Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_G09
         (339 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.       25   0.59 
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    21   9.6  

>DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.
          Length = 353

 Score = 25.4 bits (53), Expect = 0.59
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +3

Query: 24 EKESVERALKLDRELRVNG 80
          +KE++ER+  +DR LR +G
Sbjct: 8  DKEAIERSKNIDRALRADG 26


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 95   DGDEEPVDAELAVQLQ 48
            +GDE P+D EL +  +
Sbjct: 1240 EGDEGPLDGELIIHAE 1255


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,746
Number of Sequences: 2352
Number of extensions: 878
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 24206952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)