.1| 1168|Homo sapiens RhoGTPase regulating pr... 28 4.6
AY496265-1|AAS45468.1| 1155|Homo sapiens RhoGTPase regulating pr... 28 4.6
AY496264-1|AAS45467.1| 1155|Homo sapiens RhoGTPase regulating pr... 28 4.6
AY496263-1|AAS45466.1| 1191|Homo sapiens RhoGTPase regulating pr... 28 4.6
AB037812-1|BAA92629.1| 1194|Homo sapiens KIAA1391 protein protein. 28 4.6
>BC005187-1|AAH05187.1| 167|Homo sapiens ubiquitin-fold modifier
conjugating enzyme 1 protein.
Length = 167
Score = 83.8 bits (198), Expect = 9e-17
Identities = 36/51 (70%), Positives = 44/51 (86%)
Frame = +3
Query: 123 MVDASTKRTLSSIPLLQTKAGPRDKELWVNRLKEEYQALIKYVENNKAADN 275
M D +T+R +S IP+L+T AGPRD+ELWV RLKEEYQ+LI+YVENNK ADN
Sbjct: 1 MADEATRRVVSEIPVLKTNAGPRDRELWVQRLKEEYQSLIRYVENNKNADN 51
>AL590714-1|CAH72141.1| 167|Homo sapiens ubiquitin-fold modifier
conjugating enzyme 1 protein.
Length = 167
Score = 83.8 bits (198), Expect = 9e-17
Identities = 36/51 (70%), Positives = 44/51 (86%)
Frame = +3
Query: 123 MVDASTKRTLSSIPLLQTKAGPRDKELWVNRLKEEYQALIKYVENNKAADN 275
M D +T+R +S IP+L+T AGPRD+ELWV RLKEEYQ+LI+YVENNK ADN
Sbjct: 1 MADEATRRVVSEIPVLKTNAGPRDRELWVQRLKEEYQSLIRYVENNKNADN 51
>AF151884-1|AAD34121.1| 167|Homo sapiens CGI-126 protein protein.
Length = 167
Score = 83.8 bits (198), Expect = 9e-17
Identities = 36/51 (70%), Positives = 44/51 (86%)
Frame = +3
Query: 123 MVDASTKRTLSSIPLLQTKAGPRDKELWVNRLKEEYQALIKYVENNKAADN 275
M D +T+R +S IP+L+T AGPRD+ELWV RLKEEYQ+LI+YVENNK ADN
Sbjct: 1 MADEATRRVVSEIPVLKTNAGPRDRELWVQRLKEEYQSLIRYVENNKNADN 51
>AB154405-1|BAD15374.1| 167|Homo sapiens Ufm1-conjugating enzyme 1
protein.
Length = 167
Score = 83.8 bits (198), Expect = 9e-17
Identities = 36/51 (70%), Positives = 44/51 (86%)
Frame = +3
Query: 123 MVDASTKRTLSSIPLLQTKAGPRDKELWVNRLKEEYQALIKYVENNKAADN 275
M D +T+R +S IP+L+T AGPRD+ELWV RLKEEYQ+LI+YVENNK ADN
Sbjct: 1 MADEATRRVVSEIPVLKTNAGPRDRELWVQRLKEEYQSLIRYVENNKNADN 51
>AY496267-1|AAS45470.1| 1165|Homo sapiens RhoGTPase regulating
protein variant ARHGAP20-1be protein.
Length = 1165
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 156 SIPLLQTKAGPRDKELWVNRLKEE 227
S+P+L RD +LWVN KEE
Sbjct: 203 SLPMLGITGSERDYQLWVNSGKEE 226
>AY496266-1|AAS45469.1| 1168|Homo sapiens RhoGTPase regulating
protein variant ARHGAP20-1c protein.
Length = 1168
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 156 SIPLLQTKAGPRDKELWVNRLKEE 227
S+P+L RD +LWVN KEE
Sbjct: 206 SLPMLGITGSERDYQLWVNSGKEE 229
>AY496265-1|AAS45468.1| 1155|Homo sapiens RhoGTPase regulating
protein variant ARHGAP20-1e protein.
Length = 1155
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 156 SIPLLQTKAGPRDKELWVNRLKEE 227
S+P+L RD +LWVN KEE
Sbjct: 193 SLPMLGITGSERDYQLWVNSGKEE 216
>AY496264-1|AAS45467.1| 1155|Homo sapiens RhoGTPase regulating
protein variant ARHGAP20-1d protein.
Length = 1155
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 156 SIPLLQTKAGPRDKELWVNRLKEE 227
S+P+L RD +LWVN KEE
Sbjct: 193 SLPMLGITGSERDYQLWVNSGKEE 216
>AY496263-1|AAS45466.1| 1191|Homo sapiens RhoGTPase regulating
protein variant ARHGAP20-1ad protein.
Length = 1191
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 156 SIPLLQTKAGPRDKELWVNRLKEE 227
S+P+L RD +LWVN KEE
Sbjct: 229 SLPMLGITGSERDYQLWVNSGKEE 252
>AB037812-1|BAA92629.1| 1194|Homo sapiens KIAA1391 protein protein.
Length = 1194
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 156 SIPLLQTKAGPRDKELWVNRLKEE 227
S+P+L RD +LWVN KEE
Sbjct: 232 SLPMLGITGSERDYQLWVNSGKEE 255
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,290,738
Number of Sequences: 237096
Number of extensions: 601071
Number of successful extensions: 818
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 818
length of database: 76,859,062
effective HSP length: 69
effective length of database: 60,499,438
effective search space used: 1330987636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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